Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1388 ATGGCGGATCAGTTAGCAAGGGGTGGGGAATTTGAGGCGAAAGCAGAGAAAAAGCTTAATGGGTGGGGATTGTTCGGCTCCAAATATGAGGACGCTGCTGATCTCTTCGAAAAAGCCGCCAATTCCTACAAGCTTGCTAAAGCATGGGATAAAGCTGGCTCAACTTACATCAAGTTGGCAAATTGTTACTTCAAGGTGGAAAGCAAGCATGAAGCAGGTCAAGCTTATGTTGATGCTGCTCATTGCTATAAAAAGGAAAATATAAATGAGGCTGTATCTTGCTTGGACAAAGCAGTGAACATTTTCTGTGAAATTGGAAGACTCAATATGGCTGCTAGATATTTTAAGGAAATTGCTGAGTTGCATGAGTCTGAACAGAACATTGAGCAGGCTATTGTTTACTATGAAAAAGCAGCTGATTTTTTTGCAAATGAAGAGGTGACAACTTCTGCTAACCAGTGCAAGCAGAAAGTTGCCCAGTTTGCTGCTCAGCTTGAACAATATCAGAAGGCAGTAGAGATTTACGAAGAAATAGCCCGCCAGTCTCTGAACAATACTTTGTTGAAGTATGGAGTCAAAGGGCATCTTCTTAATGCTGGCATTTGCCAACTGTGTAAAGGGGATGTTGTTGCTATCAACAATGCACTAGAGCGATATCAGGAATTGGATCCAACATTTTCAGGAACACGGGAATTTAAACTTTTGGTGGAAATTGCTGATTCAATTGAGAATGAAGATGTTGGGAAGTTTACTGATGTTGTCAAGGAATTTGACAGCATGACCCCTCTGGATTCGTGGAAGACAACTCTACTTTTGAGAGTGAAGGAAAAGCTGAAATCTAAAGAACTTGAGGAGGACGATCTCACCTAA 870 0.4138 MADQLARGGEFEAKAEKKLNGWGLFGSKYEDAADLFEKAANSYKLAKAWDKAGSTYIKLANCYFKVESKHEAGQAYVDAAHCYKKENINEAVSCLDKAVNIFCEIGRLNMAARYFKEIAELHESEQNIEQAIVYYEKAADFFANEEVTTSANQCKQKVAQFAAQLEQYQKAVEIYEEIARQSLNNTLLKYGVKGHLLNAGICQLCKGDVVAINNALERYQELDPTFSGTREFKLLVEIADSIENEDVGKFTDVVKEFDSMTPLDSWKTTLLLRVKEKLKSKELEEDDLT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1388 289 FunFam Alpha-soluble NSF attachment protein-like 6 285 - -
Mibi08g1388 289 Pfam Soluble NSF attachment protein, SNAP 8 278 - -
Mibi08g1388 289 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 9 279 IPR000744 GO:0006886
Mibi08g1388 289 SUPERFAMILY TPR-like 10 281 IPR011990 GO:0005515
Mibi08g1388 289 Coils Coil 151 185 - -
Mibi08g1388 289 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Mibi08g1388 289 PRINTS NSF attachment protein signature 183 202 IPR000744 GO:0006886
Mibi08g1388 289 PRINTS NSF attachment protein signature 119 136 IPR000744 GO:0006886
Mibi08g1388 289 PRINTS NSF attachment protein signature 224 244 IPR000744 GO:0006886
Mibi08g1388 289 PRINTS NSF attachment protein signature 255 275 IPR000744 GO:0006886
Mibi08g1388 289 PRINTS NSF attachment protein signature 152 175 IPR000744 GO:0006886
Mibi08g1388 289 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
Mibi08g1388 289 CDD SNAP 10 278 IPR000744 GO:0006886
Mibi08g1388 289 Gene3D Tetratricopeptide repeat domain 8 288 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1388 Mibi-ChrMibi08 29956373 29961331 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1388 08 29956373 29961331 Mibi08g1388 08 29956373 29961331 CCT
Mibi08g1388 08 29956373 29961331 Mibi08g1388 08 29956373 29961331 ECH