Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2345 ATGGTGCTTTCCGCTTCCTCCTCCTCCTCCTCCTCTTCTGTAATCTCTCACTCCTCCCGCATTTTCCATGCCCACACTCTCCTTCACCATCACCCCCACACCTTCCAATCTCAATGCCGTCCTTTTCCCCTCTCCCACCGTCCTCCCCATCTCCTTCGAAAGAGTCTTGCTTCACCCCGGGGAAGACAAACGCCAAACAGTAGGATATGTGCTTCACTTGCAGATGTTTCGCTGGATGTATCTGTAAAAGAAAAACAACTTCCCAAGGGAGAAACTTGGTCTGTTCACAAATTTGGAGGAACCTGTGTGGGAACTGCTTTAAGAATTAAAAATGTTGCAGATATCATAATCAATGATGATTCAGAGAGGAAAGTTGTTGTTGTCTCTGCTATGTCAAAGGTGACAGATATGATGTATGACCTTATTCACAAGGCTCAAGCACGTGATGAGTCCTATATATCTGCACTAGATGCTGTTTTAGAGAAGCACAACTCTGCTGCTCATGAAATACTTGACGGAGATGAACTTGCTCTTTTCTTATCCAAGTTGCGTGAGGACATCAATAACCTTAAGGCAATGCTTCGTGCAATTTACATAGCTGGTCATGCAACAGAATCCTTTACAGACTTTGTAGTGGGTCATGGGGAGTTATGGTCTGCGCATATGTTGTCTTCGGTTATTCGGAAGAATGGAATTGACTGCAAATGGATGGATGCAAGAGAAGTCCTGGTTGTAAGTCCGACTAGTTCTAACCAGGTTGATCCGGACTATTTGGAGTCTGGGCGAAGACTTGAGAAATGGTACTCTATGAATCCATCCAAGGTTATCATTGCTACTGGATTTATTGCAAGTACACCTCAAAATATACCCACCACACTTAAGAGAGATGGAAGCGATTTTTCAGCAGCAATTATGGGTGCTCTCTTCAAGGCTCGCCAGGTCACAATTTGGACAGATGTTGATGGCGTCTATAGTGCAGATCCTAGAAAAGTTAGCGAGGCTGTAATTTTAAAGACATTATCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCAAATGTTTTACATCCACGTACAATTATTCCAGTGATGCAGTATGACATACCCATTATAATTAGAAACATTTTCAACCTCTCTTCCCCTGGAACAAAGATTTGCCGCTCCTCTAGCAATGGTGATGAAGATATACAGAACTTCAGTCATTTTGTTAAAGGGTTTGCAACAATAGACAACTTAGCACTTGTTAACGTTGAGGGAACTGGAATGGCCGGTGTTCCAGGGACAGCCAGTGCTATTTTTTCTGCTGTAAAAGATGTTGGAGCTAATGTTATCATGATTTCTCAGGCTAGTAGTGAACATTCCATATGCTTCGCTGTACCTGAGAAGGAAGTAAAAGCTGTTGCTGAAGCATTACAATCTAAATTTCGTCAAGCTTTGGATGCTGGGCGTCTATCACAGGTCGCAGTAATTCAAAATTGTAGCATTTTGGCTGCTGTTGGCCAGAAGATGGCAAGTACTCCTGGAGTTAGTGCTTCCCTATTCAATGCATTAGCTAAGGCGAATATCAATGTCCGTGCTATAGCACAAGGTTGTACTGAGTACAACATTACTGTTGTTGTTAAGCGGGAAGATTGTATCAAGGCTCTTCGAGCTGTTCATTCAAGATTTTATCTCTCAAGAACCACTTTAGCAATGGGCATCATTGGACCTGGTTTGATTGGGAGTACACTTCTTGACCAACTAAGGGATCAGGCTGCTGTTTTGAAAGAAGAATATAACATTGATTTGCGTGTATTGGGCATCATTGGTTCGAAGTCAATGATTCTTAGTGATCTGGGTATTGACTTAGCTAAGTGGAAAGATATTCGGGATGAAAGAGGAGAAGAGGCTAATTTGGAAAAATTTGTTCAACATGTGCATGGAAATCATTTTATACCAAACACAGTTTTAGTGGACTGCACAGCTGACTCCATCATTGCAGGACATTACTATGACTGGTTATGTAAAGGAATACATATAATCACCCCCAACAAAAAGGCGAATTCAGGACCACTTGATCAGTATTTGAAGTTAAGAGCTCTTCAAAGACAATCCTATACTCATTACTTCTATGAAGCCACCGTCGGAGCTGGTCTTCCCATCATGAACACTTTACAAGGCCTCCTTGTTTCTGGAGACAGAATATTGCAAATTGAAGGCATTTTCAGTGGGACCTTGAGCTACATCTTTAATAACTTCAAAGATGGTCGGCTTTTTAGTGAGGTAGTTACTGAAGCAAAGGAAGCAGGTTATACTGAGCCAGATCCAAGGGATGATCTTTCTGGAACAGATGTTGCTAGAAAGGTTATAATTCTTGCACGGGAATGTGGTCTAAAGCTTGAACTATCTGATATTTCTGTTGAGAGCCTTGTGCCAGAACCGCTAAGAGCGAGTGCTTCAGCTCAGGAATTTATGCAACAACTGCCTAAATTTGACAAAGACATGATGAAGAAACAACAGGATGCTGATAATTCTGGGGAAGTTCTGAGGTATGTTGGGGTGGTGGATGTGAAGAATGAAAAAGGAGTGGTTGAGCTGCGAAGATACAAAAAGGATCATCCATTTGCACAACTGTCTGGGTCAGATAACATTATTGCATTCACAACAAGAAGGTATAATCAGCAGCCTCTCATAGTTCGCGGACCAGGAGCCGGTGCTCAAGTCACAGCTGGCGGCGTATTCAACGACATTTTACGTCTTGCCTCATACCTTGGTGCCCCATCATAG 2769 0.4236 