Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0615 ATGAGGGGTGGAACCTTACAAATCAACTGGCATGAAACCAAACCTGTTCTTTCCCTCGATTTCCACCCTCTCTCCTCCACTCTCGCCACCGCCGGCGCCGATTTCGACATCAAGCTTTGGTCTGTAAAACCTGCAGAGGCACAAAAGAAATTACCTGTAGTGTCCTATCTGAATAGCTTGTCTTACCATAGTTCTGCAGTAAATGTAATTCGCTTCTCCTCTTCAGGGGAACTCTTGGCCTCTGGTGCTGATGGAGGTGACCTTATAATATGGAAGTATCATGTGACAGATACAGATCAGACATGGAAGGTTCTCAAGATGTTAAGGTCTCATCACAAGGACATTCTGGACCTTCAGTGGTCTCCTGATGGCACGTTTTTAATTTCTGGGTCAGTTGATAATAGTTGCATTATATGGGACATTAACAAAGGCACCAATCTTCAGACATTGGACGCTCATGCCCATTATGTTCAAGGAGTTGCATGGGATCCCCTAGGGGAATATGTTGCTTCTCTTAGTTCTGACAGAACTTGCAGAATTTACATTAATAAACCTAAAAAATCTAAAGGAAGTGGGAAGATCAATTTTGTCTGCCAGCAAGTTATTTCCAAGGCAGTACATCCATTACTAGATAATTCTAAGGCAACAAATTATCATCTTTTCCATGATGAGACACTGCCATCCTTTTTCAGAAGATCAGCCTGGTCTCCTGATGGCTCATTTCTTCTTGTACCTGCAGGCTCATACAAAGTTGCTTCTGGATCTGAATCTGTAAATGCGGCTTACATATTTTCTAGAAAGGACCTCTCTCGGCCAGCCATACAGCTTCCTGGTGCAAATAAAGCTGTGGTTGCTGTCCGATTCTGCCCTGTTAAATTTAGCCTTCTGGGAATAAATTCAGCCGGGTTATTTAAACTTCCGTATCGCCTCATTTTTGCGGTGGCCACTTTGAATTCGTTATACATTTATGACACAGAGAACAATGCTCCCATAGCTATAATGGCTGGTCTCCACTATGCAACAATAACAGACATTGCATGGTCACCTGATGCTCACTATTTGGCGCTGTCCTCTCAAGATGGTTACTGCACTTTGGTGGAATTTGAAAATAACGAATTAGGAACACCTATCTCATCATCAGGAGAAAAGAAAATTTCTGACAAGGATGAGACACAGCCGAAGATATCTAGCAATCCGGTCATTGAAGCCACCGGGAATATTTGTGCAGCTGAAAAAGAAAGCTTGAAAAATGAAGCTGGAGGAAAGGCTGATGACATGATCATTGAATCAACTAGCAATGTTGGTATAATTAATGAAGGAATCAGGAAAGCTGAGGTAGAAGAGCAAAGGGACGACATGGTCCTTGACGAAACCTGCAATGTTAGTGGAGTTGAGGCAGCTGGCAGTAAAAACGAGGCACAAGAGAAGACTGATGACATGGTCATTGAGGAAACGAGCAATGTTGGTGGAGTTGTGGCAACAAGCCAGGAAAGTGCGGCAAAAGAGAAAGCTGTCGCGATCATCAATGAAACTGGGAATGTTGGTGCAGTTGTAATGGATAGCAATAAAAATGAAGCAGAGAAACAGCCAGAAAGTTCAAATATTGTGAATTTAGATGAGCAAGACAAGACTGAAAAACAACCGTCTGGTTTGGATGTTGTAAGGAAAGAAGCTGTAGAGAAGACAGAGAAACAAACATCTAGTTTGGATAAAAGGGAAGTAGAAGAAAGGGTAGCATGTACGTCAAGGGGAACGACAACATCAAATAAGACAGGCAAAAAGCGTATAACTCCCATTGCCATTGATCCATGA 1812 0.4249 MRGGTLQINWHETKPVLSLDFHPLSSTLATAGADFDIKLWSVKPAEAQKKLPVVSYLNSLSYHSSAVNVIRFSSSGELLASGADGGDLIIWKYHVTDTDQTWKVLKMLRSHHKDILDLQWSPDGTFLISGSVDNSCIIWDINKGTNLQTLDAHAHYVQGVAWDPLGEYVASLSSDRTCRIYINKPKKSKGSGKINFVCQQVISKAVHPLLDNSKATNYHLFHDETLPSFFRRSAWSPDGSFLLVPAGSYKVASGSESVNAAYIFSRKDLSRPAIQLPGANKAVVAVRFCPVKFSLLGINSAGLFKLPYRLIFAVATLNSLYIYDTENNAPIAIMAGLHYATITDIAWSPDAHYLALSSQDGYCTLVEFENNELGTPISSSGEKKISDKDETQPKISSNPVIEATGNICAAEKESLKNEAGGKADDMIIESTSNVGIINEGIRKAEVEEQRDDMVLDETCNVSGVEAAGSKNEAQEKTDDMVIEETSNVGGVVATSQESAAKEKAVAIINETGNVGAVVMDSNKNEAEKQPESSNIVNLDEQDKTEKQPSGLDVVRKEAVEKTEKQTSSLDKREVEERVACTSRGTTTSNKTGKKRITPIAIDP 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0615 603 ProSiteProfiles Trp-Asp (WD) repeats profile. 16 50 IPR001680 GO:0005515
