Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0234 ATGGGGGACATCAAGCGAAAGAGAGGGCGCAAACCCAAAAATCCTGCTACTGAAATCCTAGACTTGCCTACCACTGGCACTGCCCCTAACAACAACAGCAGCCCTTCTACTAAGGATGATTACACTACCTCTCCACACTACCGTCGCCGACACATGAAGTCAACCAATCACTCTGACAAGCCTGATAAGGCACCTGCTATTTCTACTGCTAGACGGGTCTCCCGTTCTGTTGATAATGATGGAGATTTTACTGTTCCTGGTGATACAGGGGGTTCCATGGCAGTAGCGATGGCCATGGAAGTGGATCCAGTATGGGAGAATGTTTCAGCAAGAGTGGTGCCAGCAATGGACTCTGTTGTTAAGGTGTTTTGCGTGCACACAGAACCTAATTTTTCACTGCCTTGGCAAAGGAAAAGGCAGTACAGCTCTAGCAGTAGTGGGTTTGTGATCAGCGGTAGGAGGGTGCTCACCAATGCCCATTCAGTTGAGCATTACACCCAAGTGAAGCTCAAGAAACGTGGCTCCGATACCAAGTACTTGGCCACAGTGCTGGCCATTGGGACTGAGTGTGACATCGCCATGCTTACTGTTGAAGATGATGAATTCTGGCATGGAATGTCGCCTGTAGAGTTTGGGGATTTGCCCGCACTACAAGATGCTGTTATTGTTGTTGGTTATCCTATTGGTGGTGACACTATTTCAGTGACTAGTGGTGTCGTATCTCGCATTGAGATTCTATCATATGTCCATGGTTCTGCTGAACTTCTAGGATTGCAGATAGATGCTGCTATAAACTCAGGTAATTCTGGTGGGCCTGCATTTAATGATAAAGGACATTGTGTGGGAATTGCATTTCAGTCCCTCAAACATGAAGATGCAGAAAATATAGGTTATGTTATTCCAACGCCAGTTATCACACATTTCATCCGTGACTATGAGAAGAATGGAGCATATACAGGATTCCCTGTCCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATTTGCGAATGGCAATGGGCATGAGATCTGATCAGAAGGGGGTTCGTATTAGAAGAATTGATCCAACTGCTCGAGAATTTAATGTTTTGAAACCATCAGATGTGATTCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGGACAGTTCCATTTCGCCATGGAGAGCGCATTGGTTTCAGTTACCTTATATCTCAGAAATACACTGAGGATAAAGCCGTAATCAAAGTGTTGCGAAATTTAGAGATCTTGAAATTTGACATTAAACTTGGTAGTCACAAAAGGCTCATTCCAGCACATAGCAAGGGCAGGCCTCCGTCATATTATATCATTGCGGGTTTTGTTTTTACAGCTGTCTCAGTTCCATATCTTCGTTCTGAGTATGGAAAGGATTATGAATACGAAGCTCCTGTCAAGCTTTTGGATAAACTTCTGCATTCAATGCCACAATCACCAGACGAGCAACTTCTTGTGGTCTCTCAGGTGCTGGTAGCTGATATAAACATCGGGTATGAAGATATTGTTAATACTCAGGTACTTGCTTTTAATGGTAAACCTGTTAAAAACCTGAAGAGCTTGGCCAGCATGGTTGAGAACAGCAATGATGAATATCTAAAGTTCAATCTAGACTATGATCAGATAGTGGTCCTTCGGACAGCCACGGCTAAGGCCGCTACTCTTGATATTCTTGCCACACACTGCATTCCGTCAGCGATGTCGGATGATCTCAAGGGATGA 1740 0.4443 MGDIKRKRGRKPKNPATEILDLPTTGTAPNNNSSPSTKDDYTTSPHYRRRHMKSTNHSDKPDKAPAISTARRVSRSVDNDGDFTVPGDTGGSMAVAMAMEVDPVWENVSARVVPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVISGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWHGMSPVEFGDLPALQDAVIVVGYPIGGDTISVTSGVVSRIEILSYVHGSAELLGLQIDAAINSGNSGGPAFNDKGHCVGIAFQSLKHEDAENIGYVIPTPVITHFIRDYEKNGAYTGFPVLGVEWQKMENPDLRMAMGMRSDQKGVRIRRIDPTAREFNVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTEDKAVIKVLRNLEILKFDIKLGSHKRLIPAHSKGRPPSYYIIAGFVFTAVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLLVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLASMVENSNDEYLKFNLDYDQIVVLRTATAKAATLDILATHCIPSAMSDDLKG 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0234 579 Pfam PDZ domain 431 576 IPR041517 -
Mibi09g0234 579 MobiDBLite consensus disorder prediction 20 41 - -
Mibi09g0234 579 Pfam Trypsin-like peptidase domain 146 283 - -
Mibi09g0234 579 PANTHER - 32 577 - -
Mibi09g0234 579 MobiDBLite consensus disorder prediction 1 88 - -
Mibi09g0234 579 FunFam protease Do-like 9 204 314 - -
Mibi09g0234 579 Gene3D - 203 314 IPR043504 -
Mibi09g0234 579 SUPERFAMILY Trypsin-like serine proteases 114 316 IPR009003 -
Mibi09g0234 579 Gene3D - 430 579 IPR046449 -
Mibi09g0234 579 Gene3D - 96 202 IPR043504 -
Mibi09g0234 579 FunFam Protease Do-like 9 95 202 - -
Mibi09g0234 579 Gene3D - 321 429 IPR036034 GO:0005515
Mibi09g0234 579 PRINTS HtrA/DegQ protease family signature 147 159 IPR001940 GO:0004252|GO:0006508
Mibi09g0234 579 PRINTS HtrA/DegQ protease family signature 254 271 IPR001940 GO:0004252|GO:0006508
Mibi09g0234 579 PRINTS HtrA/DegQ protease family signature 363 375 IPR001940 GO:0004252|GO:0006508
Mibi09g0234 579 PRINTS HtrA/DegQ protease family signature 175 195 IPR001940 GO:0004252|GO:0006508
Mibi09g0234 579 PRINTS HtrA/DegQ protease family signature 217 241 IPR001940 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0234 Mibi-ChrMibi09 2905321 2914840 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0234 09 2905321 2914840 Mibi09g0234 09 2905321 2914840 ECH