MVLSASSSSSSSSVISHSSRIFHAHTLLHHHPHTFQSQCRPFPLSHRPPHLLRKSLASPRGRQTPNSRICASLADVSLDVSVKEKQLPKGETWSVHKFGGTCVGTALRIKNVADIIINDDSERKVVVVSAMSKVTDMMYDLIHKAQARDESYISALDAVLEKHNSAAHEILDGDELALFLSKLREDINNLKAMLRAIYIAGHATESFTDFVVGHGELWSAHMLSSVIRKNGIDCKWMDAREVLVVSPTSSNQVDPDYLESGRRLEKWYSMNPSKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGALFKARQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMQYDIPIIIRNIFNLSSPGTKICRSSSNGDEDIQNFSHFVKGFATIDNLALVNVEGTGMAGVPGTASAIFSAVKDVGANVIMISQASSEHSICFAVPEKEVKAVAEALQSKFRQALDAGRLSQVAVIQNCSILAAVGQKMASTPGVSASLFNALAKANINVRAIAQGCTEYNITVVVKREDCIKALRAVHSRFYLSRTTLAMGIIGPGLIGSTLLDQLRDQAAVLKEEYNIDLRVLGIIGSKSMILSDLGIDLAKWKDIRDERGEEANLEKFVQHVHGNHFIPNTVLVDCTADSIIAGHYYDWLCKGIHIITPNKKANSGPLDQYLKLRALQRQSYTHYFYEATVGAGLPIMNTLQGLLVSGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARECGLKLELSDISVESLVPEPLRASASAQEFMQQLPKFDKDMMKKQQDADNSGEVLRYVGVVDVKNEKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYNQQPLIVRGPGAGAQVTAGGVFNDILRLASYLGAPS 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2345 922 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 401 559 - -
Mibi09g2345 922 FunFam Probable aspartokinase 398 479 - -
Mibi09g2345 922 SUPERFAMILY Carbamate kinase-like 94 388 IPR036393 -
Mibi09g2345 922 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 565 741 - -
Mibi09g2345 922 Pfam Amino acid kinase family 94 375 IPR001048 -
Mibi09g2345 922 ProSitePatterns Aspartokinase signature. 95 103 IPR018042 GO:0004072|GO:0008652
Mibi09g2345 922 Gene3D - 401 559 - -
Mibi09g2345 922 Gene3D - 93 389 IPR036393 -
Mibi09g2345 922 CDD AAK_AK-HSDH 93 387 IPR041743 -
Mibi09g2345 922 SUPERFAMILY ACT-like 402 477 IPR045865 -
Mibi09g2345 922 ProSitePatterns Homoserine dehydrogenase signature. 760 782 IPR019811 GO:0006520
Mibi09g2345 922 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 714 899 - -
Mibi09g2345 922 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 92 389 - -
Mibi09g2345 922 PANTHER - 76 922 IPR011147 GO:0004072|GO:0004412|GO:0009067
Mibi09g2345 922 TIGRFAM asp_kinases: aspartate kinase 93 557 IPR001341 GO:0004072|GO:0008652
Mibi09g2345 922 Pfam Homoserine dehydrogenase, NAD binding domain 570 706 IPR005106 GO:0016491|GO:0050661
Mibi09g2345 922 CDD ACT_AKi-HSDH-ThrA-like_1 413 491 - -
Mibi09g2345 922 Pfam ACT domain 492 555 IPR027795 -
Mibi09g2345 922 Gene3D Dihydrodipicolinate Reductase; domain 2 725 896 - -
Mibi09g2345 922 ProSiteProfiles ACT domain profile. 418 490 IPR002912 -
Mibi09g2345 922 SUPERFAMILY ACT-like 484 573 IPR045865 -
Mibi09g2345 922 Pfam ACT domain 422 474 IPR002912 -
Mibi09g2345 922 CDD ACT_AKi-HSDH-ThrA_2 494 559 - -
Mibi09g2345 922 Gene3D - 566 914 - -
Mibi09g2345 922 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 562 736 IPR036291 -
Mibi09g2345 922 ProSiteProfiles ACT domain profile. 499 576 IPR002912 -
Mibi09g2345 922 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 725 896 - -
Mibi09g2345 922 Pfam Homoserine dehydrogenase 714 912 IPR001342 GO:0006520
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2345 Mibi-ChrMibi09 42941905 42950236 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g2345 09 42941905 42950236 Mibi09g2345 09 42941905 42950236 ECH