Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1648 ATGAAATCTCTCACTCTACTCTGTTTTCTCTCCCTCTGCATTTCACTTCTCCCTTCCTTTTCCTTCTCTTCCATATTATTTCAGGGCTTCAATTGGGTATCCTATGGAAAAGCAGGGGGATATTACAATTACCTCAAGACTCAGGTGCCATTGGTTGCAGATCTTGGAGTTAATTACGTTTGGCTCCCTCCTCCTTCTCAATCTGCTTCTTCTGAAGGATACCTTCCGGGAAGGCTGTACGATCTAGATGCATCAAAATACGGTTCAAAGGAAGAATTGAAGTCACTGATCGCAGCTTTCCACGAAAAGGGAATCAAATGCTTGGCTGACATAGTCATCAACCACAGAACCGCAGAGAAACAGGACGGAAGAGGAATCTACTGCATCTTCGAAGGTGGGACCCCTGATTCACGTCTCGACTGGGGTCCCTCTTTCATATGCAGCGACGACACCACCTATTCTGATGGCACCGGAAATCCCGACAGTGGAGACCCATTCAAGGGGGCGCCGGACATAGACCATCTCAATCCTCAAGTTCAATCTGAGCTGTCCGATTGGATGAACTGGTTGAAGACAGAAATTGGGTTTGATGGTTGGCGTTTCGATTTCGTAAAAGGTTATGCCCCAAGTATCACCAACATTTACATGCAACGAACCACACCAGATTTCGCGGTTGGGGAAAAATGGGACAATATGTCTCAGGGGCAGGATGGGAAACCTGAGAATAATCAAGACGCTCATCGTGGTGCCTTGGTGAATTGGGTGGAGGAGGCTGGCGGCGCCGTCACGGCCTTTGATTTCACGACCAAAGGGATTCTTCAGGCCGCCGTACAAGGCGAGCTATGGCGGTTGAAGGATTCCAACGGTAAGCCGCCAGGAATGATTGGAACAAAGCCAGAAAATGCGGTGACATTCATTGATAACCATGACACAGGTTCCACTCAGAAACTGTGGCCATTCCCTTCAGACAAAGTCGTGCAGGGATATGCTTATATTCTAACTCATCCTGCAATACCATCAATATTCTATGATCACGTGATGGAATGGGGGCTAAAGGAGGAGATAGAGAAATTGAGTGATATAAGGAGGAGGAATGGGATAAATGAGAGAAGCAGTGTGAAGATATTGGCAGCAGAAGGAGACGTGTACATGGCGGAGGTAGATAACAAAGTGATAATGAAGATTGGGCCTAAGATGGATCTTGCAGGCCTTCTTCCTTCTAATGTCATCATACCTGCCGCTACTTCTGGCCAAGACTATGCTGTGTGGGAGACCACCAATTGA 1284 0.4727 MKSLTLLCFLSLCISLLPSFSFSSILFQGFNWVSYGKAGGYYNYLKTQVPLVADLGVNYVWLPPPSQSASSEGYLPGRLYDLDASKYGSKEELKSLIAAFHEKGIKCLADIVINHRTAEKQDGRGIYCIFEGGTPDSRLDWGPSFICSDDTTYSDGTGNPDSGDPFKGAPDIDHLNPQVQSELSDWMNWLKTEIGFDGWRFDFVKGYAPSITNIYMQRTTPDFAVGEKWDNMSQGQDGKPENNQDAHRGALVNWVEEAGGAVTAFDFTTKGILQAAVQGELWRLKDSNGKPPGMIGTKPENAVTFIDNHDTGSTQKLWPFPSDKVVQGYAYILTHPAIPSIFYDHVMEWGLKEEIEKLSDIRRRNGINERSSVKILAAEGDVYMAEVDNKVIMKIGPKMDLAGLLPSNVIIPAATSGQDYAVWETTN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1648 427 Pfam Alpha-amylase C-terminal beta-sheet domain 364 424 IPR012850 GO:0004556|GO:0005509|GO:0005975
Mibi08g1648 427 SUPERFAMILY Glycosyl hydrolase domain 367 424 - -
Mibi08g1648 427 PIRSF Alpha-amylase_plant 1 426 IPR013775 GO:0004556|GO:0005509|GO:0005975
Mibi08g1648 427 MobiDBLite consensus disorder prediction 152 174 - -
Mibi08g1648 427 CDD AmyAc_arch_bac_plant_AmyA 25 373 - -
Mibi08g1648 427 SMART alpha-amyl_c2 363 425 IPR012850 GO:0004556|GO:0005509|GO:0005975
Mibi08g1648 427 PANTHER ALPHA-AMYLASE 26 426 - -
Mibi08g1648 427 SMART aamy 24 370 IPR006047 GO:0005975
Mibi08g1648 427 Gene3D - 367 425 IPR013780 -
Mibi08g1648 427 Pfam Alpha amylase, catalytic domain 52 220 IPR006047 GO:0005975
Mibi08g1648 427 PRINTS Alpha-amylase signature 300 312 IPR006046 GO:0004556|GO:0005975|GO:0043169
Mibi08g1648 427 PRINTS Alpha-amylase signature 104 115 IPR006046 GO:0004556|GO:0005975|GO:0043169
Mibi08g1648 427 PRINTS Alpha-amylase signature 196 207 IPR006046 GO:0004556|GO:0005975|GO:0043169
Mibi08g1648 427 SUPERFAMILY (Trans)glycosidases 26 362 IPR017853 -
Mibi08g1648 427 Gene3D Glycosidases 24 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1648 Mibi-ChrMibi08 33004630 33006608 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1648 1 424 Glycoside Hydrolase AT4G25000 64.637 0.0 557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1648 08 33004630 33006608 Mibi08g1648 08 33004630 33006608 ECH