Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0767 ATGGGCGGTCGAGGCAAGTCTCGCACTCAACGAAAGCATTTCCGACAGAACAGAGAAAATGTGTGGAAGCGTTCTAAACCTGATCCTTCTTCTCAAGATCCTGACTCTACCGATAATCCAAATCCTACTTGGACTCCCTTCGCCACTCAGAACTCTGCTTTTGATGACTACTATAAAGAGCAGGGCATAGTGCCACCAGAAGATTGGGATGCTTTTGTTGCAGTTCTCAGAACTCCTTTGCCTGCTAGCTTCAGAATTAATGCTTGTAGCCAGTTTTCTGCCGATCTTAGGTCACAATTGGAGAATGATTTTGTGCAAACTCTTCGAGCTGAGGTTGTTGAAGGGGAAGATGATGAGGCCATTAAACCTTTGCCATGGTATCCTGATAATCTTGCTTGGCATTCCAATTTCTCCCGTATGCAGCTGAGGAAGAATCAAACGCTTGAGAGGTTCCATGAATTCCTAAAGCTCGAAAATGAAATCGGAAATATTACAAGACAGGAAGCTGTCAGCATGGTGCCTCCACTATTCTTGAATGTGCAGCCAAATCACTTTGTGCTTGATATGTGTGCGGCACCAGGTTCGAAAACATTCCAGTTGCTTGAGATTATATACCAATCAACTAAAGCTGGATCTCTTCCTGATGGAATGGTGATAGCAAATGATCTTGATGTTCAAAGATGCAATCTTCTCATCCACCAAACAAAAAGGATGTGCACAGCCAACCTCATCGTCACTAATCATGAAGCTCAGAACTTCCCAGGCTGTCGCTTAGTCAGAAATCATGAATCATTGGAACCAGAACAGCATATTAGCCAACTTTTATTTGATTGCATTCTCTGTGATGTCCCTTGCAGTGGAGATGGAACCCTTCGCAAGGCACCTGATCTTTGGAGGAAATGGAATACTGGGATGGGCAATGGGCTTCATAGCCTACAAGTTCTAATAGCCATGCGAGGCTTATCTTTACTTAAAGTTGGTGGAAGAATGGTCTATTCAACCTGCTCAATGAATCCAATTGAGAACGAAGCTGTGGTTGCAGAGGTTTTACGAAGGTGTGAAGGATCTGTTCAACTTGTTGATGTCTCTAATGAGCGACCCCAACTTTTGCGCCGGCCAGGTCTCAAGAGATGGAAGGTACGTGACAGGGGCTTGTGGCTGTCTTCCTATAAAGATGTTCCCATGTATCGAAGAGGTGCAGTTTTTCCCAGCATGTTTCCTTCTGGAAAAAACTATCGGGATATGGTTGACAGTAATGACAAGATGGAGATGGGAGATGATAATGATAAGGGTATGTGTGGAAACTCTGAAGATGGCAATCAAACAGCTCAAAATCCTGTCACAGATAAGTTAACTGAGGAAGTTTCTGATTTACCTCTAGAGTGCTGCATGAGGATAGTGCCTCATGATCAAAACACTGGAGCTTTCTTTATTGCAGTACTGCAAAAGGTTTCTCCTCTTCCAGCAATTCCTATTCCAGAAAAAACAAAAAATGGAATTGATAAGCAGCATGGAGAACCAGAGAATCTGGATATTGAGGATTCAAAGGTATCGCAGGTCGATCCATTAGAAAGTACACATGAGGAAGCTTTGGAAAAGGTTGATGTAAGTGATAACAAACCCAACACAGAAGATTTGGAAGCCAGTCCTTCTGGTGCATGTTTAGAAGGGGATGCAGAGGAAGTGCAAAAGCCTCCAAAAACAGAAGGCATAGTAAAAACGACTCCAGGGAAAAGAAAGCTGCAGATTCAAGGCAAGTGGAGAGGCGTTGATCCTGTTTTCTTTTTCAAAGATGAAGACACTGTTAACAGCATTAAGGATTTTTATGGTATCGATGAAAGGTTTCCATTCAATGGTCATCTTGTCACTAGAAACAACGATGGAGGCCATGTGAAAAGAATTTACTATGTCAGTAAGTCAGTCAAAGATGTTCTTGAACTGAACTTCTCAGTTGGGCAGCAACTCAAATTAGCTTCCCTTGGTTTGAAGATGTTTGAAAGACAGACAACAAGAGAAGGAATCTCAGCCCCATGTGCTTTCCGAATATCATCTGAAGGATTGCCTCTTATCTTGCCATACATTACCAAGAGGATTCTTTGTGCATCTCCTGGAGACTTCAAGCATCTTCTGCAGTACAAAACAATAAAATTTGCAGACTTTGTTGATGCCGAGTTCGGCAAAAAGGCTGAAAACCTAACGCCAGGCTATTGTGTGGTCGTTCCAAGTAAAGGGAAAAGAGAGGCTTCAGAATTCATTGAGGTGGACGAGTCTAGCATAGCCATTGGATGTTGGAAAGGAAGGGCTAGTATGAATGTGATGGTAACTGCAATGGACTGCCGAGAACTGCTCGAAAGACTTTTAGTTCGCTTCGACACAGAAAATGGTTCCTCCGTTGTGCATGAGAACACAGCCTCCAAAAATTCCGTTGATGACACAGAAAATGGTTCCTCTGTGGTGCATGAGAACATGCCCTCCAATAATGCCGTTGATGAGGTACAAGGCCCCAACGATATAGATGATAACTCAGAAGCTCCCGGAGGCAACAACAGTTAA 2553 0.432 