Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2167 ATGGATCTTCTATTTTATGTTGACATGAACTGTGCTAGTTCAAGGTACGATCTTTACTTCGCTTGGCACCAACCCCTCCACGCGTTTCTCAATCTACCCTTTCAATTGGTTCACCCTCACATCCCAAACATCACTTTTGGAATTCCTTCAACATCTACCACAACAGAACGATTCCTTCCTGAGACATTTTCGTCTCATCTCTTCTTCTTTCAACTCCCCCCATCAATTATTCCTCTCTGCGATCTCGGATTAGGGTTCGACGCAGTCTCAATGGCTGTTTCAACCGGCTTTTCCGGCGCCAAATTGGAGGCCCTTTTGCTCAAATCTTCTTCCCCTGCTTCCAGGGCTTCCTCTGGTGCTCGATTTTCGGATTTTGGGAAATCTGGTGCGATTAAGAAGGCCGTGATTCAGAGAGGAATAATTCGTTGTGAGGCTTCTGTTCCTGAGGTGTTGATCAAGGAATATGATCCAAGTAATGGCAACAGTCTCTCTGCTCTTGAGCAGCTCAAGACATCTGCTGTAGACAGATATACAAAGGAAAGGAGCAGCATTGTTGTCATCGGGCTCAGTGTGCATAGTACACCTGTGGAAATGCGAGAAAAGCTTGCTATTCCAGAAGCAGAGTGGCCTCAAGCCATTGGAGAGCTGTGTGGTCTGAATCATATTGAAGAAGCGGCTGTACTGAGCACCTGCAACAGAATGGAGATATATGTTGTTGCTTTGTCCCAGCACCGTGGTGTCAAAGAGGTCACTGAATGGATGTCAAAAAAAAGCGGCGTCCCTGTTTCGGAGCTTTGCGAGCATCGGTTCTTGCTTTACAACAAGGATGCTACACAGCATCTTTTTGAAGTGTCTGCAGGTCTTGACTCTCTTGTATTGGGAGAAGGTCAAATCCTTGCGCAGGTTAAGCAGGTAGTTAAAGTTGGGCAGGGCATTAATGGCTTTGGGAGAAACATCAGTGGGCTGTTCAAACATGCAATTACTGTGGGGAAGAGGGTTAGAACTGAAACAAATATTGCCGCTGGTGCGGTTTCTGTGAGCTCAGCTGCTGTGGAATTGGCCTTGATGAAGCTACCTGAAACCTCACATGACAAGGCCAGTATGTTGGTTATTGGAGCTGGCAAGATGGGAAAGCTTGTAATCAAACATTTGGTGGCTAAAGGTTGCACTAAGATGGTGGTTGTCAATAGAACCGAGGAGAGAGTTGCAGCGATCCGTGAAGAACTGAAGGATGTTGAAATTATATATAAACCCCTTTCAGAAATGCTCTCCTGTGCTGGTCAAGCAGATGTCGTTTTTACCAGCACCGCATCAGAAAGCCCCTTGTTCTTGAAAGATCACGTACAGGGCCTTCCTCCTGCAAGTCAAAATGTTGGAGGTCTTCGTCTCTTTGTTGATATCTCTGTTCCTCGCAATGTAGGTTCTTGTGTCTCGGATGTTGATTCTGCGAAAGTTTACAATGTTGATGACCTTAAGGAGGTTGTGGCTGCTAATAAAGAAGACCGGCTAAGAAAAGCAATGGAGGCTCAGGCAATCATCACCGAGGAGTCAAAACAATTTGAAGCTTGGAGGGACTCTCTGGAAACTGTACCTACCATCAAGAAATTGAGGGCTTACGCCGAAAGAATCAGGGCTGCCGAGCTTGAGAAATGCCTAAGTAAGATGGGAGATGATATCCCAAAGAAGACAAGGAGGGCTGTGGATGACCTTAGCCGGGGCATAGTGAATAAGCTGCTCCATGGTCCAATGCAACACCTTAGATGTGATGGGAGTGACAGCCGGACTCTTAGCGAGACCCTTGAGAACATGCATGCTTTGAATAGAATGTTCAGTCTTGAGACAGAAGTATCAATTTTGGAGCAGAAGATTCGAGCCAAGGTGGAACAAAATCAGAAGTAA 1899 0.4608 MDLLFYVDMNCASSRYDLYFAWHQPLHAFLNLPFQLVHPHIPNITFGIPSTSTTTERFLPETFSSHLFFFQLPPSIIPLCDLGLGFDAVSMAVSTGFSGAKLEALLLKSSSPASRASSGARFSDFGKSGAIKKAVIQRGIIRCEASVPEVLIKEYDPSNGNSLSALEQLKTSAVDRYTKERSSIVVIGLSVHSTPVEMREKLAIPEAEWPQAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKKSGVPVSELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGINGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPETSHDKASMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRTEERVAAIREELKDVEIIYKPLSEMLSCAGQADVVFTSTASESPLFLKDHVQGLPPASQNVGGLRLFVDISVPRNVGSCVSDVDSAKVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRAAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEVSILEQKIRAKVEQNQK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2167 632 Hamap Glutamyl-tRNA reductase [hemA]. 183 610 IPR000343 GO:0008883|GO:0033014|GO:0050661
Mibi08g2167 632 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 342 502 IPR036291 -
Mibi08g2167 632 Gene3D - 343 495 - -
Mibi08g2167 632 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 506 592 IPR036453 GO:0008883|GO:0033014|GO:0050661
Mibi08g2167 632 FunFam Glutamyl-tRNA reductase 342 501 - -
Mibi08g2167 632 Coils Coil 626 632 - -
Mibi08g2167 632 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 508 612 IPR015896 GO:0008883|GO:0033014|GO:0050661
Mibi08g2167 632 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 187 337 IPR015895 GO:0008883|GO:0033014|GO:0050661
Mibi08g2167 632 ProSitePatterns Glutamyl-tRNA reductase signature. 280 303 IPR018214 GO:0008883
Mibi08g2167 632 CDD NAD_bind_Glutamyl_tRNA_reduct 184 506 - -
Mibi08g2167 632 FunFam Glutamyl-tRNA reductase 183 342 - -
Mibi08g2167 632 Pfam Shikimate / quinate 5-dehydrogenase 352 494 IPR006151 -
Mibi08g2167 632 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 183 339 IPR036343 GO:0008883|GO:0033014|GO:0050661
Mibi08g2167 632 TIGRFAM hemA: glutamyl-tRNA reductase 184 592 IPR000343 GO:0008883|GO:0033014|GO:0050661
Mibi08g2167 632 Gene3D - 182 342 IPR036343 GO:0008883|GO:0033014|GO:0050661
Mibi08g2167 632 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 94 629 - -
Mibi08g2167 632 Coils Coil 395 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2167 Mibi-ChrMibi08 39182216 39187885 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2167 08 39182216 39187885 Mibi08g2167 08 39182216 39187885 ECH