Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0717 ATGGCCTCTCAGTGGCTGTTGGTTTGGGTAATGGCGTCATTTCTCCATGGCAATGCAATGCCGATCACGTTTTCCGCCAGGCTGATTCATCGTTTCTCTCAAGAAATGAAGGCGTTTCAGGTTTCCGGCGGCGGCGGCGGCGGCTGGCCTGAGAAAAAGAGTATGGAATACTACGATATGCTTGTAAGCGGTGATTTCCTCAGGCATAAGATGAAGCTTCGAGCACCACATCAATTGCTTTTCCCTTCTCATGGTAGTAAAACGATGTCGCTTGGAAACGACTTTGGTTGGTTACATTACACATGGATTGATATAGGGACTCCAAGTACTTCATTCCTCGTAGCACTGGATGCTGGGAGTGATCTATTTTGGGTTCCGTGTGATTGCATACAGTGTGCTCCTCTATCTGCTAGTCACTATGCTAATCTGGATAGAGATCTGAATGAGTATAGTCCATCTCGATCAACGTCCAGCAAGAATCTATCTTGCAGCCATCAGTTATGTGAGATCAGTTCCAACTGTAAAAGTTCCAGCCAGCAGTGTCCTTACGCTGTAAATTACGTCTCAGAGAATACATCAAGTTCCGGATTGTTGATAGAGGACATATTGCATCTTGCGTCAAGTCGTGATGGTGAATCCAACTCTACAGTTCAGGCTCCAATCATTATAGGGTGTGGTATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCTCCAGATGGTCTTATGGGTTTGGGAACTGGGGAAATTTCAGTTCCAAGCTTGCTTGCCAAATCAGAATTAATCCATAATTCTTTCTCAATGTGCTTTGATGATGATGATTCTGGGAGAATATTCTTTGGGGACCAGGGACCAGCCACCCAACAGTCTACTCCATTCCTGCAATTGGATGGAACATATTCGACTTATGTTATTGGAGTGAAGGCATGTTGTATCAAGGATTCATGTCTTAAGATGTCAAGCTTCAAAGCACAGGTTGATAGTGGAACATCATTTACATTTCTTCCAGGCCATGTGTATGATGCAATTACTGAGGAGTTTGACCAACAAGTAAATGCTTCGAGATCTACCTTTGAAGGATCACCTTGGGACTATTGCTATGCATCTAGTTCACCTGAGTTGCCCAAGGTTCCCTCCCTCACATTTACATTCCAAGAGAATAGCAGCTTTGTGGTCCATAATCCTGTATTTGTATTTTATGACGGTCAGGGAGTTATTGGATTTTGTTTAGCCATACAGCCAACAGATGGAGATATGGGAACAATTGGACAGAACTTCATGACAGGCTACAGGCTGGTATTTGATAGGGACAGCATGAAGCTGCGCTGGTCACAGTCAAGTTGTGAGGATCTTGCCGGTAAGAGTATGCCCTTATCTCCGACGCCGCCAAAACCCTTGCCAACAAATGAGCAACAGAGAACCAATGGGCATGCGGTTGCTCCAGCAGTTGCCGGAAGAGCTCCCCACAAACCATCAACTGCTTCGTCTCGGATGATGTCATGCCGACAACAACCTTGGCACATTTGCTTGTTTCTTCTTCTTCAACTTGTAGTAGCCTCTTCAAGGCTCTGA 1572 0.4517 MASQWLLVWVMASFLHGNAMPITFSARLIHRFSQEMKAFQVSGGGGGGWPEKKSMEYYDMLVSGDFLRHKMKLRAPHQLLFPSHGSKTMSLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLFWVPCDCIQCAPLSASHYANLDRDLNEYSPSRSTSSKNLSCSHQLCEISSNCKSSSQQCPYAVNYVSENTSSSGLLIEDILHLASSRDGESNSTVQAPIIIGCGMKQSGGYLDGVAPDGLMGLGTGEISVPSLLAKSELIHNSFSMCFDDDDSGRIFFGDQGPATQQSTPFLQLDGTYSTYVIGVKACCIKDSCLKMSSFKAQVDSGTSFTFLPGHVYDAITEEFDQQVNASRSTFEGSPWDYCYASSSPELPKVPSLTFTFQENSSFVVHNPVFVFYDGQGVIGFCLAIQPTDGDMGTIGQNFMTGYRLVFDRDSMKLRWSQSSCEDLAGKSMPLSPTPPKPLPTNEQQRTNGHAVAPAVAGRAPHKPSTASSRMMSCRQQPWHICLFLLLQLVVASSRL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0717 523 Pfam Xylanase inhibitor C-terminal 321 444 IPR032799 -
Mibi09g0717 523 Pfam Xylanase inhibitor N-terminal 100 282 IPR032861 -
Mibi09g0717 523 Gene3D Acid Proteases 74 282 IPR021109 -
Mibi09g0717 523 MobiDBLite consensus disorder prediction 451 495 - -
Mibi09g0717 523 PRINTS Pepsin (A1) aspartic protease family signature 420 435 IPR001461 GO:0004190|GO:0006508
Mibi09g0717 523 PRINTS Pepsin (A1) aspartic protease family signature 105 125 IPR001461 GO:0004190|GO:0006508
Mibi09g0717 523 PRINTS Pepsin (A1) aspartic protease family signature 324 335 IPR001461 GO:0004190|GO:0006508
Mibi09g0717 523 SUPERFAMILY Acid proteases 93 450 IPR021109 -
Mibi09g0717 523 PANTHER ASPARTYL PROTEASES 39 441 IPR001461 GO:0004190|GO:0006508
Mibi09g0717 523 Gene3D Acid Proteases 285 450 IPR021109 -
Mibi09g0717 523 FunFam Aspartyl protease family protein 1 85 282 - -
Mibi09g0717 523 FunFam Aspartyl protease family protein 1 285 450 - -
Mibi09g0717 523 ProSiteProfiles Peptidase family A1 domain profile. 99 444 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0717 Mibi-ChrMibi09 9396511 9401293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0717 75 451 Miscellaneous Gene Families AT1G44130 25.935 1.16e-22 98.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0717 09 9396511 9401293 Mibi09g0717 09 9396511 9401293 ECH