Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1936 ATGGCTTCCCACAAGCTATTTGCAATAATCTTCGTCCTCTCTCTCCTAGCTCACTCAACATTCATCAATGCCCACAACAAACCCAAACCCTGCCCGCCGCCGGTGACACCACCAACCCCGAAACCGACCCCACCGACACCGAAACCGACCCCACCGACTCCGAAACCGACCCCACCGACACCAAAACCGACTCCTCCGACCCCGAAGCCGTGCCCTACACCTCCGACGCCGGCGCCAGAAAAATGTCCGAAGGATACCCTGAAGCTGTCTTTGTGTGCGGATGTGTTGGGATTGGTTAACGTTGTTGTGGGGCCCCCATTGTCGGAAAAATGTTGTGCATTGTTGGATGGATTGGTGGATTTGGAGGCAGCGCTTTGTTTGTGCACAGCTATTAAGGCCAACGTTCTTGGAATCAACTTGAATGTTCCCATCGCTCTCAGCTTAATCCTAAGTGCTTGTCAAAAAACTGTTCCTCCTGGTTTCCAATGTCCTTAG 495 0.5273 MASHKLFAIIFVLSLLAHSTFINAHNKPKPCPPPVTPPTPKPTPPTPKPTPPTPKPTPPTPKPTPPTPKPCPTPPTPAPEKCPKDTLKLSLCADVLGLVNVVVGPPLSEKCCALLDGLVDLEAALCLCTAIKANVLGINLNVPIALSLILSACQKTVPPGFQCP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1936 164 MobiDBLite consensus disorder prediction 27 82 - -
Mibi08g1936 164 SMART aai_6 82 163 IPR016140 -
Mibi08g1936 164 PANTHER - 7 163 - -
Mibi08g1936 164 Pfam Hydrophobic seed protein 82 164 IPR027923 -
Mibi08g1936 164 MobiDBLite consensus disorder prediction 27 81 - -
Mibi08g1936 164 PRINTS Proline rich extensin signature 62 79 - -
Mibi08g1936 164 PRINTS Proline rich extensin signature 45 61 - -
Mibi08g1936 164 PRINTS Proline rich extensin signature 21 42 - -
Mibi08g1936 164 CDD HPS_like 79 163 IPR027923 -
Mibi08g1936 164 Gene3D - 81 164 IPR036312 -
Mibi08g1936 164 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 85 164 IPR036312 -
Mibi08g1936 164 FunFam pEARLI1-like lipid transfer protein 1 80 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1936 Mibi-ChrMibi08 36320001 36320495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1936 75 164 Acyl Lipid Metabolism Gene Families AT4G22490 40.217 4.38e-17 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1936 08 36320001 36320495 Mibi05g0739 05 6963168 6963971 CCT
Mibi08g1936 08 36320001 36320495 Mibi08g1936 08 36320001 36320495 ECH