Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2438 ATGGTTAAAGACACTGAGTATTATGATATCCTTGGCGTTACTCCCTCTGCTTCCGAGGCAGAAATTCGAAAGGCCTATTACCATAAGGCAATGCGAGTTCATCCTGATAAGAACCCGAATGATCCGCAGGCTGCTCAAAAATTTCAGATTTTGGGCGAGGCTTATCAAGTTTTAAGCGATCCTGTGCAAAGGAACGCCTACAATCAAAATGGAAAGCATTCCGTGTCTAGGGAAACTATGCTTGATCCAATGGCTGTCTTTGCCCTGCTCTTTGGGAGTGAATTATTTGAGGACTACGTTGGGCATCTAACTGCGGCATCAATGACTTCTTCTGATATGACTGATGAAATTGAAATACATGAGAAGTTGAAGGCTGTCCAAAGACAGAGGGAAGAAAAACTAACAAGTTTTTTAAAAGACTTTCTTGATCAATATGTCCGTGGTGATGAAAAGGGTTTCTTGCAACGAGCAGAATCGGAAGCCAAACGACTTTCTAATGCAGACTTTGGGCTTGATATGCTACACACCATCGGCTATATTTATTCAAGACAGGCAGCACTAGAATTAGGGAAAAAAGCCATTTATCTTGGAGTGCCTTTTTTGGCTGAATGGGTTCGACATAAAGGACATTTCTGGAAATCACAATTCACTGCCGCTAAAGGTGCATTCCATCTGCTTCAACTTCAAGAAGACATTCACAAGCAATTTAAAATGGACGGTAGTGGCCCAGAAAATGATGTTGAATGTCATATTCGCCTAAATAAGGATACTCTCATGAATTCTCTTTGGAAGTTGAATGTAGTAGACATAGAAGTGACGCTGGTACATGTCTGTCAAATGGTCCTAAGGGAAAATAATGTTAAGAGAGAAGCACTCAAAGCCCGGGCTCACGCTCTGAAGATGCTTGGGAAGTTATTTCAGGAAACGAATACAAAAGTAGGGGCATCCAAGAAGAAAACTGCGGAAGATTCAGAGGATGAAGGAAGCAGTTCAGATTCATCAGAGGATGATGAATCACCGAGAGCAGTCTCCTATCGAACGCCCTTTTTCACTCAGGGTATAGGCAGACTGTTCAAATGCCTGTGTAATCCGGCGTTTGATGTGGACGACGAGGAGGTTGTATACAGAAGCAAATGA 1137 0.4239 MVKDTEYYDILGVTPSASEAEIRKAYYHKAMRVHPDKNPNDPQAAQKFQILGEAYQVLSDPVQRNAYNQNGKHSVSRETMLDPMAVFALLFGSELFEDYVGHLTAASMTSSDMTDEIEIHEKLKAVQRQREEKLTSFLKDFLDQYVRGDEKGFLQRAESEAKRLSNADFGLDMLHTIGYIYSRQAALELGKKAIYLGVPFLAEWVRHKGHFWKSQFTAAKGAFHLLQLQEDIHKQFKMDGSGPENDVECHIRLNKDTLMNSLWKLNVVDIEVTLVHVCQMVLRENNVKREALKARAHALKMLGKLFQETNTKVGASKKKTAEDSEDEGSSSDSSEDDESPRAVSYRTPFFTQGIGRLFKCLCNPAFDVDDEEVVYRSK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2438 378 SMART dnaj_3 5 63 IPR001623 -
Mibi08g2438 378 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Mibi08g2438 378 CDD DnaJ 6 60 IPR001623 -
Mibi08g2438 378 Pfam X-domain of DnaJ-containing 127 316 IPR026894 -
Mibi08g2438 378 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 332 - -
Mibi08g2438 378 Pfam DnaJ domain 6 68 IPR001623 -
Mibi08g2438 378 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Mibi08g2438 378 MobiDBLite consensus disorder prediction 313 343 - -
Mibi08g2438 378 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Mibi08g2438 378 Gene3D DnaJ domain 1 85 IPR036869 -
Mibi08g2438 378 PRINTS DnaJ domain signature 43 63 IPR001623 -
Mibi08g2438 378 PRINTS DnaJ domain signature 8 26 IPR001623 -
Mibi08g2438 378 PRINTS DnaJ domain signature 26 41 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2438 Mibi-ChrMibi08 42158734 42161691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2438 7 81 Miscellaneous Gene Families AT1G16680 40.260 1.11e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2438 08 42158734 42161691 Mibi08g2438 08 42158734 42161691 ECH