Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1676 ATGGCAACTGGACAACTGTTCTCCCGCACTACACAAGCATTATTTTACAACTACAAGCAACTTCCTATCCAGCGGATGCTTGATTTTGACTTCCTCTGTGGTAGGGAGACACCATCAGTTGCTGGAATCATTAATCCTGGTTCCGAGGGATTTCAGAAGCTCTTTTTTGGTCAAGATGAAATTGCAATCCCAGTGCATTCTACCATTGAAGCAGCTTGTGCTGCACATCCTACAGCTGATGTCTTCATCAATTTTGCATCATTTAGGAGTGCTGCTGCTTCATCCTTGACTGCGTTGAAGCAACCAACAATTAGAGTTGTTGCTATTATCGCAGAAGGTGTGCCTGAGTCTGATACCAAGAATTTGATTGCATATGCCCGGTCAAACAATAAGGTTGTTATCGGCCCAGCCACTGTTGGAGGTATTCAAGCTGGTGCTTTTAAGATAGGTGACACAGCTGGAACAATTGACAATATTATTCAATGCAAGCTGTACAGGCCTGGATCGGTTGGCTTTGTTTCTAAATCTGGCGGGATGTCCAATGAATTGTATAACACTATTGCTCGGGTAACAGATGGAGTTTATGAAGGCATTGCGATTGGAGGGGATGTTTTTCCTGGTTCTACACTTTCTGATCATATTTTGCGGTATAACCACATGCCCCAGGTTAAAATGATGGTAGTGCTTGGGGAATTGGGTGGACGAGATGAGTATTCTCTTGTGGAAGCCCTAAAGCATGGGAAAGTGACAAAACCAGTTGTTGCCTGGGTCAGTGGAACCTGTGCTCGACTCTTCAAGTCTGAAGTACAATTTGGTCATGCTGGAGCTAAAAGTGGTGGTGAAATGGAGTCTGCTCAAGCGAAGAACCAAGCACTTAGAGAAGCTGGAGCTGTTGTCCCCACGTCATATGAAGCTTTTGAAGCTGCAATTAAGGAAACATATGACAGATTGGTAGAAGAAGGGAAAATCACGCCAGTGAAGGAGTTCACTCCTCCAGAGATTCCTGAGGACCTTAATTCTGCAATTAGGAATGGAAAAGTCCGTGCGCCAACTCATATTATTTCCACCATCTCTGATGATAGAGGTGAGGAGCCGTGCTATGCTGGTGTTCCCATGTCTAACATTATTGAAAAAGGTCTGGGTGTAGGTGATGTTATATCTCTCCTGTGGTTCAAACGCAGCCTACCTCGTTACTGCACAAAATTTATTGAGATATGTATCATGCTATGTGCCGACCATGGTCCTTGTGTCTCTGGTGCTCACAATTCTATAGTGACAGCGAGGGCAGGGAAGGACCTTGTCTCCAGCCTGGTATCAGGATTGCTTACAATTGGTCCTCGATTTGGTGGTGCCATTGATGATGCTGCTCGTTACTTCAAGGATGCTTATGACAGGAATCTGACACCTTACGAATATGTTGAAGGCATGAAGAAGAAGGGCATCCGTGTGCCAGGAATAGGCCACAGGATCAAGAGCAGAGACAACAAAGATAAGAGAGTAGAGTTGCTACAGAAGTTTGCAAATACCCATTTTCCTTCTGTAAAATACATGGAATATGCCGTTCAGGTTGAAAACTACACCCTTACAAAGGCAAATAACCTGGTTCTCAACGTAGATGGTGCAATTGGGTCCCTTTTCTTGGATCTTCTTGCTGGCAGTGGGATGTTCACCAAGCAAGAGATCGATGAAATTGTCGAAATTGGCTATCTGAATGGGCTATTTGTGCTGGCTCGCTCCATTGGCTTCATTGGGCATACCTTTGACCAGAAGAGATTGAAACAACCACTATATCGCCACCCATGGGAGGATGTTCTCTACGCGAAGTGA 1827 0.4477 MATGQLFSRTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQDEIAIPVHSTIEAACAAHPTADVFINFASFRSAAASSLTALKQPTIRVVAIIAEGVPESDTKNLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGVYEGIAIGGDVFPGSTLSDHILRYNHMPQVKMMVVLGELGGRDEYSLVEALKHGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALREAGAVVPTSYEAFEAAIKETYDRLVEEGKITPVKEFTPPEIPEDLNSAIRNGKVRAPTHIISTISDDRGEEPCYAGVPMSNIIEKGLGVGDVISLLWFKRSLPRYCTKFIEICIMLCADHGPCVSGAHNSIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRNLTPYEYVEGMKKKGIRVPGIGHRIKSRDNKDKRVELLQKFANTHFPSVKYMEYAVQVENYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEIDEIVEIGYLNGLFVLARSIGFIGHTFDQKRLKQPLYRHPWEDVLYAK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1676 608 SUPERFAMILY Citrate synthase 134 605 IPR036969 GO:0046912
Mibi09g1676 608 Gene3D Citrate Synthase, domain 1 399 598 IPR016142 -
Mibi09g1676 608 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family active site. 259 275 IPR017440 -
Mibi09g1676 608 PANTHER ATP-CITRATE SYNTHASE 5 607 - -
Mibi09g1676 608 Pfam CoA-ligase 173 298 IPR005811 GO:0003824
Mibi09g1676 608 Gene3D - 2 137 - -
Mibi09g1676 608 FunFam ATP-citrate synthase subunit 138 323 - -
Mibi09g1676 608 CDD CCL_ACL-C 369 606 - -
Mibi09g1676 608 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 3. 168 193 IPR017866 -
Mibi09g1676 608 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 136 IPR036291 -
Mibi09g1676 608 Gene3D - 451 552 IPR016143 -
Mibi09g1676 608 Pfam Citrate synthase, C-terminal domain 398 598 IPR002020 GO:0006099|GO:0046912
Mibi09g1676 608 Gene3D - 138 323 IPR016102 -
Mibi09g1676 608 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 1. 174 203 IPR033847 -
Mibi09g1676 608 FunFam ATP-citrate synthase beta chain protein 2 137 - -
Mibi09g1676 608 FunFam ATP-citrate synthase subunit 1 455 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1676 Mibi-ChrMibi09 35050399 35055367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1676 1 608 Acyl Lipid Metabolism Gene Families AT3G06650 91.447 0.0 1133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1676 09 35050399 35055367 Mibi09g1676 09 35050399 35055367 ECH