Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1337 ATGTCACTCACTACTAACAACGATTCCGCTTTAAAGGAAGAGGAAGGGGAGGAATTAGAAGAAGAAGACATGAAGACTTATAACAAGTACAAGTGGCTCTTGTTCTTCACCAGAAAGTTCAAGAGCAACGATCTTGTCCCACCTAAAGACCTTAAGGAGACCTTCTCCAAGTTCGCCGGCGGTGGATCCCACATGTCCGGCGACCAGTTCCGGCGGTTCCTGGTGGAGCACCAAGGCCACGTGGACATCACCGAATCAGAATCCGAGGAAATCGTGGACAAGATCCTTAAAGCTCGAAAGGACCATGCTCATGGACTCACTCTTGATGATGTCTTCCATTTTCTTCTTCTAGATGATTTCAATGGTCCTCTCAAATCTGAGGTTCATCATGATATGGAAGCTCCATTGTCACACTATTTCATATACACAGGGCACAATTCATATCTTACTGGGAATCAATTGAGCAGTGATTGTAGTGAAGAACCCATCATTAAGGCTCTTCAACGAGGAGTGAGGGTCATTGAACTTGATTTATGGCCTACTTCCAATAAAGATGACATTAAAGTTGTTCATGGATGGACTCTTACCAATCCTGTTTCACCCAAAAAATGTCTGGAGGCCATAAAGAAGCATGCTTTTGTTAAATCTGAGTACCCTGTTATTATAACTATTGAGGACCACCTGACAAGAGGTCTTCGGCATAAATTTGCAGAGATGGCTACTCAAATACTAGGAGACTTGCTATATTATCATCAGGGAGGACGTTTGACAGAATTCCCATCACCAACATCATTGAAAAATAAAATAATTATGTCCGCCAAACCTCCAAAAGAATATCTTAGTAAAAGCATTGAGGACAGAGGTAATAATAACAACGATGTGCAAGATGGAAGTGAATCATCTGAAGAAGAAACGTCATGGGGGCAAGAGTCTCCTGATTCTATGGCTGAACCAGAAACTGAGGACATAGTGGCCGAACCAGAAACTGAGAACAAGAATGGAAGTGACAAAGAAGAGGGAGATTCAAATGCAGGTGATCAAAATAGGTCAGATCAACAGTATTCAGCTGATTATAAACGCTTAATCGCAATCCATGCGAAGAAAATAAAGGGTAGCCTAAAGGATAAATTGAGGATTGAAGAGGAAGTTAGGCGCCTAAGTTGGAATGAGCAGACACTTGAAAGGGCTTCTGAATCTCATGGAACTGATATTATAAGATTCACCCAGAGAAACATCCTCAGGGTATACCCTAGAGGAACACGTGTCCAATCTTCAAATTTCAAGCCACATATTGGGTGGATGTATGGAGCTCAAATGGTGGCATTCAATATGCAGAAGCATGGGAAGCAGCAGTGGTTGATGCAGGGAATGTTCAGGGCAAATGGAGGGTGTGGTTATGTGAAGAAACCTGATATAGTAATGCAGAATCTTCCAAATGAAGAACTGTTTGATCCTAAAGGAACATTACCAGAGAAAAAGACAATATTAAAGGTAAATGTGTACATGGGACATGGTTGGAGCTCTGATTTTAGTCCCACCCACTTTGACACGTTCTCTCCACCAGACTTTTACACAAAGGTCAGTATTGTTGGAGTGCCAGTTGATTGTGCCAAGAAGAGAACAAGGGTAATTATGGACAATTGGTTTCCTGTTTGGGAAGAGGAATTCAAATTCCCTTTAACCGTCCCAGAACTCGCATTGCTTCGGATAATAGTGAGGGAGAAAGACCAGGGAAAGGAGGATGACTTTGGTGGGCAGACATGTTTGCCAGTTTCAGAGCTAGGAGTTGGATTTCGGTCAGTCCCTTTGTATAACAAAAAGGGAGAGAAATATAAGTCTGTAAAGCTTTTCATGCAGTTTCAGTTCCTTGACCCCCAAAAAAGCAGTCTCAGTTGA 1896 0.4225 MSLTTNNDSALKEEEGEELEEEDMKTYNKYKWLLFFTRKFKSNDLVPPKDLKETFSKFAGGGSHMSGDQFRRFLVEHQGHVDITESESEEIVDKILKARKDHAHGLTLDDVFHFLLLDDFNGPLKSEVHHDMEAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALQRGVRVIELDLWPTSNKDDIKVVHGWTLTNPVSPKKCLEAIKKHAFVKSEYPVIITIEDHLTRGLRHKFAEMATQILGDLLYYHQGGRLTEFPSPTSLKNKIIMSAKPPKEYLSKSIEDRGNNNNDVQDGSESSEEETSWGQESPDSMAEPETEDIVAEPETENKNGSDKEEGDSNAGDQNRSDQQYSADYKRLIAIHAKKIKGSLKDKLRIEEEVRRLSWNEQTLERASESHGTDIIRFTQRNILRVYPRGTRVQSSNFKPHIGWMYGAQMVAFNMQKHGKQQWLMQGMFRANGGCGYVKKPDIVMQNLPNEELFDPKGTLPEKKTILKVNVYMGHGWSSDFSPTHFDTFSPPDFYTKVSIVGVPVDCAKKRTRVIMDNWFPVWEEEFKFPLTVPELALLRIIVREKDQGKEDDFGGQTCLPVSELGVGFRSVPLYNKKGEKYKSVKLFMQFQFLDPQKSSLS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1337 631 CDD C2_PLC_like 493 622 - -
