Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2398 ATGTTGGCCATGGATGTGAAACACAGGGGAATCCCAATGTCCCTCTTGTTCTTTCTGGGATTGTCTTCTTTTTTCCCTCTCTGTTTCTCCGATGTCACTCAACCCAGTCTCGCCAAAAAGCCAAAACCTTTGACTTCCAACAATCCCATTGGCTCCTCCGTTGTTTTCCAGGTTCAAGGCAACGTGTATCCCCTCGGGTATTACTCAGTCTCCCTGAGCATTGGTAATCCCCCAAAAGCTTACGACCTTGACATTGACTCGGGCAGCGACCTCACCTGGGTACAGTGCAACGCACCGTGTAAAGGTTGCACCAAGCCTCCGAATCAGCAGTATAAGCCGAAGAACAACCTCGTCCCTTGTGGGGACCAGTTATGTGGTGGGGTCCAGTCAGCACCGGGCCATCACTGTCAATCCCCCAATGAACAATGCGACTATGAGGTTGAGTATGCAGACCACGGCTCATCAATGGGTGTTCTGGTCCGAGACTATATTCTCCTCCGGGTCACCAACGGGTCGGTTCTCGGTCCTCGGTTGGGTTTCGGGTGTGGGTACGATCAAAGCTATCCTGGTCCAATGGCGCCACCATCTACAGCAGGGGTGTTAGGTCTTGGTAATGGCAAGTCGGGTATTTTGTCACAGCTTACATCATTGGGACTGATCCGAAATGTGGTGGGTCACTGCCTAAGTGGACGTGGTGGAGGTTTTTTGTTTTTTGGAGATCGTCTTGTTCCTTCCTCTGGTGTTTCTTGGACCCCAATCTTGCCTGGTTCCTCTGTAAAACACTATGTCTCTGGACCAGCGGATTTGATTTTTAATGCAAAGCCAACTTCTGTGAAGGGCCTTCAGGTTATCTTTGACAGTGGAAGCTCCTACACATACTTCAATTCCAATGCTTATCAAGCCATTCTTAATACGATAGTTGATGATTTGAAGGGGAAGCAATTGAGCAGAGCAACAGCAGATAAGACCCTTCCAGTTTGCTGGAAAGGAACAAAGCCATTCAAATCTTTAACAGATGTGGCCAACCTTTTTAAGCCCTTAACATTGAGCTTTACAACGGCAAAGAATGTACAGCTGAATTTGCCACCATCGTCTTATCTCATTCTCACGAAATATGGCAATGTTTGCTTGGGAATTCTTAATGGCTCTGAAGCTGGACTGGGAAATCTTAACATCATTGGAGACATCTTTCTACAAGACAAAATGGTGATTTATGACAATGAGAAAAGGCAGATTGGATGGATTCCCGCAAACTGCGATAGAATTCCTAAGTCATAA 1278 0.4695 MLAMDVKHRGIPMSLLFFLGLSSFFPLCFSDVTQPSLAKKPKPLTSNNPIGSSVVFQVQGNVYPLGYYSVSLSIGNPPKAYDLDIDSGSDLTWVQCNAPCKGCTKPPNQQYKPKNNLVPCGDQLCGGVQSAPGHHCQSPNEQCDYEVEYADHGSSMGVLVRDYILLRVTNGSVLGPRLGFGCGYDQSYPGPMAPPSTAGVLGLGNGKSGILSQLTSLGLIRNVVGHCLSGRGGGFLFFGDRLVPSSGVSWTPILPGSSVKHYVSGPADLIFNAKPTSVKGLQVIFDSGSSYTYFNSNAYQAILNTIVDDLKGKQLSRATADKTLPVCWKGTKPFKSLTDVANLFKPLTLSFTTAKNVQLNLPPSSYLILTKYGNVCLGILNGSEAGLGNLNIIGDIFLQDKMVIYDNEKRQIGWIPANCDRIPKS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2398 425 Pfam Xylanase inhibitor N-terminal 68 240 IPR032861 -
Mibi08g2398 425 FunFam Aspartyl protease family protein 45 240 - -
Mibi08g2398 425 Gene3D Acid Proteases 242 422 IPR021109 -
Mibi08g2398 425 ProSiteProfiles Peptidase family A1 domain profile. 68 415 IPR033121 -
Mibi08g2398 425 PANTHER ASPARTYL PROTEASES 60 413 IPR001461 GO:0004190|GO:0006508
Mibi08g2398 425 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 283 294 IPR001969 GO:0004190|GO:0006508
Mibi08g2398 425 Gene3D Acid Proteases 45 240 IPR021109 -
Mibi08g2398 425 PRINTS Pepsin (A1) aspartic protease family signature 283 294 IPR001461 GO:0004190|GO:0006508
Mibi08g2398 425 PRINTS Pepsin (A1) aspartic protease family signature 74 94 IPR001461 GO:0004190|GO:0006508
Mibi08g2398 425 PRINTS Pepsin (A1) aspartic protease family signature 391 406 IPR001461 GO:0004190|GO:0006508
Mibi08g2398 425 FunFam Aspartic proteinase Asp1 isoform A 244 423 - -
Mibi08g2398 425 SUPERFAMILY Acid proteases 60 422 IPR021109 -
Mibi08g2398 425 Pfam Xylanase inhibitor C-terminal 279 414 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2398 Mibi-ChrMibi08 41721363 41723690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2398 52 425 Miscellaneous Gene Families AT1G44130 62.933 3.63e-176 496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2398 08 41721363 41723690 Mibi08g2398 08 41721363 41723690 ECH