Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2425 ATGTGTTTAATAGAAGAATACCAAAGAAACCTTCTTCTCGCTTCATCCGCCAAGGGACCTCTAAAACCATCTTCAAGTTATATGGCAGAGGTGGAAACGCTACATCTGAGGGCCTTAATACTCAGCGAAAAGCGAGGAGAGAGGAGAGTGAAGGAAGAAGACGAGACTCGAGAGGAATCGGAAGGAAGAGGGGAAATGAAAGTGACATGGAAGAACAACAAGAAACGCTCTTTACCGGCCGTCTCCGATTTCAGCAACCTTCCTTTTGAGCGCCAAGAGGATGATGATGTCATCCCTCAATCTCATCAACACCTTGCTCGTTTGCAGGGAAATCAAGATGCCAAAATCCAAGATAGTCCCCATCACTCCGACGACTTATCGGAGGCAAGACGTCTGGCCAAACAATTTCAAGCTCAGGGAGACAAGCTTGCTGAGGATGGGAAGTATGGGGAAGCATTGGGTAAATGGGAGTCTGCTCTGTCATTGACACCTGAAGTTGCGGTTTTACATGAACAGAAGGCCCAAGTTCTTCTAGAAATTGGAGATGCTTGGAATGCTTTGAAGGCTGCAATGCGAGCTACGGAATTGCAGCCATCATGGGCTGAGGCATGGGTCACGCTTGGCAGGGCACAGCTAAATTTTGGCGAGCCTGACTGTGCTACTGATAGCTTTGACAAAGCCCTATCTATCAAGCCTGATTGCTCGGATGCTCAAGAAGACAGAAAAACTGCATTACGTCTCGTAAAGAAGAGAAAGCAACTCCACTCAACAGGCTTGAGTAATACTGAAAATCGCTATGCGGTAGGTGATAAAGATGAAAGTGCTTGA 828 0.4686 MCLIEEYQRNLLLASSAKGPLKPSSSYMAEVETLHLRALILSEKRGERRVKEEDETREESEGRGEMKVTWKNNKKRSLPAVSDFSNLPFERQEDDDVIPQSHQHLARLQGNQDAKIQDSPHHSDDLSEARRLAKQFQAQGDKLAEDGKYGEALGKWESALSLTPEVAVLHEQKAQVLLEIGDAWNALKAAMRATELQPSWAEAWVTLGRAQLNFGEPDCATDSFDKALSIKPDCSDAQEDRKTALRLVKKRKQLHSTGLSNTENRYAVGDKDESA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2425 275 Pfam Tetratricopeptide repeat 201 234 IPR019734 GO:0005515
Mibi08g2425 275 MobiDBLite consensus disorder prediction 46 71 - -
Mibi08g2425 275 MobiDBLite consensus disorder prediction 101 127 - -
Mibi08g2425 275 PANTHER OSMOSIS RESPONSIVE FACTOR 66 274 - -
Mibi08g2425 275 Gene3D Tetratricopeptide repeat domain 123 268 IPR011990 GO:0005515
Mibi08g2425 275 SMART tpr_5 167 200 IPR019734 GO:0005515
Mibi08g2425 275 SMART tpr_5 201 234 IPR019734 GO:0005515
Mibi08g2425 275 SMART tpr_5 133 166 IPR019734 GO:0005515
Mibi08g2425 275 SUPERFAMILY TPR-like 133 252 IPR011990 GO:0005515
Mibi08g2425 275 ProSiteProfiles TPR repeat profile. 201 234 IPR019734 GO:0005515
Mibi08g2425 275 MobiDBLite consensus disorder prediction 256 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2425 Mibi-ChrMibi08 42008756 42013300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2425 126 269 Glycosyltransferase AT3G04240 23.270 3.89e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2425 08 42008756 42013300 Mibi08g2425 08 42008756 42013300 ECH