Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1338 ATGTCGAAAGAGACTTACAGAGTTTGCTTTTGCTGTCGCCGGAGGTTTAGGCTCCGCGCCTCCGAGGCACCTTCGGAGATCAAGTCGATTTTTGATCGATACTCTGAGAATGGCTTTATGACTGCTTCTCACCTCCGGAATTTCTTGATTGAGGTTCAGAAAGAAGAGAAAGCCACCGAAGATGAAGCTCAGGCCATCATCGATGGCCTTAAGCATTTGAATATCTTTCATCGCAAGGGTCTCACCCTTGACGGTTTCTTCAAGTTCCTCTTCACTGACCAGAACCAACCTCTCTCTCCTTCTCTTGGGGTTCACCATGATATGACTGCACCGTTGTCTCATTATTTCATATTCACGGGTCACAATTCCTATCTCACTGGAAATCAGCTTAGTAGTGATTGCAGTGATGTCCCCGTCATACATGCCCTGCAAAGAGGTGTAAGAGTGATAGAACTGGACATATGGCCTAATGCTACAAAGGATGATGTGCATGTTCTTCATGGAAGGACGCTGACTACTCCTGTAGAGCTTATCAAATGTCTGAGGTCAATTAAGGAGCATGCCTTCTCTGCGTCTGAATATCCAGTTGTAATAACTCTTGAAGACCATCTTACTCCTGATCTGCAGGCTAAAGTGGCTGAGATGGTCACTCGAACATTTGGAGACATTCTATTTTCACCTGGTACGGAATGCTTGAAGGAATTTCCTTCTCCAGAATCACTTAAAAGGAGGATTATTATATCAACCAAACCGCCTAAGGAGTACCTTGAGGCTAAAGAAGTAAAAGAAAAGGGGGACGAGTCACTGAAGTCAAAGGCCTCAGGTGATGAGGAAGCTTGGGGAAAGGAAGTCCCAGGCTTGAAATGTGGCACTTTAGCCGATGACAAGAACCATGTCGATGAAGAAGTAATTGATGAGGAGGATCATGATGAAGCAGATAAGTCACACCATGGAGCACCTGAATACAGGCGTTTAATTGCCATTCATGCTGGCAAACCCAAAGGTGGAATAGACGAATGTCTGAAAGTGGATCCTGATAAAGTACGACGTCTAAGCTTAAGTGAGCAAGAGCTTGAGAAGATTTCTGTGACTCATGGAAAAGAGATTATCAGGTTTACTCAGCGGAATATCCTGAGGGTGTATCCAAAGGGTACACGCATTGACTCATCAAATTATAACCCACTAATTGGGTGGATGCATGGAGCTCAAATGGTTGCATTTAATATGCAGGGATATGGGAGATCACTTTGGGTGATGCAAGGAATGTTCAAAGCCAATGGTGGATGTGGTTATGTTAAAAAACCAGAATTCCTACTCAAGGCTTCCCCGAATAATGAGGTCTTTGATCCTAAGGCCAAGTTACCTGTTAAGACTACTTTGAAGGTGACCGTATACATGGGAGAAGGATGGTCTAATGATTTCAAGCCAACCCACTTTGATCAATACTCACCTCCGGACTTCTACACAAGAGTGGGTATAGCCGGAGTACCAGCCGATACTGTGATGAAGAGGACAAAAGCTATAGAGGACAATTGGTTTCCTACATGGAACGAGACATTCGAATTCCCTCTTACAGTTCCAGAACTGGCAGTGCTTCGCATAGAAGTTCATGAGTACGATATGTCGGAAAAAGATGACTTTGGTGGCCAAACGTGCCTTCCTGTTCCTGAGCTCAGAAATGGAATTCGAGCAGTTTCACTGCACAGCCGCAAGGGGGAAAAGTACAACTCTGTGAAGCTCCTTATGCGCTTTGAGTTTCTTGATCTCTAA 1770 0.4458 MSKETYRVCFCCRRRFRLRASEAPSEIKSIFDRYSENGFMTASHLRNFLIEVQKEEKATEDEAQAIIDGLKHLNIFHRKGLTLDGFFKFLFTDQNQPLSPSLGVHHDMTAPLSHYFIFTGHNSYLTGNQLSSDCSDVPVIHALQRGVRVIELDIWPNATKDDVHVLHGRTLTTPVELIKCLRSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTRTFGDILFSPGTECLKEFPSPESLKRRIIISTKPPKEYLEAKEVKEKGDESLKSKASGDEEAWGKEVPGLKCGTLADDKNHVDEEVIDEEDHDEADKSHHGAPEYRRLIAIHAGKPKGGIDECLKVDPDKVRRLSLSEQELEKISVTHGKEIIRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWVMQGMFKANGGCGYVKKPEFLLKASPNNEVFDPKAKLPVKTTLKVTVYMGEGWSNDFKPTHFDQYSPPDFYTRVGIAGVPADTVMKRTKAIEDNWFPTWNETFEFPLTVPELAVLRIEVHEYDMSEKDDFGGQTCLPVPELRNGIRAVSLHSRKGEKYNSVKLLMRFEFLDL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1338 589 MobiDBLite consensus disorder prediction 261 282 - -
