Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2168 ATGGGGACTGGATGGAGAAGAGCCTTTTGCACTCGTGACCCTGAATCTGCCATTTCCGATAAGCGTCATCACAGAGGTACGAGTCCGAGCCCCAGCCCCAGCCCAAGAAGCTGTGTTCGATTGGGTTTTCTAAGCAATCCTTCCACTCCACGCTTGAATAATCAGCAATCTCAGCCTGTTTCTAGCCCCAGCTTGCGTTGTCGAACAGTTTCAGAAGCAGCTAATGGCGTGAACGAGAGCCCCAGATTTCAAAGCAAGAATAATACTCCCAGGGCTACCAAATCCCCCAAAATCAGTTCCACCTCAAATCCAACCTCTCCTCGTTCTCCTTTGAAGTTATCCCTCTTCAGGAACAGCTTCAAATTTCGGAGTAGTTGTGGAATCTGCTTGAACAGCGTGAAAACCGGTCAGGGGACGGCCATTTACACTGCGGAATGTACTCACGCGTTCCACTTCCCGTGTATCGCCGATTATGTACGCAAACATGGAAATCTCGTCTGCCCAGTCTGCAACGCTTCCTGGAAAGAAGTGCCCCTCCTAGCCGCACACAAGAACAACGACGTCGTCGTTGTTGACAAGACCGTCGTAAAACCAAATGCCACCCATAGCCAGAAGTCCAAGGAAGCCTCATCTCCAGTCTTCAGAACCAAGCCTCTTGAATCTCCCCAACAATTACCACAAAAACAGCCAAAGCAACCTGATCCGTACAGGTCCTACGACGACGACGAGCCACTCCTATCTCCCACCGCCGGTGGTAGAATCATTCCGATTCCTGAAGCTGATGAAGACGCAGAGGAAGAAAACGAAGACGACGTTGAAGAATTCCAAGGGTTTTTCACCAATGCGAAATCCTCATCCTCATCCTCAATCAGATCCTACTCAGACGACCTTCAAACAACCGAAAAAGATTATTCCAGAAACGTTCAGGTGAAATTGATGCCCGAGTGTGCCGTCGTATCAGTCTCTCGCACCCACGAGACATACGCTTTGGTCCTGAAAGTGAAGGCTCCGCCGCCTCCGTTGCGTAACGGGAACAACAGTACAACGGCGCGTGTCGGCCAATCGCAGCGAGCTCCCATAGATCTAGTAACGGTTCTCGACGTTGGAGGAAGCATGACAGGCGCGAAGCTTCACATGCTCAAGCGTGCGATGCGTTTGGTCATTTCCTCGCTCAGCCCAGCCGATCGGCTCTCCATTGTGGCTTTCTCGGCTACCTCCAAACGGCTCTTGCCTTTGAGAGGAATGACGGCTCAAGGTCAGCGCGTGGCTCGGCGCATCATTGACCGTCTCGTTTCGGGTCACGGAACTTGTGTAGGCGATGCTCTTAGAAAAGCCACCAAAGTACTCGAAGACCGGAGGGAGAGAAACCCGGTCGCCAGCGTCATGCTCTTATCGGACGGTCAGGATGAACGAGTCCAAACCAGTAACAACAACCAACGGAAGCCGTCCAGCCACGTGTCGTCCACCCGGTTCGCTCACATAGAGATTCCGGTTCACGCGTTCGGCTTCGGGAGGAAAACCGGGTTCAGCCACGAGCCGGGTGAGGATGCGTTTGCGAAATGTGTGGGCGGGTTATTGAGTGTTGTTATACAAGACTTGAGGATTCAGCTCGGTTTCCAGTCCGGCTCATCGGCGGCTGAAATAAGCGGAATCTATTTATGCGGCGGGAGAACCACGGCTTTGAGCTCAGGATGCGTTCGGCTCGGCGATTTATACGCGGAGGAGGAGAGGGAATTACTAGTCGAGCTGAGGGTCCCAGCTTCGGCGTGTGGGGCCCACCACGTGATGAAGGTACGGTGCTTGTATAAGGACCCTGTCTCACAAGAGATTGTGTCAAGTAAGGAACAGGCGTTACTGGTTCCGCCACCTCAGGGCTCGAGGAGTGAGCGGTTGAGGAATTTCTTCATAGCGACTCGGGCCATAGCCGAGTCGCGCCGGCTCGTTGAGCATAGTGATTTCACGAGTGCTCATCATCTGCTGGCTTCGGCTCGAGCGCTGTTGGTTCAGGCAAAATCGAGCTCGGCTGAGGAGCACGTGCGAGCGTTGGAGGCTGAGCTGGCGGAGCTTCATTGGAGGACTCAGAATCCGATGGAGCAGCAGGTGATGACGCAGGAACGGAGTGGTTTGGTGGATGATAATGGTGAGCCGCTTACGCCCACTTCGGCTTGGAGAGCCGCTGAGAAGCTGGCTAAGGTGGCTATCATGAAGAAGTCGTTGAATAGAGTCAGCGACTTGCACGGCTTCGAAAACGCTAGGTTTTGA 