Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2256 ATGGCACTCTCCAACGTCTTCATTATTATGTGTGTACTCCTAGCAATCAACATGGCCGTGCCGGCGGTGGCCAAATCCTACACTGTCGGAGATACCTCCGGTTGGGCGATCGGCGCTGATTATGGCACCTGGGCTAGCGGCAAAACCTTCCAAGTTGGTGATTCTCTAGTGTTTAACTATGGAGGCGGGCACACAGTGGATGAAGTGAAAGAGAGTGACTACAAATCATGTACAACAGGGAATTCAATTTCTACAGATAGCAGTGGAGCCACCACCATTACACTAAAGACAGCAGGAACTCACTACTTCATATGTGCAGCTCCAGGACATTGTAGTGGTGGCATGAAGCTTTCTGTTGATGTTAAGGCCGGAAAAGCCTCCGCTCCCTCTGCTACTCCTTCCTCCGGTAAGGGCTCGCCGGCCGATGATACCCCCACCGCCGGCACCACCACCCCGACGGCGCATTCGACTTCTTCAGCCGCTGGAATTTCACCCGTTGCTGCTATGGTGACTGTTTCTTGGGTTTCATACTCTCTGCTGCGCCTGCTATGA 552 0.5236 MALSNVFIIMCVLLAINMAVPAVAKSYTVGDTSGWAIGADYGTWASGKTFQVGDSLVFNYGGGHTVDEVKESDYKSCTTGNSISTDSSGATTITLKTAGTHYFICAAPGHCSGGMKLSVDVKAGKASAPSATPSSGKGSPADDTPTAGTTTPTAHSTSSAAGISPVAAMVTVSWVSYSLLRLL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2256 183 PANTHER BLUE COPPER PROTEIN 23 141 IPR039391 GO:0009055
Mibi08g2256 183 MobiDBLite consensus disorder prediction 128 160 - -
Mibi08g2256 183 SUPERFAMILY Cupredoxins 24 121 IPR008972 -
Mibi08g2256 183 MobiDBLite consensus disorder prediction 126 160 - -
Mibi08g2256 183 ProSitePatterns Type-1 copper (blue) proteins signature. 99 115 IPR028871 -
Mibi08g2256 183 Gene3D - 23 128 IPR008972 -
Mibi08g2256 183 ProSiteProfiles Phytocyanin domain profile. 25 123 IPR003245 GO:0009055
Mibi08g2256 183 CDD Phytocyanin 25 121 - -
Mibi08g2256 183 FunFam Blue copper 23 127 - -
Mibi08g2256 183 Pfam Plastocyanin-like domain 35 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2256 Mibi-ChrMibi08 40280461 40281311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2256 8 127 Miscellaneous Gene Families AT1G22480 54.167 9.55e-38 126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2256 08 40280461 40281311 Mibi08g2256 08 40280461 40281311 ECH