Mibi08g1338 589 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 352 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mibi08g1338 589 FunFam Phosphoinositide phospholipase C 454 587 - -
Mibi08g1338 589 Gene3D C2 domain 454 589 IPR035892 -
Mibi08g1338 589 SMART C2_3c 459 567 IPR000008 -
Mibi08g1338 589 SUPERFAMILY EF-hand 17 107 IPR011992 -
Mibi08g1338 589 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 106 250 - -
Mibi08g1338 589 Pfam C2 domain 459 560 IPR000008 -
Mibi08g1338 589 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 452 IPR017946 GO:0006629|GO:0008081
Mibi08g1338 589 PRINTS Phospholipase C signature 377 398 IPR001192 GO:0035556
Mibi08g1338 589 PRINTS Phospholipase C signature 398 416 IPR001192 GO:0035556
Mibi08g1338 589 PRINTS Phospholipase C signature 137 157 IPR001192 GO:0035556
Mibi08g1338 589 PRINTS Phospholipase C signature 234 251 IPR001192 GO:0035556
Mibi08g1338 589 PRINTS Phospholipase C signature 553 563 IPR001192 GO:0035556
Mibi08g1338 589 PRINTS Phospholipase C signature 111 129 IPR001192 GO:0035556
Mibi08g1338 589 CDD C2_PLC_like 457 586 - -
Mibi08g1338 589 CDD PI-PLCc_plant 105 426 - -
Mibi08g1338 589 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 13 586 IPR001192 GO:0035556
Mibi08g1338 589 Pfam Phosphatidylinositol-specific phospholipase C, X domain 108 250 IPR000909 -
Mibi08g1338 589 SMART plcx_3 106 250 IPR000909 -
Mibi08g1338 589 SMART plcy_3 322 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mibi08g1338 589 Gene3D - 22 101 - -
Mibi08g1338 589 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 459 587 IPR035892 -
Mibi08g1338 589 SUPERFAMILY PLC-like phosphodiesterases 106 440 IPR017946 GO:0006629|GO:0008081
Mibi08g1338 589 Pfam Phosphoinositide-specific phospholipase C, efhand-like 25 94 IPR015359 -
Mibi08g1338 589 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 351 437 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mibi08g1338 589 ProSiteProfiles C2 domain profile. 439 569 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1338 Mibi-ChrMibi08 29373979 29378631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1338 1 587 Acyl Lipid Metabolism Gene Families AT3G55940 67.845 0.0 812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1338 08 29373979 29378631 Mibi08g1338 08 29373979 29378631 CCT
Mibi08g1338 08 29373979 29378631 Mibi08g1338 08 29373979 29378631 ECH