Mibi09g0615 603 ProSitePatterns Trp-Asp (WD) repeats signature. 127 141 IPR019775 -
Mibi09g0615 603 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 108 144 - -
Mibi09g0615 603 FunFam Chromatin assembly factor 1 subunit FAS2 4 250 - -
Mibi09g0615 603 MobiDBLite consensus disorder prediction 538 579 - -
Mibi09g0615 603 ProSiteProfiles Trp-Asp (WD) repeats profile. 108 149 IPR001680 GO:0005515
Mibi09g0615 603 MobiDBLite consensus disorder prediction 521 603 - -
Mibi09g0615 603 SUPERFAMILY WD40 repeat-like 11 365 IPR036322 GO:0005515
Mibi09g0615 603 SMART WD40_4 53 92 IPR001680 GO:0005515
Mibi09g0615 603 SMART WD40_4 143 182 IPR001680 GO:0005515
Mibi09g0615 603 SMART WD40_4 101 140 IPR001680 GO:0005515
Mibi09g0615 603 SMART WD40_4 269 324 IPR001680 GO:0005515
Mibi09g0615 603 SMART WD40_4 3 41 IPR001680 GO:0005515
Mibi09g0615 603 SMART WD40_4 327 367 IPR001680 GO:0005515
Mibi09g0615 603 Gene3D - 5 206 IPR015943 GO:0005515
Mibi09g0615 603 Gene3D - 207 410 IPR015943 GO:0005515
Mibi09g0615 603 PANTHER CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B 1 603 IPR045145 GO:0006335
Mibi09g0615 603 ProSiteProfiles Trp-Asp (WD) repeats profile. 150 181 IPR001680 GO:0005515
Mibi09g0615 603 ProSiteProfiles Trp-Asp (WD) repeats profile. 60 101 IPR001680 GO:0005515
Mibi09g0615 603 Pfam WD domain, G-beta repeat 144 181 IPR001680 GO:0005515
Mibi09g0615 603 Pfam WD domain, G-beta repeat 103 140 IPR001680 GO:0005515
Mibi09g0615 603 Pfam WD domain, G-beta repeat 58 92 IPR001680 GO:0005515
Mibi09g0615 603 Pfam WD domain, G-beta repeat 11 41 IPR001680 GO:0005515
Mibi09g0615 603 PRINTS Beta G protein (transducin) signature 127 141 IPR001632 -
Mibi09g0615 603 PRINTS Beta G protein (transducin) signature 164 181 IPR001632 -
Mibi09g0615 603 PRINTS Beta G protein (transducin) signature 108 124 IPR001632 -
Mibi09g0615 603 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 60 92 - -
Mibi09g0615 603 MobiDBLite consensus disorder prediction 377 396 - -
Mibi09g0615 603 MobiDBLite consensus disorder prediction 580 594 - -
Mibi09g0615 603 CDD WD40 13 361 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0615 25 181 Miscellaneous Gene Families AT5G08390 28.662 1.32e-14 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0615 09 8015777 8021248 Mibi09g0615 09 8015777 8021248 ECH