Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1354 ATGGCTGTTTCCATGAGGGACTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTAGAAATATGGCGTATTGAGAATTTTAATCCTGTTCCCATCCCAAAGTCCTCCTATGGGAAGTTTTTCACTGGGGACTCCTATGTAATCTTGAAGACAACTGCTTCAAAGAGTGGTGCTTTGCGTCATGATATTCATTACTGGCTTGGAAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCGTCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGTCGTGCTGTTCAATACCGTGAAGTGCAGGGTCATGAAACTGAAAAGTTCCTGTCTTACTTCAAACCCTGTATTATACCTCAGGAAGGCGGAGTTGCATCTGGTTTTAAGCATGTAGAGGATGAAGAATATAAGATTCGAATGTTTGTCTGCAAAGGAAAACATGTTGTGCATGTCAAAGAAGTTCCTTTTGCCCGATCTTCACTAAACCATGATGATATATTTATTCTGGATACGAAATCCAAAATCTTCCAATTTAATGGTTCAAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTGCAATATATTAAAGATACACACCATGATGGGAAATGTGAGGTAGCTGCTATTGAGGATGGAAAGCTGATGGCTGATTCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGTTTCGCCCCTCTTCCGCGAAAACCAGCCAGTGATGATGATCAGCATGTTGATACTCATACTCCAAAGCTGATTTGCGTTGAAAAGGGGCTAGCTGAACCCGTTACAAATGATTCTCTGACAAGGGAGTTACTGGACACGAATAAATGCTATATTCTTGATTGTGGGCTAGAAGTGTTCGTCTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGTGGCTGATGAGTTAGTCAGTGGCTCTGATAGACAGAAATCCCAGATAATTCGTGTAATTGAAGGATTTGAAACAGTGATGTTCAAGTCCAAGTTTGATTCATGGCCTCAGACGACTGAAGTAACTGTGTCTGAAGATGGTCGTGGAAAGGTGGCAGCACTTCTGAAACGGCAAGGAGTGAATGTCAGGGGTCTGCTGAAAGCTGATCCAGTAAAAGAAGATCCTCAACCCTATATTGATTGCACAGGAAATTTGCAGGTTTGGCGTGTAAACGGTCAAGAAAAAATTCTCCTTCCTGCTTCTGATCAGTCAAAGCTTTATAGCGGCGATTGCTACATCTTTCAGTATACTTATCCTGGAGAGGATAAGGAAGAGTATCTTATTGGAACATGGATTGGAAAGACTAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCACTTGCAAGCAAAATGGTTGAGTCATTGAAGTTTCTTCCTTCCCAGACTCGTATTTATGAAGGGAATGAGCCAATTCAATTTTATACTATCTTCCAAAGCTTGATTGTTTTTAAGGGCGGAGTTAGTGAAGGATACAAAAATTACATTGCGGAAAATGAAATTCCTGATGATACGTACAATGAGGATGGTGTTGCACTATTTCGCATCCAGGGTTCAGGCCCGGACAATATGCAAGCAATACAAGTTGAACCAGTTGCTTCCTCCTTGAATTCCTCTTATTGCTACATACTTCATAATGGGTCCACTGTCTTTACATGGAATGGAAACCTTACAACCTCAGATGTTCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAACTTACAGACAAAGCTGCAAAAGGAAGGGTCAGAATCTGAACAGTTTTGGGATTTATTGGGAGGAAAATCTGAATATCCTAGCCAGAAGATTGCAAGGTGTGCTGAAAGTGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGGAAATTTAAAGGTGTCAGAGATATTCAATTTTTCCCAGGATGATCTGATGACTGAAGATATTTTCATCTTATATTGTCACTCTGAAATCTTTGTCTGGGTTGGGCAGCAGGTTGACCCCAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCACGATTTTCTTTTAGAAAAGGTGTCTCATGATACTCCGATATACATTGTTATGGAAGGGAGTGAGCCTCCTTTCTTCACTCGTTTCTTCGCTTGGGAGTCTGCAAAATCTGTGATGCTGGGAGATTCATTTCAGAGGAAACTCACAATAGTAAAAAATGGGGGAACTCCAACTGTGGATAAACCCAAACGGAGAACACCGGCATCCTATGGGGGAAGATCTAGCAGTGTACCAGATAAATCCCAGCGCTCCCGGAGCATGTCCTTTAGTCCAGATCGTGTTCGTGTGCGAGGAAGGTCCCCAGCCTTCAATGCCTTAGCAGCTGCATTTGAGAATCCTGGTGCCAGGAACCTTTCAACTCCACCTCCAGTGGGTAGGAAACTGTATCCCAAATCTGTGACCCCTGATTCAGCGAAATCGGCACCCAAATCCGCAGCCATAGCAGCACTCAGTTCTAGCTTTGAGCAACCACCTTCTGCTCGAGATAGTCTGATACCTCGGTCAATCAAAGTGAATCAGAGTCCAGAGGCTCCCAAGCCTAAGCCTGAGACAAACAACAACAACAACAACAAGGAGAATTTCATGACCACCAGAATAGAATCTCAAACCATAACGGAAGATGTTAAAGAGGATGAACCTGAAGATGAGGAAGGTCTTTCAATTTACCCATATGAACGCCTCAAAACATCATCTACGAATCCCGTAACAGACATTGATGTCACTAAGCGAGAGACTTATCTGTCATCTGCGGAGTTCAAAGAGAAATTTGGGATGACAAAGGATGCCTTTTACAAGTTGCCAAAATGGAAACAGAACAAATTCAAGATGGCCGTTGCAGAGAGGAATTGA 2907 0.4276 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVPIPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVEDEEYKIRMFVCKGKHVVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTHHDGKCEVAAIEDGKLMADSETGEFWGFFGGFAPLPRKPASDDDQHVDTHTPKLICVEKGLAEPVTNDSLTRELLDTNKCYILDCGLEVFVWMGRNTSLDERKSASGVADELVSGSDRQKSQIIRVIEGFETVMFKSKFDSWPQTTEVTVSEDGRGKVAALLKRQGVNVRGLLKADPVKEDPQPYIDCTGNLQVWRVNGQEKILLPASDQSKLYSGDCYIFQYTYPGEDKEEYLIGTWIGKTSVEEERASAISLASKMVESLKFLPSQTRIYEGNEPIQFYTIFQSLIVFKGGVSEGYKNYIAENEIPDDTYNEDGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGSTVFTWNGNLTTSDVQELVERMLDLIKPNLQTKLQKEGSESEQFWDLLGGKSEYPSQKIARCAESDPHLFSCNFSKGNLKVSEIFNFSQDDLMTEDIFILYCHSEIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLEKVSHDTPIYIVMEGSEPPFFTRFFAWESAKSVMLGDSFQRKLTIVKNGGTPTVDKPKRRTPASYGGRSSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAAAFENPGARNLSTPPPVGRKLYPKSVTPDSAKSAPKSAAIAALSSSFEQPPSARDSLIPRSIKVNQSPEAPKPKPETNNNNNNKENFMTTRIESQTITEDVKEDEPEDEEGLSIYPYERLKTSSTNPVTDIDVTKRETYLSSAEFKEKFGMTKDAFYKLPKWKQNKFKMAVAERN 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1354 968 FunFam Villin-4 248 354 - -
Mibi09g1354 968 FunFam Gelsolin 6 131 - -
Mibi09g1354 968 FunFam Villin-4 385 519 - -
Mibi09g1354 968 Gene3D Severin 522 612 IPR029006 -
Mibi09g1354 968 MobiDBLite consensus disorder prediction 739 782 - -
Mibi09g1354 968 CDD gelsolin_S5_like 517 608 - -
Mibi09g1354 968 CDD gelsolin_S2_like 140 217 - -
Mibi09g1354 968 FunFam Gelsolin 520 612 - -
Mibi09g1354 968 CDD gelsolin_S6_like 621 719 - -
Mibi09g1354 968 MobiDBLite consensus disorder prediction 864 881 - -
Mibi09g1354 968 SUPERFAMILY Actin depolymerizing proteins 129 243 - -
Mibi09g1354 968 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Mibi09g1354 968 SMART VHP_1 932 964 IPR003128 GO:0003779|GO:0007010
Mibi09g1354 968 FunFam Villin-like 1 132 247 - -
Mibi09g1354 968 Gene3D Severin 247 357 IPR029006 -
Mibi09g1354 968 SUPERFAMILY VHP, Villin headpiece domain 891 964 IPR036886 GO:0003779|GO:0007010
Mibi09g1354 968 MobiDBLite consensus disorder prediction 857 881 - -
Mibi09g1354 968 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 249 427 IPR036180 -
