Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0629 ATGGCGGGTCATGACACCGAACTGAGGGCGGCGACGGCGGCTTACCGTAATGCGAAGGCGGAGGCGAACAAGCAGGAGGAGGCTCGATGGGCGAACGTGATCGGAAACATATTGAAGAACAGAGGAGAGTACGTTGAGGCTCTCAGGTGGCTTCGAAGAGACTATGAGGTTTCTCTCAAATATTTGCCTGAGAAGCATTTACTTCCCACCTGTCAATCTCTCGGGGAAATTTATCTTCGTCTTGAGCGTTTCAGTGATGCTCTTACCTATCAGAAAAAACACTTGGAGCTTGCTAGGGATGCAAATGACCTTGTTGAGCAGCAAAGGGCCAGTACCCAGCTTGGTCGTACTTATCATGAATTATTTTCAAGATCAGAACATGATCATCTCTCAATAAGAAATGCAAAGAAGTATTTTAAGTCTGCTATGGAGCTAGCACAGATTCTTAAGGAGGACCCACCAACTAATAAGTCTTCATTTGTCAAAGAATATATTGATGCACACAACAATATTGGAATGTTGGAAATGGAACTTGATAACTTGGAAGAGGCTAAGAAAATCCTAACTAGAGGGCTAGAGATTTGCAATGAAGAAGAGGTCAGCGAAGACGATGATGCGCGTAGCAGGCTCCATCATAACCTTGGAAATGTGTACATGGAGCTGAGAATGTGGGAAAAAGCTAGAAAACATATAGAGAAGGACATTCAAATTTGTAACAGAATTGGGCATTGTCAAGGGGAAGCAAAGGGCTACATTAATCTTGGGGAAGTGCATTACAGGAATCAGAAGTATGATGAAGCACGTTCTTATTATGAGAAGGCACTTACCCTGGCGAAATCCTTGGAAGATGAGGATGCATTGGTTAGGCAAATTGATGAAAATATCAAAACTGTAGATAAAGCTGTCAAAGTAATGGACGAATTAAAGAAAGAAGAGCAGAACTTCAAAAAGCTTAAAAGATATTTGGCTGCTGCTAGAGGCTCTGCACATGAGCGTAAATATCTTCTGCAGCAAAATGCTTCCGTTGATCGCCTTCTTGAGAAATCAAGTATGATATTTGCATGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAAGAAATAGCAAGTGAATTGCGTGACAATGAAAGGCTCAGTGATTCATATCTGGCTATTGGAGAATCATACCAGAAGCTCAGAAATTTCAATGAATCTATCAAATGGTACAGAAAGAGTTGGGAAATTTACAAAACAATTGGTAACTTAGAGGGCCAAGCACTCGTGAAAATTGATATTGGTAATGTTTTGGATTCTGTTCACAATTGCAAAGGAGCACTAGATGCATTTGAAGAGAGCTACAGGATTGCTGTTGAAGCTAACCTTCCTTCTGTACAGCTTTCTGCTCTGGAAAATATGCACTATAGCAATATGATAAGATTTGATAATGAAAATGAAACCAGGAGGTTGAAACTTTTAATTGATCAGCTGAAGAAATCAATAGATAACGACCCTGAACCAAAATATATACAAGAGGATTTCTGCTCGGAGACTGATACTGAAGCAGAAGGTTATCTCTCAAATAGTGGGTCTGAATCAAAAATGGCTACTTCTCGAGAAGATTGGAACGATGACATGCCCCTGATGTCAGTCTTTAAGTCCAGAAAACAATCCTCACAAAGCGCAGGTTTCATTGGAGGTTTTAGCAACTCTTTAGAGGAACCTCAGCAGTCACCTAGAAGTTTGCCAAAAACTACCAGTCAGAAGGCTGTTGGTTTTAAACGTGTCCGTGTAATCCTTTCTGATGATGAGGAGGAGGAAGAGAATGTTGATGAGATGGAGCATTCAAAGAGAGAGTCCTGTGATTGTCAGTTAGAGGACTTCTCTACTTCTGATACAATAAAGAGTAAAAAAAGTGGTGCCTGTCCTGCAGCTAAAATTCAGGTTGTCTCAGAGTATGGATCCAAATGTCCAATTAAGGTTGAAGAAAACAGTAGTTCTTTCAAACGCCGGAATCCTCACAGTGTGACAAGAACTGCAAGCAATTCGAGATCTTTGAGCAATGATATAGTTGCCGAAACTGATATTGCTAGTTGTTCAAAATGTGACACGAATGTCTCTGGCAAACTGTTGCACCATGGAGTCTCCTATCCCATGAAGCGTAGTTCTGAACGAGATCAAGATATTACAGTCAAGATTGAAAATGACCTCATTTACATGGAAGCAACCTCATTTGTTGTTAGTGATCAGTTGAAGCCTGAAGTTGCATGCTTATATTATCTTCAGCTTCCTAGAGAGAAAAGATCTGAGGGTTTGTTGCCCATTATTCAGCACATAAAATGTGCTGGAAGAAATTTGGAGTCCCTAGAAACTGTCGAAAATCTTAAAGAATTTCTGGGAGATGACATTGTCGAAGTTTCCGTTGATGGATGGGTTCAGAAGCGCCTAATAAAAATGTACATGGACTGCTGCGAGGAGTTGTCCGAGGTACCAAATCTCAAGGTACTCAAGAAACTATACAACTTAGAGGTTTCAGATGATGAGATTATTGTGACTGAGTGCGACCTGCAAGATTTGTCTGTCACTCCATTATTAAATGCACTGCTTTCTCACAAAAGATTTGCAATGCTTGATCTCTCTCACAACATGTTAGGAAATGGAACAATGGAGAAACTTCAGAAAGTGTTCATGGCATCCGGCCAATCTTATGGCGGCCTCACTCTGGACTTGCATTGCAATCGGTTCGGCCCAACCGCATTGTTTCAGATATGTGAATGCTCAGTCCTTTTTGCTCGTCTTGAAGTGCTTAACTTTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACTATCTTGGAAAAATGTACTGCCCTATGTAGCTTGAATGTAGAGCGCTGTCATATCACATCTAGAACCATTCAAAAGATGGCCGATGCATTGGACTCTAAATCTGTTCTAACACAGCTTTGTATAGGTTATAACAACCCTGTATCTGGAAATGCTATTGTTAATCTATTGGCCAAGCTTTCTACATTGACAAGGTTTTCTGAGTTAAATCTGAGTGGTCTAAAATTAGGCAAACAGGTTGTTGATGCCCTTTGCCAGCTTGCAGGGACCATTACTTTATCAGGATTAATGCTTGGAAGCACGGGAATAGGAAATGAAGGGGTGATGCAATTAGCGCAATCTTTGTTCAATGGGACGCAAGAACTGGTTAAACTTGACCTATCATTTTGCGGGCTTACATCTAATAACTTTTTAAATGCAGGTGTTACTTCATTTTGTTCCATTCTTGAGCTTAAGCTGGAAGGAAATCCTATTATGCCAGAGGGCAGCAACACTCTATGTTCTCTGCTAGTAGAACCACAGTGCTGTTTTAAAGTTTTAGTCCTTAGAAACTGTCAGCTTGGGCTTACTGGAATTCTCCACATAATTGAGGCACTAGCAGTGAACAACTGCCTTGAGGAGCTTAATCTAGCGGGTAATGCTGCTCCGAATGAACTTTCTTCTGTAAAACATGACTTTTCAGTAAAAGGGTGCTCAGAAAACTTGGAGCACAAACTAGATATCTGTGAATTAAGTTCTTCCATGGAAGTGGACAAAACTAAAGAGGGTCTTGGCACTCTCAACAATGGTAATTGCGAGCTTGAAGTTGCCATGGATCAAGATGATAGGATGAGACTAGAAGCGACAGCTTCTGGAATTGATGACAGTTGTGCCAGTTCATGTCAAAGAAATAATTCTTCATCTCCTAAATGCAATCAATCAATTAGGAAACTTTCAAATGCTATTGGTCTGGCAAACAACCTGCAATTACTTGACCTCAGTGATAATGGTTTCTCTTCAGAAGCTGCAGAACTGTTGTATGGCTCATGGTCATTGTCATCTTTGCGAACCCAATCAAGTCACAAGCACATTACTGCTCAGACTATTCATTTCTCAACCAGTGAAAACAAGTGCTGCAGAGTGAAGCCATGCTGCAAAAAGGATTGA 3978 0.4082 MAGHDTELRAATAAYRNAKAEANKQEEARWANVIGNILKNRGEYVEALRWLRRDYEVSLKYLPEKHLLPTCQSLGEIYLRLERFSDALTYQKKHLELARDANDLVEQQRASTQLGRTYHELFSRSEHDHLSIRNAKKYFKSAMELAQILKEDPPTNKSSFVKEYIDAHNNIGMLEMELDNLEEAKKILTRGLEICNEEEVSEDDDARSRLHHNLGNVYMELRMWEKARKHIEKDIQICNRIGHCQGEAKGYINLGEVHYRNQKYDEARSYYEKALTLAKSLEDEDALVRQIDENIKTVDKAVKVMDELKKEEQNFKKLKRYLAAARGSAHERKYLLQQNASVDRLLEKSSMIFAWEKHCEFAKEKKEIASELRDNERLSDSYLAIGESYQKLRNFNESIKWYRKSWEIYKTIGNLEGQALVKIDIGNVLDSVHNCKGALDAFEESYRIAVEANLPSVQLSALENMHYSNMIRFDNENETRRLKLLIDQLKKSIDNDPEPKYIQEDFCSETDTEAEGYLSNSGSESKMATSREDWNDDMPLMSVFKSRKQSSQSAGFIGGFSNSLEEPQQSPRSLPKTTSQKAVGFKRVRVILSDDEEEEENVDEMEHSKRESCDCQLEDFSTSDTIKSKKSGACPAAKIQVVSEYGSKCPIKVEENSSSFKRRNPHSVTRTASNSRSLSNDIVAETDIASCSKCDTNVSGKLLHHGVSYPMKRSSERDQDITVKIENDLIYMEATSFVVSDQLKPEVACLYYLQLPREKRSEGLLPIIQHIKCAGRNLESLETVENLKEFLGDDIVEVSVDGWVQKRLIKMYMDCCEELSEVPNLKVLKKLYNLEVSDDEIIVTECDLQDLSVTPLLNALLSHKRFAMLDLSHNMLGNGTMEKLQKVFMASGQSYGGLTLDLHCNRFGPTALFQICECSVLFARLEVLNFSGNRLTDACGSYLSTILEKCTALCSLNVERCHITSRTIQKMADALDSKSVLTQLCIGYNNPVSGNAIVNLLAKLSTLTRFSELNLSGLKLGKQVVDALCQLAGTITLSGLMLGSTGIGNEGVMQLAQSLFNGTQELVKLDLSFCGLTSNNFLNAGVTSFCSILELKLEGNPIMPEGSNTLCSLLVEPQCCFKVLVLRNCQLGLTGILHIIEALAVNNCLEELNLAGNAAPNELSSVKHDFSVKGCSENLEHKLDICELSSSMEVDKTKEGLGTLNNGNCELEVAMDQDDRMRLEATASGIDDSCASSCQRNNSSSPKCNQSIRKLSNAIGLANNLQLLDLSDNGFSSEAAELLYGSWSLSSLRTQSSHKHITAQTIHFSTSENKCCRVKPCCKKD 