Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1635 ATGAAGATCAACGTTAACTCCGTCGCTCGCAAAGTGGAGGTTGACAATCGCATACCCCTCTATTATTATTACCGAATTGCCGATAATCTTCTCAAACAGGCTAAGATCTACCGGGAGGAGAACAATATAGTCGACTTGTATATCATTCTTCTCAGATTTTCAAGTTTGGTTTCTGAAACTATACCATTTCATCGAGATTACCAAGCTTCACTTCCCAAGGAAAGAGCAGCATATAAGAAGAGATTGCTAGCTGTATTGGATGAGCTTGAATCTTTGAAGCCAGAATTCAAAAAGGTTAATGAATTGAATGAGTTACAAGGGTATGCTCAATTTCCTAAAGCTAATGACTCCAACAAGGCTCTGCACAGTTCAACACCTTCATCTTTGGAATGGCCTGCGGTCAATAATAATTCTTACTCAAGAACGGATTCTAAGCAGCTGCTGCCTTCTGGGTTGGGTCTGCAGTCTTCATGGAAATTTAATAATAATACTGGTCATTACGTATCATCCAATGCTGTGCCTATTGACAAGCAATATCAGAAACTATCTCTTAGTTTACCTCTTCCAAAAGAGGAGACTCTATCCAGACACTCATTTTTGGGACCAAATGGTCTTCGGGGCCAGTGGCTGGGACCAAGTGCAGGAATGAAGGTTCAGTATCCAAGCAGTAGTGATTTGACTATTGCTCAGAATTCAAGTCTGGATCAGGATGGAAAATATGATCTTGTGGCAGTTAAAGAGGGTGATCCAGGAACCGACACGTCCACAATGGATTCAGTGCTCTCCTTGGATGATGGAAGTTGGTCTCGTCCTGTTGATGAGTCATGTCCTCCCCTATTGAATGAATCAGTGGACAGTCACTTCCAGTCGCTCAACATTAGGCAACCTTCACCACCTCCAGTTCTTGCTCAGGTTCAGCCAGAATATGCCTCAATTCCTCCTTCAAAAGTAGCAGATCCAAGACCAGGACCGGCCAAGTCTTCTCCAGATTCTCCACTTGGTCCTGCTGCATATCAGCACCTTCATATTCCTGTCAAAATGATGGATGATTTTTTAAGATTGGCTCTGGAAAATACACGGAAAAACCTAGAGACTTGTGGTGTTCTTGCTGGGTCCTTGAAAAACAGGGTTTTCCATATCACTACACTCATAATTCCAAAGCAGGAATCAACTCCTGATACGTGCCAAACATTGAATGAGGAAGAGATATTTGAAGTTCAAGACCGTTTATCACTTTTTCCCTTAGGCTGGATACATACACACCCATCACAGACTTGTTTCATGTCATCAGTAGATCTCCACACGCATTACTCATACCAGATCATGTTACCAGAGGCAATTGCAATTGTCATGGCCCCTACGGATACAAAAAGTCCACATGGCATATTTCATCTGTCTGATCCTGGTGGCGTGTCAGTAATTCGCAACTGTCAGCAACGGGGATTTCATCCCCATGAGGAGCCTTCTGATGGAAGCCCAATTTATGAGCATTGCTCTCATGTCTTTATGAACGCTAACCTGAAGTTTGATGTTGTTGACCTTCGATAG 1548 0.4289 MKINVNSVARKVEVDNRIPLYYYYRIADNLLKQAKIYREENNIVDLYIILLRFSSLVSETIPFHRDYQASLPKERAAYKKRLLAVLDELESLKPEFKKVNELNELQGYAQFPKANDSNKALHSSTPSSLEWPAVNNNSYSRTDSKQLLPSGLGLQSSWKFNNNTGHYVSSNAVPIDKQYQKLSLSLPLPKEETLSRHSFLGPNGLRGQWLGPSAGMKVQYPSSSDLTIAQNSSLDQDGKYDLVAVKEGDPGTDTSTMDSVLSLDDGSWSRPVDESCPPLLNESVDSHFQSLNIRQPSPPPVLAQVQPEYASIPPSKVADPRPGPAKSSPDSPLGPAAYQHLHIPVKMMDDFLRLALENTRKNLETCGVLAGSLKNRVFHITTLIIPKQESTPDTCQTLNEEEIFEVQDRLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTKSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPSDGSPIYEHCSHVFMNANLKFDVVDLR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1635 515 SUPERFAMILY JAB1/MPN domain 340 471 - -
Mibi09g1635 515 FunFam AMSH-like ubiquitin thioesterase 3 326 515 - -
Mibi09g1635 515 MobiDBLite consensus disorder prediction 312 337 - -
Mibi09g1635 515 PANTHER AMSH-LIKE PROTEASE 3 515 - -
Mibi09g1635 515 ProSiteProfiles MPN domain profile. 341 471 IPR037518 -
Mibi09g1635 515 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 337 444 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi09g1635 515 Pfam USP8 dimerisation domain 7 96 IPR015063 -
Mibi09g1635 515 SMART pad1_6 340 468 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi09g1635 515 MobiDBLite consensus disorder prediction 246 274 - -
Mibi09g1635 515 FunFam AMSH-like ubiquitin thioesterase 3 1 116 - -
Mibi09g1635 515 Gene3D Cytidine Deaminase, domain 2 329 515 - -
Mibi09g1635 515 Gene3D - 3 123 - -
Mibi09g1635 515 CDD MPN_AMSH_like 338 515 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1635 Mibi-ChrMibi09 34666710 34674081 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1635 09 34666710 34674081 Mibi09g1635 09 34666710 34674081 ECH