Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1665 ATGAGGGAGGACGAGAAGCAGAAGGTCAAACATATTCCAGAGTCCAGAGAGCTTGCATCGAGCTTTGCAGCTGTCGGCAAGCCCTTCAGTGTGGAGGATTTCTATATGGTTAGCTTCTCCTAACCTTCCTTCTTTCTCTCTCTGTGGACAACCATGGCTTTCCCTCAGCACCACCTCCAACAACACTACCAAACCCAACCACTACAACCACAATCAAAATCATTCAGGGCTTTACAAACAGTAGATGGTCAGATGTCGCAGCCTGCTGCCTTCTATAATCCAGATGATTTGCAAGATCAGGCCCAGCATCCTCCCTATGTTCCTCCTTTTCACGTTGTTGGATTTGCGCCTGGTCCATTTCCTCCTGCTGACGGCAGTGATGGTGGAGCTGATTTGCAATGGAATTATGGATTAGAACCCGAGAGGAAAAGGCTTAAAGAACAGGATTTTCTGGAGAACAATTCTCAGATATCTTCCATAGACTTCCTCCAAACTCGATCGGTCTCAACTGGATTGGGTTTGTCACTTGACAATACCCGCATGGCTTCTACTGGAGACTCAGCTTTGCTATCACTCATTGGTGATGACGTTGAGCGTGAATTACAGCAGCAGGACGCAGAAATACAAAAATATCTCAGAGTGCAGGGTGAAAGATTGCGGCAAACAATCATGGAGAAGGTTCAAGAAACTCAACTTCAGAGTATATCACTTATTGAAGACAAAGTCCTGCAAAAACTCAACGAGAAAGAAGCAGAGGTTGAAAGCATCAATAAGAAGAACATGGAGCTTGAAGAGAGAATGGAGCAGTTGTCAGTTGAAGCAAGTGCTTGGCAACAACGTGCCAGATACAATGAGAACATGATTGCTGCTCTCAAGTACAATCTTCAGCAAGTTTATGCTCAAGGCAGAGATAGCAAAGAAGGATGTGGCGACAGCGAGGTAGATGACACTGCTTCATGCTGCAATGGCCGCTCCATTGATTTTCATTTGCTCTCCAAGGATAACAGTGATATGAAGGAGATGATGACTTGTAAGGTATGCAGAGTGAATGAAGTTAGCATGCTTTTATTACCATGTAAACACCTCTGCCTTTGTAAAGATTGTGAGATTAAGCTTAGTTTCTGCCCCTTATGTCAATCTTCAAAATTTATTGGCATGGAAGTCTATATGTAA 1173 0.4399 MREDEKQKVKHIPESRELASSFAAVGKPFSVEDFYMVSFSXPSFFLSLWTTMAFPQHHLQQHYQTQPLQPQSKSFRALQTVDGQMSQPAAFYNPDDLQDQAQHPPYVPPFHVVGFAPGPFPPADGSDGGADLQWNYGLEPERKRLKEQDFLENNSQISSIDFLQTRSVSTGLGLSLDNTRMASTGDSALLSLIGDDVERELQQQDAEIQKYLRVQGERLRQTIMEKVQETQLQSISLIEDKVLQKLNEKEAEVESINKKNMELEERMEQLSVEASAWQQRARYNENMIAALKYNLQQVYAQGRDSKEGCGDSEVDDTASCCNGRSIDFHLLSKDNSDMKEMMTCKVCRVNEVSMLLLPCKHLCLCKDCEIKLSFCPLCQSSKFIGMEVYM 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1665 390 Gene3D - 197 217 - -
Mibi08g1665 390 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 325 390 - -
Mibi08g1665 390 Pfam Zinc finger, C3HC4 type (RING finger) 342 380 - -
Mibi08g1665 390 PIRSF SBP1_RNase_bind 64 390 IPR017066 -
Mibi08g1665 390 Gene3D Death Domain, Fas 218 352 IPR011029 -
Mibi08g1665 390 Coils Coil 239 280 - -
Mibi08g1665 390 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 142 388 IPR017066 -
Mibi08g1665 390 Gene3D - 353 380 - -
Mibi08g1665 390 ProSiteProfiles Zinc finger RING-type profile. 344 379 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1665 Mibi-ChrMibi08 33248929 33253714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1665 332 380 Miscellaneous Gene Families AT4G39050 42.857 2.49e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1665 08 33248929 33253714 Mibi08g1665 08 33248929 33253714 ECH