Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0626 ATGCTGAGCTCTGAAAATGAAGGAGATATTATTCATGATGATGATGTGTTCTTCGACTCAGCAGATTATCTGTCACCTCAAGTATCTGATTTGGGTCCCAACGATTTGGATTATGAGATTTGGGTTAATGAGCCTCAGAGTGTGAAGGAAAGAAGACAACGTTTTCTTGAGGGAATGGGTTTTTCTGGTTTACCAGATATATCTTCAAAACTCTCCTTAGGATTAGAGAGAATTAATGACAGCAATGGAACTACCTCAAATAATATAGTTGAGAGAGAAACTTCTGAAGCAAACTTTGCCTTTGATGCAATGAAAATGTGTCCTGAAGATGAAGAAGAAGAAGAAGAAGATGTAAGCTTTCATGAAACCAGATGCACAGAATCTGAGGTACCAGAAGGACATGAGGATTTCGATATAGAACAAAAGAAGAAGGAGAAGAAGAAGAAAAAGTGGTGGGAGAGATTTGTGGACAAGAGACTTGTTCACAAAGGGGAAAATAAGACCCATAGGATAAAGGTGAGGCAGAAAAAGAAGAGGTGGATGGAGTTAAGTGGGTTATATGTTGGACAAGAAATTACAGCTCACAATGGCATTATATGGACTATGAAATTCAGTCCCAATGGGAAGTATCTTGCAACCGGAGGCGAAGATGGAGTTGTAAGGATATGGCGTGTCGTGTTACGGGACATATCCAGTGGCTGTTTCAATAATGCAGAAGAAGACAGTCTTGTTGCTACAGTGAAACAAGACATGTTTTCCTCTTGGAAGAAACAGTCGAGTAAGAAGAATCCACTTGTTCTTCTTCCAAACAAGGTTTTTCAGATTGAGGAATCACCAGTTCAAGAATTCTATGGTCATTCCAGTGATGTCTTGGACTTGGCATGGTCTAATTCAGAAATTCTTCTTTCATCTTCCATGGATAAAACCGTCCGTTTGTGGCAAATTGGATGTGATCAATGCTTAAGAGTTTTTTATCACAATGATTATGTGACATGCATTCAAGGGAATCCAGTTGATGAAAATTACTTCATCAGTGGGTCCATTGATGGAAAAGTCAGAATATGGGGAGTACATGAAGAGAGGGTTGTTGACTGGGCAGATATACATGATGTGATAACTGCCATAAGTTACAAGCCAGATGGGAAAGGATTTGTAGTTGGATCCATTTCAGGCATGTGCCACTTTTATGTTACTTCAGGCAAACATTGCTCAGTGGAGGCACAGATCCATGTTGATGGAAAGAAAAGATCAAGGGGAAACAAGATTAGTGGCATTCAGTTTTTCCAGGAGAAACATCAGAGAGTTTTGATCACATCAGAAGATTCTAGATTTTGCTTATTGGAAGGGATTGATGTTGTCCACAGATACAGAGGTCTTTCTAAGTCAAGAAGTCAGATGTGTGGTTCATTTACATCAAGTGGGAAACACATGATTTCAGTTGGAGTGGATTCTCATGTATACATTTGGAACTCAAGTGACTTAAAAAACCCATCTACTAAACACAAAAAATCCACTGGTTTCTGTGAATACTTTTTCTCAAAAGGTGTTGTTGTAGCAGTACCTTGGTTAGGCATGAGCACAGACAAAATGGTCACTACTGGTTTAACACAATACTGTTCTTCAGACTTGTTACAGCCCCAAATGCTTACAGATAGAGGAAGAGGACATTGTTTTTCTCACAGAAATTGGTTTTCTGGTGATCGCATGTGTCGAAGTTCTATGACGTGGCCTGAAGAGAAGCTTCCTACGTGGAACTCACCTTCTGCAGAAGAAGAAGAAGAAGCTTATGGCCATCATCAGGAGAAGTCATGTCCAAATGATCCTTGGGGTTTGTCAATTGTGACAGCTAGTTGTGATGGGACTATAAAGACATTTAACAACTTTGGATTGCCTATTCGGATTTAA 1905 0.3958 MLSSENEGDIIHDDDVFFDSADYLSPQVSDLGPNDLDYEIWVNEPQSVKERRQRFLEGMGFSGLPDISSKLSLGLERINDSNGTTSNNIVERETSEANFAFDAMKMCPEDEEEEEEDVSFHETRCTESEVPEGHEDFDIEQKKKEKKKKKWWERFVDKRLVHKGENKTHRIKVRQKKKRWMELSGLYVGQEITAHNGIIWTMKFSPNGKYLATGGEDGVVRIWRVVLRDISSGCFNNAEEDSLVATVKQDMFSSWKKQSSKKNPLVLLPNKVFQIEESPVQEFYGHSSDVLDLAWSNSEILLSSSMDKTVRLWQIGCDQCLRVFYHNDYVTCIQGNPVDENYFISGSIDGKVRIWGVHEERVVDWADIHDVITAISYKPDGKGFVVGSISGMCHFYVTSGKHCSVEAQIHVDGKKRSRGNKISGIQFFQEKHQRVLITSEDSRFCLLEGIDVVHRYRGLSKSRSQMCGSFTSSGKHMISVGVDSHVYIWNSSDLKNPSTKHKKSTGFCEYFFSKGVVVAVPWLGMSTDKMVTTGLTQYCSSDLLQPQMLTDRGRGHCFSHRNWFSGDRMCRSSMTWPEEKLPTWNSPSAEEEEEAYGHHQEKSCPNDPWGLSIVTASCDGTIKTFNNFGLPIRI 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0626 634 MobiDBLite consensus disorder prediction 114 141 - -
Mibi09g0626 634 ProSiteProfiles Trp-Asp (WD) repeats profile. 192 225 IPR001680 GO:0005515
Mibi09g0626 634 MobiDBLite consensus disorder prediction 578 604 - -
Mibi09g0626 634 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 192 225 - -
Mibi09g0626 634 MobiDBLite consensus disorder prediction 585 601 - -
Mibi09g0626 634 SMART WD40_4 276 314 IPR001680 GO:0005515
Mibi09g0626 634 SMART WD40_4 185 224 IPR001680 GO:0005515
Mibi09g0626 634 SMART WD40_4 449 490 IPR001680 GO:0005515
Mibi09g0626 634 SMART WD40_4 317 356 IPR001680 GO:0005515
Mibi09g0626 634 SMART WD40_4 358 397 IPR001680 GO:0005515
Mibi09g0626 634 SMART WD40_4 589 626 IPR001680 GO:0005515
Mibi09g0626 634 ProSiteProfiles Trp-Asp (WD) repeats profile. 323 365 IPR001680 GO:0005515
Mibi09g0626 634 PRINTS G protein beta WD-40 repeat signature 211 225 IPR020472 -
Mibi09g0626 634 PRINTS G protein beta WD-40 repeat signature 301 315 IPR020472 -
Mibi09g0626 634 PRINTS G protein beta WD-40 repeat signature 343 357 IPR020472 -
Mibi09g0626 634 SUPERFAMILY WD40 repeat-like 187 625 IPR036322 GO:0005515
Mibi09g0626 634 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 283 315 - -
Mibi09g0626 634 Pfam WD domain, G-beta repeat 278 313 IPR001680 GO:0005515
Mibi09g0626 634 Pfam WD domain, G-beta repeat 319 355 IPR001680 GO:0005515
Mibi09g0626 634 Pfam WD domain, G-beta repeat 191 223 IPR001680 GO:0005515
Mibi09g0626 634 MobiDBLite consensus disorder prediction 119 141 - -
Mibi09g0626 634 Gene3D - 182 521 IPR015943 GO:0005515
Mibi09g0626 634 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 323 355 - -
Mibi09g0626 634 ProSiteProfiles Trp-Asp (WD) repeats profile. 283 323 IPR001680 GO:0005515
Mibi09g0626 634 PANTHER WD REPEAT DOMAIN 44 143 631 IPR040324 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0626 Mibi-ChrMibi09 8150865 8153570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0626 181 401 Miscellaneous Gene Families AT5G08390 21.239 2.75e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0626 09 8150865 8153570 Mibi09g0626 09 8150865 8153570 ECH