Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0017 ATGTTGTCAAAGATTGTGCTAGTTTGGAAGATTTACCTGCTGAATTTTAGGATGAGGTGGATGGCGGGTCTCACTTTTCCCCTGTTTGCTCAGATTTTGATTATTTTGATTCTTTCTCCGGCGGAGTCAAGCACATACTGGGGCGATATAGAGGCCCTGAAGCAACTAAAGAATGGGCTTCACAGTGCTTCGGTGAATCCAGGTTCTTGTGTTAGTTCATGGGACTTCTCCGTAGACCCCTGCGACAACCTGTTCAGCCAAAAATTCACGTGCGGCTTCCGATGCGACGCCGTCATCTCCGGGTGGAGTCGGGTCACCGAAATCAGTCTGGACCAGGTGGGCTACGCGGGCTCACTCCCTTCCTCGTCTTGGAACCTCCCTTACTTACAAACTCTCGATGTCTCTAACAACTACCTTTCCGGTGGCATTCCCGATTCCTTCTCCAACCTCACCCGCCTTCGCCGCCTCTCTCTCTCCGGGAATCTGTTGGGCGGTGAGATTCCCTCTTCCATTGGCTTCCTCTCCAATCTCCAAGAGCTTTACCTTGATAACAACAATCTTCAAGGGCCGATCCCTTCTACCTTCAACTGCCTCAACAGCTTGCAAAGGCTCCAACTTCAGCTCAACAATCTCACGGGTCACATTCCTCATCTTGCTTCCCTCCAAAACCTTAACTATCTCGACCTCAGCGACAACGCCGTCACCGGCGGAATTCCGTCGACCCTGCCCAGATCCTTGGTTCAGATCTCAATTAGGAACAATAGCTTGAGCGGGGGCTTGAGATCGGAAAGCTTCAGGGGCATGATGGATTTGCAGGTGTTGGATTTGAGTTATAACAGCCTGAAGGACTCTGTGCCCGTAGTTCTGTTTGAGCTGCCTTCGCTGGAGCAGCTGACACTGTCGTTCAACAAATTGTCGTCCATGGAACCTCCATCTTACAGTGTGGGATCACAGAGTGGGCTCATAGCGGTTGATCTGAGCAACAACGAGATTGAAGGGTTGTTGCCTTGGTTCATGGGAGTGATGCCCAAGCTGTCGGCATTGTCGTTGGAGAACAATAGGTTCACGGGAATGATTCCTACGCAGTACGCATTGAAGACGGTGTTGCCGGAATTGGGAGTATCGCCGTTTGGGAGGCTCATACTGAACGGCAATTACCTGATAGGGGGCATACCAAGCCCCTTGCTTCTGCTCAGGCCTGGTTCTGCAAATGTGACATTAGCGGATAATTGTTTGTTCAGATGCCCACTCAGGTTCTTCTTCTGCGACCAACAAAAATCGGTCGACGTCTGCAACAGATTTAGCCCCTTCATCCCTTAG 1320 0.5083 MLSKIVLVWKIYLLNFRMRWMAGLTFPLFAQILIILILSPAESSTYWGDIEALKQLKNGLHSASVNPGSCVSSWDFSVDPCDNLFSQKFTCGFRCDAVISGWSRVTEISLDQVGYAGSLPSSSWNLPYLQTLDVSNNYLSGGIPDSFSNLTRLRRLSLSGNLLGGEIPSSIGFLSNLQELYLDNNNLQGPIPSTFNCLNSLQRLQLQLNNLTGHIPHLASLQNLNYLDLSDNAVTGGIPSTLPRSLVQISIRNNSLSGGLRSESFRGMMDLQVLDLSYNSLKDSVPVVLFELPSLEQLTLSFNKLSSMEPPSYSVGSQSGLIAVDLSNNEIEGLLPWFMGVMPKLSALSLENNRFTGMIPTQYALKTVLPELGVSPFGRLILNGNYLIGGIPSPLLLLRPGSANVTLADNCLFRCPLRFFFCDQQKSVDVCNRFSPFIP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0017 439 PRINTS Leucine-rich repeat signature 271 284 - -
Mibi10g0017 439 PRINTS Leucine-rich repeat signature 292 305 - -
Mibi10g0017 439 Gene3D Ribonuclease Inhibitor 48 216 IPR032675 -
Mibi10g0017 439 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 33 426 - -
Mibi10g0017 439 FunFam Nuclear pore complex protein NUP107 47 217 - -
Mibi10g0017 439 Pfam Leucine rich repeat 118 163 IPR001611 GO:0005515
Mibi10g0017 439 Pfam Leucine rich repeat 244 305 IPR001611 GO:0005515
Mibi10g0017 439 Pfam Leucine rich repeat 175 233 IPR001611 GO:0005515
Mibi10g0017 439 SMART LRR_typ_2 292 315 IPR003591 -
Mibi10g0017 439 SMART LRR_typ_2 126 149 IPR003591 -
Mibi10g0017 439 SMART LRR_typ_2 150 172 IPR003591 -
Mibi10g0017 439 SMART LRR_typ_2 221 249 IPR003591 -
Mibi10g0017 439 SMART LRR_typ_2 342 365 IPR003591 -
Mibi10g0017 439 SMART LRR_typ_2 174 197 IPR003591 -
Mibi10g0017 439 Gene3D Ribonuclease Inhibitor 217 432 IPR032675 -
Mibi10g0017 439 SUPERFAMILY L domain-like 91 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0017 Mibi-ChrMibi10 383713 386859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0017 116 439 Receptor kinase-like Gene Family AT2G25790 32.055 2.00e-27 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0017 10 383713 386859 Mibi10g0017 10 383713 386859 ECH