Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1685 ATGTCTTGTCCACATCAGAACTCAGAAGTTAGCAAACCTTGCTCGCCAAGACACGTGAACCTCCCAATATTCGTGGGGCCCACACTCTCCTTCTTCCCCCCCTATATTACTGGAAAAACAATTCCTTGCCTTTCGCCATTCACAAATCTCGAATACCTCTTTTTTGTTCTCTCTCTCTCTCCCACCTTCCCCCCAAAAAATCAAAAATCCCTAACTCCTCCTTCTCTCTCCTCCATCCATCCCTCCATGTGTCCCTCCGGCCGCTCTCTCTCTCCTCCCTCCGCCGCCGACCCCTCCTTCCGTCCAGCATTCGACGTCCTCGATTCCGACCACGACGGAAAGATCAGCCGCGACGATCTTCGAGCATTTTACGCCGCCAGGGACGCCGCCGCCGACATCGACGACGACCTGATCGGGACGATGATGACGGTGGCGGACACAAACAAGGACGGCTTCGTGGAGTACGATGAGTTCGAGACGGTGGTTCTGGGAAAGAAGAACGGATCTGTTAGCTCGACGACGACGTCGTTTTTTAAGGAGATGTTTAAAATGATGGATACGGACGGTGATGGCTGGCTTAGTCACCGGGATCTTAAAAGCTTCATGGAAATGGCTGGTCTTAACGTCACTGATGATGATATTGATGCTATGATTTTGTTGGCTGGTGGTGATCGAAACGGCGGCGTTTCGTTTGAAGGCTTGCATGGGATTTTGATGATGAGTCGTTGA 729 0.5158 MSCPHQNSEVSKPCSPRHVNLPIFVGPTLSFFPPYITGKTIPCLSPFTNLEYLFFVLSLSPTFPPKNQKSLTPPSLSSIHPSMCPSGRSLSPPSAADPSFRPAFDVLDSDHDGKISRDDLRAFYAARDAAADIDDDLIGTMMTVADTNKDGFVEYDEFETVVLGKKNGSVSSTTTSFFKEMFKMMDTDGDGWLSHRDLKSFMEMAGLNVTDDDIDAMILLAGGDRNGGVSFEGLHGILMMSR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1685 242 ProSiteProfiles EF-hand calcium-binding domain profile. 133 168 IPR002048 GO:0005509
Mibi09g1685 242 ProSitePatterns EF-hand calcium-binding domain. 146 158 IPR018247 -
Mibi09g1685 242 PANTHER CALCIUM BINDING PROTEIN 178 232 - -
Mibi09g1685 242 CDD EFh 178 232 IPR002048 GO:0005509
Mibi09g1685 242 CDD EFh 100 158 IPR002048 GO:0005509
Mibi09g1685 242 Gene3D - 86 163 - -
Mibi09g1685 242 ProSiteProfiles EF-hand calcium-binding domain profile. 103 130 IPR002048 GO:0005509
Mibi09g1685 242 Pfam EF-hand domain pair 179 234 IPR002048 GO:0005509
Mibi09g1685 242 Pfam EF-hand domain pair 100 161 IPR002048 GO:0005509
Mibi09g1685 242 FunFam Calmodulin-2 A 94 242 - -
Mibi09g1685 242 Gene3D - 166 242 - -
Mibi09g1685 242 SUPERFAMILY EF-hand 100 239 IPR011992 -
Mibi09g1685 242 ProSiteProfiles EF-hand calcium-binding domain profile. 173 208 IPR002048 GO:0005509
Mibi09g1685 242 MobiDBLite consensus disorder prediction 67 96 - -
Mibi09g1685 242 ProSitePatterns EF-hand calcium-binding domain. 108 120 IPR018247 -
Mibi09g1685 242 ProSitePatterns EF-hand calcium-binding domain. 186 198 IPR018247 -
Mibi09g1685 242 SMART efh_1 137 165 IPR002048 GO:0005509
Mibi09g1685 242 SMART efh_1 177 205 IPR002048 GO:0005509
Mibi09g1685 242 SMART efh_1 99 127 IPR002048 GO:0005509
Mibi09g1685 242 SMART efh_1 213 241 IPR002048 GO:0005509
Mibi09g1685 242 MobiDBLite consensus disorder prediction 67 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1685 Mibi-ChrMibi09 35187506 35189363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1685 83 238 EF-hand Containing Proteins AT5G49480 56.962 2.24e-53 168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1685 09 35187506 35189363 Mibi09g1685 09 35187506 35189363 ECH