Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi08g1358 | ATGGCAAACTCAGAAGAACAAAATCATCTCCCATTTCCTCCGATCCCTACAAATAGCCTCAATACGCTTAACTTCCCCAATGACGACGACGATGAAGAAGAAGAAGATGACTCTGAGGAAGTCGATGATGATGGTGAACCCATGAACGAACAGGATCTTCCTGCTCGAGTCCATGATGTGCTTATAAGGGGGAATACCAAAACCAAGGATTGGGTGATTGAGGCCGAGGTGGAAGAGATCAAGAACGCCACAACTATGCTTGAGCTAGTAGAAGCCGCCAGAATTGCCAATGCCAAGCTTCACGGCCTCCAGATTTTTGATGCGGTTAATATTAAGCTTGAGCCTGGACCTCCAGAGTTGGCAGGTACTGCCAATGTCATCATTGAGGTCTCTGAGACAGATACCAAACCTTCTGGTGAAGTCGGTGTTTATTCAAAACCCTCGGCTGGTTCTTGGTCTCTTGAAAGTGCTCTAAAGTTCAAAAACTTGTTTGGCTATGGTGATTTATGGGATGGTTCTCTTGCATATGGTCCCAATCAAACTTCAGAGGTGAGTGTTGGGGTGTTTGTTCCTCGATTGAAAGGATTATTAACCCCTGTTGTGGCACGAGCATTCATGCATTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCGATCAACTGGCATGTCTCTTGGCTTCTTCTCAACAAAGCACCATGACTTTGTATATAATCTTGGATGGCGTACCATAACAGATCCATCACAAATGTCATCCAGATCTATTAGGAGGCAGATTGGACATGGTTTATTGTCATCTTTGAAATATACATTTAAGATTGACCAGAGGAACTCGCCAGTTAGGCCTACAAAAGGTTATGCTTTTCTTTCTACAACTCAATTAGGTGGCCTTGCACCAGATCACAGGAGCTTGCGCTTTCTGCGTCAGGAGTTTGACGTTCGATATGCCATTCCTCTTGGGTTTTTTCATACTGCGCTCAACCTTGGGATCTCTGCTGGTGTCATTTTCCCATGGGGACATGGTTTCTTGGACAAGCCTTCTCCCCTGCCAGAAAGGTTTTTCTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTGGGAGGGCCAACAACATTATGGGGATTCAGGACAAGGGCATTAGGCCCTACTGAACCACGAAGACAAAGTAGAGATGGTAAAAATGATGACAATGTTGATTCCACTGGAAGGGACTTTGTTGGAGGAGATCTTGCTGTTACTGCTTTTGCAGACTTCTCCTTTGATCTTCCAGTTAGCTGGTTAAGAGAACGAGGAATCCATGGACATGTTTTTGCTGGTGCTGGGAATATTGCCAAGTTAACTGAGAATGAGTACAGGAAGTTCTCTCCTAAAAAATTTTTGGATTCATTTCGAACATCTGTGGGATGTGGAATTGTTGTTCCAACTAAAGTTATTCGCCTAGAGGGTAACTTCTACTACATACTCAGGCAGCATGAGCATGATCGTGGAAAGACTGGTTTTAGGTTTAGCTTCTCGGTTCCTTCATAG | 1527 | 0.444 | MANSEEQNHLPFPPIPTNSLNTLNFPNDDDDEEEEDDSEEVDDDGEPMNEQDLPARVHDVLIRGNTKTKDWVIEAEVEEIKNATTMLELVEAARIANAKLHGLQIFDAVNIKLEPGPPELAGTANVIIEVSETDTKPSGEVGVYSKPSAGSWSLESALKFKNLFGYGDLWDGSLAYGPNQTSEVSVGVFVPRLKGLLTPVVARAFMHSQDWQEFSSYKERSTGMSLGFFSTKHHDFVYNLGWRTITDPSQMSSRSIRRQIGHGLLSSLKYTFKIDQRNSPVRPTKGYAFLSTTQLGGLAPDHRSLRFLRQEFDVRYAIPLGFFHTALNLGISAGVIFPWGHGFLDKPSPLPERFFLGGDFSPVCTLGGPTTLWGFRTRALGPTEPRRQSRDGKNDDNVDSTGRDFVGGDLAVTAFADFSFDLPVSWLRERGIHGHVFAGAGNIAKLTENEYRKFSPKKFLDSFRTSVGCGIVVPTKVIRLEGNFYYILRQHEHDRGKTGFRFSFSVPS | 508 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1358 | 508 | Pfam | Omp85 superfamily domain | 162 | 505 | IPR000184 | GO:0019867 | |
| Mibi08g1358 | 508 | MobiDBLite | consensus disorder prediction | 376 | 400 | - | - | |
| Mibi08g1358 | 508 | MobiDBLite | consensus disorder prediction | 383 | 400 | - | - | |
| Mibi08g1358 | 508 | FunFam | Outer membrane OMP85 family protein | 54 | 133 | - | - | |
| Mibi08g1358 | 508 | PANTHER | SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER | 43 | 505 | IPR039910 | - | |
| Mibi08g1358 | 508 | FunFam | Outer membrane OMP85 family protein | 144 | 506 | - | - | |
| Mibi08g1358 | 508 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
| Mibi08g1358 | 508 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Mibi08g1358 | 508 | Coils | Coil | 73 | 93 | - | - | |
| Mibi08g1358 | 508 | Gene3D | membrane protein fhac | 54 | 133 | - | - | |
| Mibi08g1358 | 508 | MobiDBLite | consensus disorder prediction | 26 | 48 | - | - | |
| Mibi08g1358 | 508 | Gene3D | membrane protein fhac: a member of the omp85/tpsb transporter family | 144 | 506 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi08g1358 | Mibi-ChrMibi08 | 29664482 | 29670191 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mibi08g1358 | 08 | 29664482 | 29670191 | Mibi08g1358 | 08 | 29664482 | 29670191 | CCT | |
| Mibi08g1358 | 08 | 29664482 | 29670191 | Mibi08g1358 | 08 | 29664482 | 29670191 | ECH |