Mibi09g1354 968 CDD gelsolin_S3_like 253 343 - -
Mibi09g1354 968 FunFam Villin-like 1 905 965 - -
Mibi09g1354 968 SMART VILL_6 19 117 IPR007122 GO:0051015
Mibi09g1354 968 SMART VILL_6 252 344 IPR007122 GO:0051015
Mibi09g1354 968 SMART VILL_6 137 234 IPR007122 GO:0051015
Mibi09g1354 968 SMART VILL_6 622 719 IPR007122 GO:0051015
Mibi09g1354 968 SMART VILL_6 392 489 IPR007122 GO:0051015
Mibi09g1354 968 SMART VILL_6 519 606 IPR007122 GO:0051015
Mibi09g1354 968 SUPERFAMILY Actin depolymerizing proteins 595 716 - -
Mibi09g1354 968 CDD gelsolin_S1_like 12 124 - -
Mibi09g1354 968 MobiDBLite consensus disorder prediction 755 775 - -
Mibi09g1354 968 CDD gelsolin_S4_like 386 486 - -
Mibi09g1354 968 Gene3D Severin 7 132 IPR029006 -
Mibi09g1354 968 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Mibi09g1354 968 FunFam Villin-like 1 613 734 - -
Mibi09g1354 968 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Mibi09g1354 968 Gene3D Severin 613 732 IPR029006 -
Mibi09g1354 968 Gene3D Villin headpiece domain 905 965 IPR036886 GO:0003779|GO:0007010
Mibi09g1354 968 Gene3D Severin 133 246 IPR029006 -
Mibi09g1354 968 MobiDBLite consensus disorder prediction 799 826 - -
Mibi09g1354 968 PANTHER VILLIN 7 957 IPR007122 GO:0051015
Mibi09g1354 968 Gene3D Severin 385 521 IPR029006 -
Mibi09g1354 968 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Mibi09g1354 968 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Mibi09g1354 968 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Mibi09g1354 968 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Mibi09g1354 968 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Mibi09g1354 968 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Mibi09g1354 968 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Mibi09g1354 968 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Mibi09g1354 968 Pfam Villin headpiece domain 932 964 IPR003128 GO:0003779|GO:0007010
Mibi09g1354 968 ProSiteProfiles Headpiece (HP) domain profile. 902 967 IPR003128 GO:0003779|GO:0007010
Mibi09g1354 968 Pfam Gelsolin repeat 150 216 IPR007123 -
Mibi09g1354 968 Pfam Gelsolin repeat 269 337 IPR007123 -
Mibi09g1354 968 Pfam Gelsolin repeat 28 111 IPR007123 -
Mibi09g1354 968 Pfam Gelsolin repeat 410 482 IPR007123 -
Mibi09g1354 968 Pfam Gelsolin repeat 639 712 IPR007123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1354 Mibi-ChrMibi09 30421850 30430805 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1354 09 30421850 30430805 Mibi13g0969 13 12354455 12355574 CCT
Mibi13g1169 13 15487901 15488203 Mibi09g1354 09 30421850 30430805 CCT
Mibi09g1354 09 30421850 30430805 Mibi09g1354 09 30421850 30430805 ECH