Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0812 ATGTGCGTGTCTGATCTATATTATTCATCTTTTCAAAGGAATGCCTATAACTCAATTATTGTCGGCATGCCAATGGAGTGGCTAGAAATCTTCTTGGTAGCAACATGCTCCTTAGGATTCATCACTCTTTCAAAAGCTTTAGTCAATTTTATCAGATGGGTGTGGGTTATGTTTTTGAGGTCATCCAAGAATCTCAAAACCTATGGCTCATGGGCTATTGTCACCGGTTCAACCGATGGAATCGGAAAAGCGATTTCCTTGGAATTGGCTTCCAAAGGACTCAACATCCTTCTAGTTAGTCGGAATCCTATAAAGCTTGAAGCCACATCGAAGGAGATAAGAGATAAACATGGTGAACAAGTTGAGGTGAAGCTTGTGGTGATAGACTTTGAGAGAGTAAATGGAGTAGAAATAGTGAAGAAGATAGAGGAAGAAACGCAAGGTTTAGATGTGGGTGTGTTGGTGAATAACGTTGGCATGGCAAGCCCTTTTCCAAGGTACTTTCATGAAGATGATTTGGAGTTCATGGAAGCAATTATTAAAGTGAATTTGGAAGCAATATCTTGGGTAACGAAGGTTGTGATTGAAGGAATGATCAGAAGGAAAAAAGGAGTTATCGTCAATATTGGTTCTGGTTCTTGCTCTATGATTCCCTCTTATCCTTTGTGCTCTCTCTATGCTGGTACAAAAGCGTATTTGTGGATGTTCTCAAAATGCATCGGTTTAGAATACAAATCACAAGGGATTGACGTCCAGTGCCAGGTACCGATGTTTGTGGCAACGAAGATGGTAAAAATGAAGACATCCTTATTTGTTCCTACTGCTAAGGATTACTGCAAAGATAGCATCAGATGGTTTGGTTATTATGAGAGTATATGTGTCCCCTATCTTTTCCATTCTCTTCAAAGTCTTCTTATAGAAATGGTTCCTCATTCACTCGTTAATTGGTATCTCATGCGACTACATCTTGACCTGCGCAAAAGAGGACTTGCCAAGTATTCCAAACTCAAGGCTAGTTAA 1020 0.398 MCVSDLYYSSFQRNAYNSIIVGMPMEWLEIFLVATCSLGFITLSKALVNFIRWVWVMFLRSSKNLKTYGSWAIVTGSTDGIGKAISLELASKGLNILLVSRNPIKLEATSKEIRDKHGEQVEVKLVVIDFERVNGVEIVKKIEEETQGLDVGVLVNNVGMASPFPRYFHEDDLEFMEAIIKVNLEAISWVTKVVIEGMIRRKKGVIVNIGSGSCSMIPSYPLCSLYAGTKAYLWMFSKCIGLEYKSQGIDVQCQVPMFVATKMVKMKTSLFVPTAKDYCKDSIRWFGYYESICVPYLFHSLQSLLIEMVPHSLVNWYLMRLHLDLRKRGLAKYSKLKAS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0812 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 66 320 IPR036291 -
Mibi09g0812 339 FunFam Hydroxysteroid (17-beta) dehydrogenase 3 65 293 - -
Mibi09g0812 339 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 213 241 IPR020904 GO:0016491
Mibi09g0812 339 Gene3D - 64 283 - -
Mibi09g0812 339 PRINTS Glucose/ribitol dehydrogenase family signature 198 214 IPR002347 -
Mibi09g0812 339 PRINTS Glucose/ribitol dehydrogenase family signature 247 264 IPR002347 -
Mibi09g0812 339 PRINTS Glucose/ribitol dehydrogenase family signature 71 88 IPR002347 -
Mibi09g0812 339 PRINTS Glucose/ribitol dehydrogenase family signature 226 245 IPR002347 -
Mibi09g0812 339 PRINTS Glucose/ribitol dehydrogenase family signature 149 160 IPR002347 -
Mibi09g0812 339 CDD 17beta-HSD1_like_SDR_c 69 310 - -
Mibi09g0812 339 PIRSF 11-beta-HSD1 23 332 - -
Mibi09g0812 339 PANTHER RH59310P 28 334 - -
Mibi09g0812 339 Pfam short chain dehydrogenase 71 266 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0812 Mibi-ChrMibi09 11525617 11528400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0812 27 334 Lipid Metabolism Gene Families AT1G67730 47.249 1.77e-99 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0812 09 11525617 11528400 Mibi09g0812 09 11525617 11528400 ECH