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0629 1325 SUPERFAMILY TPR-like 14 200 IPR011990 GO:0005515
Mibi09g0629 1325 SMART tpr_5 379 412 IPR019734 GO:0005515
Mibi09g0629 1325 SMART tpr_5 165 198 IPR019734 GO:0005515
Mibi09g0629 1325 SMART tpr_5 419 452 IPR019734 GO:0005515
Mibi09g0629 1325 SMART tpr_5 68 101 IPR019734 GO:0005515
Mibi09g0629 1325 SMART tpr_5 28 61 IPR019734 GO:0005515
Mibi09g0629 1325 SMART tpr_5 248 281 IPR019734 GO:0005515
Mibi09g0629 1325 SMART tpr_5 208 241 IPR019734 GO:0005515
Mibi09g0629 1325 Pfam Tetratricopeptide repeat 70 103 IPR019734 GO:0005515
Mibi09g0629 1325 FunFam Protein TONSOKU 3 157 - -
Mibi09g0629 1325 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Mibi09g0629 1325 FunFam Protein TONSOKU 815 1187 - -
Mibi09g0629 1325 SMART LRR_RI_2 922 949 - -
Mibi09g0629 1325 SMART LRR_RI_2 1118 1145 - -
Mibi09g0629 1325 SMART LRR_RI_2 1089 1116 - -
Mibi09g0629 1325 SMART LRR_RI_2 1034 1061 - -
Mibi09g0629 1325 SMART LRR_RI_2 863 890 - -
Mibi09g0629 1325 SUPERFAMILY TPR-like 158 285 IPR011990 GO:0005515
Mibi09g0629 1325 Gene3D Tetratricopeptide repeat domain 343 496 IPR011990 GO:0005515
Mibi09g0629 1325 Pfam Tetratricopeptide repeat 209 280 - -
Mibi09g0629 1325 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Mibi09g0629 1325 Coils Coil 8 28 - -
Mibi09g0629 1325 ProSiteProfiles TPR repeat region circular profile. 248 277 - -
Mibi09g0629 1325 Coils Coil 298 318 - -
Mibi09g0629 1325 Gene3D Ribonuclease Inhibitor 813 1211 IPR032675 -
Mibi09g0629 1325 Coils Coil 164 198 - -
Mibi09g0629 1325 PANTHER PROTEIN TONSOKU 1 1325 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Mibi09g0629 1325 SUPERFAMILY RNI-like 833 1293 - -
Mibi09g0629 1325 SUPERFAMILY TPR-like 361 464 IPR011990 GO:0005515
Mibi09g0629 1325 Gene3D Tetratricopeptide repeat domain 3 312 IPR011990 GO:0005515
Mibi09g0629 1325 MobiDBLite consensus disorder prediction 553 580 - -
Mibi09g0629 1325 Pfam Tetratricopeptide repeat 380 408 IPR019734 GO:0005515
Mibi09g0629 1325 Pfam Tetratricopeptide repeat 166 195 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0629 Mibi-ChrMibi09 8240031 8254061 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0629 09 8240031 8254061 Mibi09g0629 09 8240031 8254061 ECH