Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2278 ATGCTATACTCCCCACTCTCTTCACCATTCCTCTTCATTCCACTATGCCACCACGCCCCCACTTCATCTCTCTCACCCCCTCTGCTTCCGAACAATAGCTCAATCTCCAAAGAATTTGCAGGCAAAACAATTCCAGGGGGGAGTGAAAATTCAGTTTCAGAGATGTCAGGAGGTGGGTGTAGCATAGTGTGGTTCAGAAGAGATCTGAGATTGGAGGATAATCCAGCTCTGACGGCGGGAATGAGATCCGGCGCTGTGGTCGCTTTGTTTATATGGGCGCCTGAAGAAGAAGGTCAATACCAGCCGGGAAGGGTTTCCAGGTGGTGGCTCAAGCAAAGTTTGGCTCACCTTGATTCTTCTTTGAGAAATCTTGGCACTTCTCTTATCACCAAGCGATCCACTGATACTGTTTCTTCTCTCCTCGAGGTTGTCAGTGCCACTGGGGCTACTCAACTCTTCTTTAATCACTTATACGATCCCCTGTCACTTATTAGGGATCACCGGGCTAAGGAGGTTTTGACTGCTCAAGGCATAGCCGTGCGTTCCTTCAATGCGGATTTATTGTATGAACCGTGGGAAGTCAATGATGACCATGGACAGGCATTCACCACTTTTTCCACTTTTTGGGAAAGATGCCTCAACATGCCTTATGATCCGGAGGCACCTCTTCTTCCGCCTAAAAAAATTATTGCAGGTGATGTATCAAAGTGCCCTTCTGATCCTTTGGTGTTTGAAGATGAATCAGAGAAGGCAAGCAATGCACTTCTTGCCCGAGCTTGGTCACCTGGATGGAGCAATGCCGACAAGGCCTTGACTGCATTCATAAATGGCCCATTGATTGAGTATTCAAAAAATCGCAGGAAAGCTGACAGTGCCACAACCTCATTTCTTTCCCCCCATTTGCATTTTGGAGAGTTGAGTGTAAAGAAGGTCTTCCATCTTGTACGGATTAAGCAGGTTTTATGGGCCAACGAAGGGAACAAGGCTGGTGAAGAAAGTGTCAACCTGTTTCTCAAGTCTATTGGTCTCAGAGAGTATTCAAGGTACATTAGTTTCAACCATCCCTATAGCCATGAAAGGCCTCTTCTGGGCCACCTTAAGTTCTTTCCTTGGGTGGTAAATGAAGCCTATTTTAAGGCATGGAGGCAAGGAAGAACTGGGTACCCCTTGGTGGATGCCGGGATGAGGGAATTGTGGGCCACTGGTTGGCTGCATGATCGGATACGTGTTGTTGTTTCCAGTTTCTTTGTGAAGGTTCTGCAGCTTCCCTGGAGATGGGGAATGAAATACTTTTGGGACACACTCCTAGATGCAGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATATCAGGTACTCTCCCTGATGGCCGTGAATTTGACCGAATAAATAACCCACAGTTTGAGGGATACAAGTTTGATCCAAATGGAGAATATGTACGAAGATGGCTTCCAGAACTCTCCAGACTACCAACTGAATGGATACATCACCCATGGAATGCACCAGAGTCTGTACATCAAGCTGCTGGAATTGAATTAGGGTATAATTATCCTTTTCCTATTGTGGGATTAGATGCAGCAAAAGCCCGATTGGAAGAAGCACTATTACAAATGTGGCAACAAGAAGCAGCTTCAAGAGCCGCAATTGAAAATGGAACTGAGGAAGGGCTTGGAGACTCCTCTGAATCAGTACCTTTTGCCTTTCCTCAGGATATACAAATGGAGGAAAGACATGATCCTGTTAGGAACAACCCCATTTCTGTTGCCCAGTCCTACGAGGATCAAATGGTCCCAAGCATCACTTCCCAAGTGAGGGTGGAAGATGAAGAAGCCTCTTCAGATCATCGAAACGCAACAGTAGATAGCAGAGCTGAAGTGCCGATGAATGTAAATGTACAACAGAATGCAAGAGATACATTGAACCAGGGGCCTAACCAAGGGCCTTTGCAGGTTGTTTACAGGAATACTCGAATACAGAATGGTGCAACCGGACAGAGAAATGTGGCTGAAGATTCTACGGCAGAATCTTCAAGTATTAGTAGTAGGAGAGATGGAGGTGTAGTTCCTGGGCTACCTCATCTTACTTGCAGACGCATCCTCAGTCTCACCAACTCATGA 2118 0.4632 