MGGRGKSRTQRKHFRQNRENVWKRSKPDPSSQDPDSTDNPNPTWTPFATQNSAFDDYYKEQGIVPPEDWDAFVAVLRTPLPASFRINACSQFSADLRSQLENDFVQTLRAEVVEGEDDEAIKPLPWYPDNLAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLNVQPNHFVLDMCAAPGSKTFQLLEIIYQSTKAGSLPDGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQNFPGCRLVRNHESLEPEQHISQLLFDCILCDVPCSGDGTLRKAPDLWRKWNTGMGNGLHSLQVLIAMRGLSLLKVGGRMVYSTCSMNPIENEAVVAEVLRRCEGSVQLVDVSNERPQLLRRPGLKRWKVRDRGLWLSSYKDVPMYRRGAVFPSMFPSGKNYRDMVDSNDKMEMGDDNDKGMCGNSEDGNQTAQNPVTDKLTEEVSDLPLECCMRIVPHDQNTGAFFIAVLQKVSPLPAIPIPEKTKNGIDKQHGEPENLDIEDSKVSQVDPLESTHEEALEKVDVSDNKPNTEDLEASPSGACLEGDAEEVQKPPKTEGIVKTTPGKRKLQIQGKWRGVDPVFFFKDEDTVNSIKDFYGIDERFPFNGHLVTRNNDGGHVKRIYYVSKSVKDVLELNFSVGQQLKLASLGLKMFERQTTREGISAPCAFRISSEGLPLILPYITKRILCASPGDFKHLLQYKTIKFADFVDAEFGKKAENLTPGYCVVVPSKGKREASEFIEVDESSIAIGCWKGRASMNVMVTAMDCRELLERLLVRFDTENGSSVVHENTASKNSVDDTENGSSVVHENMPSNNAVDEVQGPNDIDDNSEAPGGNNS 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0767 850 MobiDBLite consensus disorder prediction 798 850 - -
Mibi09g0767 850 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 49 391 - -
Mibi09g0767 850 Pfam 16S rRNA methyltransferase RsmB/F 177 363 IPR001678 GO:0008168
Mibi09g0767 850 MobiDBLite consensus disorder prediction 434 448 - -
Mibi09g0767 850 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 133 154 IPR023270 GO:0016428
Mibi09g0767 850 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 361 380 IPR023270 GO:0016428
Mibi09g0767 850 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 655 667 IPR023270 GO:0016428
Mibi09g0767 850 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 10 796 IPR023267 GO:0001510
Mibi09g0767 850 MobiDBLite consensus disorder prediction 414 433 - -
Mibi09g0767 850 MobiDBLite consensus disorder prediction 798 832 - -
Mibi09g0767 850 PRINTS RNA (C5-cytosine) methyltransferase signature 187 197 IPR023267 GO:0001510
Mibi09g0767 850 PRINTS RNA (C5-cytosine) methyltransferase signature 277 289 IPR023267 GO:0001510
Mibi09g0767 850 PRINTS RNA (C5-cytosine) methyltransferase signature 466 483 IPR023267 GO:0001510
Mibi09g0767 850 PRINTS RNA (C5-cytosine) methyltransferase signature 327 343 IPR023267 GO:0001510
Mibi09g0767 850 MobiDBLite consensus disorder prediction 32 48 - -
Mibi09g0767 850 MobiDBLite consensus disorder prediction 529 552 - -
Mibi09g0767 850 MobiDBLite consensus disorder prediction 14 31 - -
Mibi09g0767 850 MobiDBLite consensus disorder prediction 497 516 - -
Mibi09g0767 850 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 53 484 IPR029063 -
Mibi09g0767 850 Gene3D Vaccinia Virus protein VP39 48 402 IPR029063 -
Mibi09g0767 850 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 72 484 IPR001678 GO:0008168
Mibi09g0767 850 MobiDBLite consensus disorder prediction 412 448 - -
Mibi09g0767 850 MobiDBLite consensus disorder prediction 494 516 - -
Mibi09g0767 850 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0767 Mibi-ChrMibi09 10179219 10186333 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0767 09 10179219 10186333 Mibi09g0767 09 10179219 10186333 CCT
Mibi09g0767 09 10179219 10186333 Mibi09g0767 09 10179219 10186333 ECH