2262 0.5345 MGTGWRRAFCTRDPESAISDKRHHRGTSPSPSPSPRSCVRLGFLSNPSTPRLNNQQSQPVSSPSLRCRTVSEAANGVNESPRFQSKNNTPRATKSPKISSTSNPTSPRSPLKLSLFRNSFKFRSSCGICLNSVKTGQGTAIYTAECTHAFHFPCIADYVRKHGNLVCPVCNASWKEVPLLAAHKNNDVVVVDKTVVKPNATHSQKSKEASSPVFRTKPLESPQQLPQKQPKQPDPYRSYDDDEPLLSPTAGGRIIPIPEADEDAEEENEDDVEEFQGFFTNAKSSSSSSIRSYSDDLQTTEKDYSRNVQVKLMPECAVVSVSRTHETYALVLKVKAPPPPLRNGNNSTTARVGQSQRAPIDLVTVLDVGGSMTGAKLHMLKRAMRLVISSLSPADRLSIVAFSATSKRLLPLRGMTAQGQRVARRIIDRLVSGHGTCVGDALRKATKVLEDRRERNPVASVMLLSDGQDERVQTSNNNQRKPSSHVSSTRFAHIEIPVHAFGFGRKTGFSHEPGEDAFAKCVGGLLSVVIQDLRIQLGFQSGSSAAEISGIYLCGGRTTALSSGCVRLGDLYAEEERELLVELRVPASACGAHHVMKVRCLYKDPVSQEIVSSKEQALLVPPPQGSRSERLRNFFIATRAIAESRRLVEHSDFTSAHHLLASARALLVQAKSSSAEEHVRALEAELAELHWRTQNPMEQQVMTQERSGLVDDNGEPLTPTSAWRAAEKLAKVAIMKKSLNRVSDLHGFENARF 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2168 753 SUPERFAMILY vWA-like 359 508 IPR036465 -
Mibi08g2168 753 SMART ring_2 126 170 IPR001841 -
Mibi08g2168 753 Gene3D von Willebrand factor, type A domain 361 521 IPR036465 -
Mibi08g2168 753 Pfam von Willebrand factor type A domain 362 468 IPR002035 -
Mibi08g2168 753 Pfam RING-like zinc finger 126 155 IPR001841 -
Mibi08g2168 753 MobiDBLite consensus disorder prediction 28 110 - -
Mibi08g2168 753 MobiDBLite consensus disorder prediction 468 488 - -
Mibi08g2168 753 CDD vWA_C3HC4_type 360 529 - -
Mibi08g2168 753 MobiDBLite consensus disorder prediction 13 27 - -
Mibi08g2168 753 ProSiteProfiles Zinc finger RING-type profile. 126 171 IPR001841 -
Mibi08g2168 753 MobiDBLite consensus disorder prediction 1 110 - -
Mibi08g2168 753 MobiDBLite consensus disorder prediction 199 255 - -
Mibi08g2168 753 ProSiteProfiles VWFA domain profile. 361 504 IPR002035 -
Mibi08g2168 753 SMART VWA_4 359 543 IPR002035 -
Mibi08g2168 753 MobiDBLite consensus disorder prediction 199 231 - -
Mibi08g2168 753 CDD RING-H2 126 171 - -
Mibi08g2168 753 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 124 748 - -
Mibi08g2168 753 SUPERFAMILY RING/U-box 120 177 - -
Mibi08g2168 753 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 181 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2168 Mibi-ChrMibi08 39190187 39192550 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2168 08 39190187 39192550 Mibi08g2168 08 39190187 39192550 ECH