MLYSPLSSPFLFIPLCHHAPTSSLSPPLLPNNSSISKEFAGKTIPGGSENSVSEMSGGGCSIVWFRRDLRLEDNPALTAGMRSGAVVALFIWAPEEEGQYQPGRVSRWWLKQSLAHLDSSLRNLGTSLITKRSTDTVSSLLEVVSATGATQLFFNHLYDPLSLIRDHRAKEVLTAQGIAVRSFNADLLYEPWEVNDDHGQAFTTFSTFWERCLNMPYDPEAPLLPPKKIIAGDVSKCPSDPLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYSKNRRKADSATTSFLSPHLHFGELSVKKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEAYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRINNPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESVHQAAGIELGYNYPFPIVGLDAAKARLEEALLQMWQQEAASRAAIENGTEEGLGDSSESVPFAFPQDIQMEERHDPVRNNPISVAQSYEDQMVPSITSQVRVEDEEASSDHRNATVDSRAEVPMNVNVQQNARDTLNQGPNQGPLQVVYRNTRIQNGATGQRNVAEDSTAESSSISSRRDGGVVPGLPHLTCRRILSLTNS 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2278 705 Gene3D - 188 347 - -
Mibi08g2278 705 Gene3D HUPs 62 260 IPR014729 -
Mibi08g2278 705 MobiDBLite consensus disorder prediction 661 683 - -
Mibi08g2278 705 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 248 542 IPR036134 -
Mibi08g2278 705 ProSitePatterns DNA photolyases class 1 signature 2. 406 425 IPR018394 -
Mibi08g2278 705 MobiDBLite consensus disorder prediction 607 621 - -
Mibi08g2278 705 Pfam DNA photolyase 61 216 IPR006050 -
Mibi08g2278 705 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 61 231 IPR036155 -
Mibi08g2278 705 MobiDBLite consensus disorder prediction 661 690 - -
Mibi08g2278 705 Pfam Blue/Ultraviolet sensing protein C terminal 565 678 IPR020978 -
Mibi08g2278 705 Coils Coil 524 544 - -
Mibi08g2278 705 MobiDBLite consensus disorder prediction 604 624 - -
Mibi08g2278 705 FunFam Deoxyribodipyrimidine photo-lyase 355 544 - -
Mibi08g2278 705 PANTHER CRYPTOCHROME 60 544 IPR002081 -
Mibi08g2278 705 PRINTS DNA photolyase signature 406 424 IPR002081 -
Mibi08g2278 705 PRINTS DNA photolyase signature 386 402 IPR002081 -
Mibi08g2278 705 PRINTS DNA photolyase signature 445 459 IPR002081 -
Mibi08g2278 705 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 59 188 IPR006050 -
Mibi08g2278 705 TIGRFAM crypt_chrom_pln: cryptochrome, plant family 60 535 IPR014134 GO:0009785|GO:0009882
Mibi08g2278 705 ProSitePatterns DNA photolyases class 1 signature 1. 386 398 IPR018394 -
Mibi08g2278 705 Pfam FAD binding domain of DNA photolyase 337 534 IPR005101 -
Mibi08g2278 705 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 355 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2278 Mibi-ChrMibi08 40526919 40535502 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2278 08 40526919 40535502 Mibi08g2278 08 40526919 40535502 ECH