Mibi08g1337 631 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 387 473 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mibi08g1337 631 Gene3D - 43 122 - -
Mibi08g1337 631 SMART C2_3c 495 603 IPR000008 -
Mibi08g1337 631 SMART plcx_3 130 274 IPR000909 -
Mibi08g1337 631 MobiDBLite consensus disorder prediction 282 352 - -
Mibi08g1337 631 MobiDBLite consensus disorder prediction 1 20 - -
Mibi08g1337 631 MobiDBLite consensus disorder prediction 325 345 - -
Mibi08g1337 631 Pfam Phosphatidylinositol-specific phospholipase C, X domain 132 274 IPR000909 -
Mibi08g1337 631 Gene3D Phosphatidylinositol (PI) phosphodiesterase 126 486 IPR017946 GO:0006629|GO:0008081
Mibi08g1337 631 SUPERFAMILY EF-hand 47 132 IPR011992 -
Mibi08g1337 631 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 20 622 IPR001192 GO:0035556
Mibi08g1337 631 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 130 274 - -
Mibi08g1337 631 MobiDBLite consensus disorder prediction 285 313 - -
Mibi08g1337 631 SUPERFAMILY PLC-like phosphodiesterases 130 475 IPR017946 GO:0006629|GO:0008081
Mibi08g1337 631 ProSiteProfiles C2 domain profile. 477 605 IPR000008 -
Mibi08g1337 631 PRINTS Phospholipase C signature 135 153 IPR001192 GO:0035556
Mibi08g1337 631 PRINTS Phospholipase C signature 589 599 IPR001192 GO:0035556
Mibi08g1337 631 PRINTS Phospholipase C signature 161 181 IPR001192 GO:0035556
Mibi08g1337 631 PRINTS Phospholipase C signature 258 275 IPR001192 GO:0035556
Mibi08g1337 631 PRINTS Phospholipase C signature 433 451 IPR001192 GO:0035556
Mibi08g1337 631 PRINTS Phospholipase C signature 412 433 IPR001192 GO:0035556
Mibi08g1337 631 Pfam C2 domain 496 594 IPR000008 -
Mibi08g1337 631 Gene3D C2 domain 491 630 IPR035892 -
Mibi08g1337 631 SMART plcy_3 358 474 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mibi08g1337 631 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 495 623 IPR035892 -
Mibi08g1337 631 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 380 471 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mibi08g1337 631 FunFam Phosphoinositide phospholipase C 490 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1337 Mibi-ChrMibi08 29364575 29368055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1337 11 622 Acyl Lipid Metabolism Gene Families AT2G40116 54.259 0.0 658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1337 08 29364575 29368055 Mibi08g1337 08 29364575 29368055 CCT
Mibi08g1337 08 29364575 29368055 Mibi08g1337 08 29364575 29368055 ECH