Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1373 ATGGAGTCTGGCTCATCCTTTTTCTTAGTCTTTCTGGTTCTTATAGCTTCTGCATTGTCTTCTGCAAATGCCAGAGTTCATGAGCACCAGTTTGTTGTTCAAGCCACTAAAGTGAAGAGGCTATGCAAAACTCATAACACCATCACAGTGAACGGTCAATTTCCTGGCCCAACTCTGGAAGTCAATAACGGAGACACTTTGGTCGTCAAAGTCACCAACAAAGCTCGTTACAACGTCACCATTCACTGGCATGGAGTTAGACAAATGAGAACTGGGTGGGCAGATGGGCCAGAATTTGTGACACAGTGTCCTATTCGTCCTGGAGGAAGTTACACTTACCGTTTCACAATTCAAGGACAAGAAGGAACACTTTGGTGGCATGCTCATAGCTCATGGCTTAGAGCCACTGTTTATGGAGCTCTCATCATTCGTCCCAGGGAAGGAGAACCTTACCCTTTCCCTAAACCAAAGCGAGAGACACCCCTTCTTCTCGGGGAATGGTGGGACACAAACCCCATTGATGTTGTGAGGGAGGCCACTCGTACAGGAGCTGCTCCTAATGTATCTGATGCTTACACCATTAACGGTCAACCCGGCGATCTTTACAAGTGCTCCTCCCAAGGCACAACCGTTGTTCCAATAGAAGCTGGTGAGACCAATCTCCTCAGAGTAATCAACGCTGCACTCAATCAACCACTTTTCTTCACCGTCGCCAACCACAAACTCACGGTGGTGGGCGCCGACGCCTCCTACCTAAAACCCTTCACAACCAATGTTCTCATGTTAGGACCTGGTCAAACCACCGACGTCCTCATCAACGGCGACCAACCACCCTCCCTGTACTACATGGCGGCGCGTGCTTACCAATCCGCCCAAAACGCACCGTTTGACAACACAACCACCACAGCCATCCTCCAATACAAATCATCAAAACAACACTCCACCAAAATGAAACCATTGATGCCTCCACTTCCAGCATACAACGACACCAACACTGTCACTGCCTTCAGCCAAAAATTCCGAAGCCCAAGAAAAGCTGACGTGCCCATCGAAATTGACGATAGCCTTTTTTTCACTGTGGGCCTTGGGCTTAACAAATGCCCGCCCAATTTCAGAAAGAGAAGGTGCCAAGGGCCCAATGGGACGCGATTCACTGCGAGCATGAACAATGTCTCTTTCGTGCTCCCCAGGAATGTCTCCATCCTTCAAGCTCATCAGCTCGGAGTTCCCTGCGTTTTCACCACCGATTTTCCGGCGAGTCCTCCGGTGAAGTTTGATTACACTGGAAATGTCAGTCGATCGCTGTGGCAACCTGTTCCAGGGACGAAGGTGTATAAGCTAAAGTATGGATCTAGGGTTCAGGTTGTTATTCAGGATACGAGTATTGTGACCCCTGAAGATCACCCCATTCATCTTCATGGATATGATTTCTATATTGTAGCTGAAGGATTTGGGAATTTTAACCCTAAGAAAGATACCGCGAAATTTAACCTTGTTGATCCTCCTATGAGGAACACCGTCGCTGTTCCTTCTAATGGATGGGCTGTGATCCGATTCGTTGCTGATAATCCAGGTGCTTGGATTATGCATTGCCATTTGGATGTTCATATAAACTGGGGTTTGGCTATGGTGTTCTTGGTGGAGAATGGAGTTGGGAAATTGCAATCCTTGGAGCCTCCTCCAGCGGATCTTCCTCTCTGTTAG 1704 0.4812 MESGSSFFLVFLVLIASALSSANARVHEHQFVVQATKVKRLCKTHNTITVNGQFPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIRPREGEPYPFPKPKRETPLLLGEWWDTNPIDVVREATRTGAAPNVSDAYTINGQPGDLYKCSSQGTTVVPIEAGETNLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTNVLMLGPGQTTDVLINGDQPPSLYYMAARAYQSAQNAPFDNTTTTAILQYKSSKQHSTKMKPLMPPLPAYNDTNTVTAFSQKFRSPRKADVPIEIDDSLFFTVGLGLNKCPPNFRKRRCQGPNGTRFTASMNNVSFVLPRNVSILQAHQLGVPCVFTTDFPASPPVKFDYTGNVSRSLWQPVPGTKVYKLKYGSRVQVVIQDTSIVTPEDHPIHLHGYDFYIVAEGFGNFNPKKDTAKFNLVDPPMRNTVAVPSNGWAVIRFVADNPGAWIMHCHLDVHINWGLAMVFLVENGVGKLQSLEPPPADLPLC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1373 567 SUPERFAMILY Cupredoxins 153 343 IPR008972 -
Mibi08g1373 567 CDD CuRO_3_LCC_plant 412 550 IPR034289 GO:0005507
Mibi08g1373 567 FunFam Laccase 15 145 - -
Mibi08g1373 567 Gene3D - 372 567 IPR008972 -
Mibi08g1373 567 FunFam Laccase 157 346 - -
Mibi08g1373 567 SUPERFAMILY Cupredoxins 22 172 IPR008972 -
Mibi08g1373 567 Gene3D - 14 145 IPR008972 -
Mibi08g1373 567 SUPERFAMILY Cupredoxins 378 567 IPR008972 -
Mibi08g1373 567 ProSitePatterns Multicopper oxidases signature 2. 530 541 IPR002355 GO:0005507
Mibi08g1373 567 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
Mibi08g1373 567 ProSitePatterns Multicopper oxidases signature 1. 525 545 IPR033138 -
Mibi08g1373 567 Gene3D - 157 345 IPR008972 -
Mibi08g1373 567 Pfam Multicopper oxidase 33 147 IPR011707 GO:0005507
Mibi08g1373 567 Pfam Multicopper oxidase 159 309 IPR001117 -
Mibi08g1373 567 Pfam Multicopper oxidase 417 549 IPR011706 GO:0005507|GO:0016491
Mibi08g1373 567 PANTHER MULTI-COPPER OXIDASE 31 552 IPR045087 -
Mibi08g1373 567 CDD CuRO_2_LCC_plant 161 307 IPR034285 -
Mibi08g1373 567 TIGRFAM laccase: laccase 24 567 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1373 Mibi-ChrMibi08 29795192 29797757 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1373 08 29795192 29797757 Mibi08g1373 08 29795192 29797757 CCT