Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0348 ATGGGAATGAAGAAGTTCTTAGTTGTTTCCGTCTTACTAGCACTAATTCTTGGTGTTGCTAAGAGCTTTGATTTGAATGAGGAAGATTTAGAATCAGAGGAAAGTTTATGGGATTTGTACGAGAGATGGAGGAGCCATCACACAGTTTCTAGAAGCCTAAGTGAGAAAAACAAGAGATTCAATGTGTTCAAAGCCAATGTTATGCATGTTCATAATACCAACAAGATGGATAAGCCTTACAAGCTCAAGTTGAATCGGTTCGCCGACATGACCAACCATGAATTCCAGACTATGTATGCTTCCTCAAAAGTCAATCACCATAGAATGTTCCGGGGCACGCCACGTGGCAGTGGGAATGGAAGCTTCATGTATGAGAAAGTTGGTAGAGTTCCTCCTTCAGTTGATTGGAGGAAAAAAGGTGCTGTCACTCCTGTAAAAGATCAAGGCCAATGTGGTAGTTGTTGGGCATTTTCAACAGTTGCAGCTGTGGAAGGTATTAATCAGATAAAAACAAAGAGCCTTGTCTCACTGTCTGAGCAAGAACTAGTAGACTGTGACACTAAAAAAAATGAAGGATGCAGTGGAGGGCTAATGGAATATGCCTATGAGTTCATCAAGCAAACTGGGGGCTTAACAACAGAAAGCAATTACCCCTATAAAGCCAAAGATGGAACCTGCGATGTATCAAAGGAGAAGAATCCATCAGTGTCAATTGATGGTCATGAGAATGTTCCTCAAAATGATGAGAACTCATTGCTCCAAGCTGCTGCAAACCAGCCTATATCTGTAGCCATAGATGCTGGAGGATCTGATTTCCAATTCTACTCTGAGGGAGTTTTTACTGGAGATTGTGGGAAGCATCTGAATCATGGGGTAACTATTGTGGGGTATGGAACAACTGTGGACGGAACAAAATATTGGATAGTTAAGAACTCATGGGGCTCTGAATGGGGAGAGCAAGGTTACATCAGGATGCAAAGGGCTATATCTGCTAAGGAAGGACTTTGTGGCATAGCAATGGAAGCTTCGTATCCAATCAAAAACTCCTCCACTAACCCAGGGGGACACCAATTATCTCCTAAAGACGAGCTTTGA 1095 0.4237 MGMKKFLVVSVLLALILGVAKSFDLNEEDLESEESLWDLYERWRSHHTVSRSLSEKNKRFNVFKANVMHVHNTNKMDKPYKLKLNRFADMTNHEFQTMYASSKVNHHRMFRGTPRGSGNGSFMYEKVGRVPPSVDWRKKGAVTPVKDQGQCGSCWAFSTVAAVEGINQIKTKSLVSLSEQELVDCDTKKNEGCSGGLMEYAYEFIKQTGGLTTESNYPYKAKDGTCDVSKEKNPSVSIDGHENVPQNDENSLLQAAANQPISVAIDAGGSDFQFYSEGVFTGDCGKHLNHGVTIVGYGTTVDGTKYWIVKNSWGSEWGEQGYIRMQRAISAKEGLCGIAMEASYPIKNSSTNPGGHQLSPKDEL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0348 364 SMART pept_c1 130 346 IPR000668 GO:0006508|GO:0008234
Mibi09g0348 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 306 325 IPR025661 -
Mibi09g0348 364 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 31 344 - -
Mibi09g0348 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 148 159 IPR000169 -
Mibi09g0348 364 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Mibi09g0348 364 PRINTS Papain cysteine protease (C1) family signature 290 300 IPR000668 GO:0006508|GO:0008234
Mibi09g0348 364 PRINTS Papain cysteine protease (C1) family signature 148 163 IPR000668 GO:0006508|GO:0008234
Mibi09g0348 364 PRINTS Papain cysteine protease (C1) family signature 306 312 IPR000668 GO:0006508|GO:0008234
Mibi09g0348 364 CDD Peptidase_C1A 131 345 IPR039417 -
Mibi09g0348 364 SUPERFAMILY Cysteine proteinases 35 347 IPR038765 -
Mibi09g0348 364 Pfam Papain family cysteine protease 130 346 IPR000668 GO:0006508|GO:0008234
Mibi09g0348 364 FunFam Senescence-specific cysteine protease SAG39 20 347 - -
Mibi09g0348 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 288 298 IPR025660 -
Mibi09g0348 364 Gene3D Cysteine proteinases 15 348 - -
Mibi09g0348 364 SMART Inhibitor_I29_2 40 95 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0348 Mibi-ChrMibi09 4327573 4330670 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0348 09 4327573 4330670 Mibi13g0526 13 7143959 7145555 CCT
Mibi09g0348 09 4327573 4330670 Mibi09g0348 09 4327573 4330670 ECH