Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1246 ATGATTAACCTAATAGCGTTGCTCATTGTGCAACTGACGACAGATACATCTGTCTCCTTTTCGTCATTATTGGTGACAGCTATAGATGTCTGTGCTTCTATGAGATCTTGTCATGGATGTTCTTTGACAAGGAGGGGCGGCTTCACATTGCGGTCACTAGTTTGTCTTCTCTTGCCTCTCTTTCGCACTCGCTTTCGACCTCTTTCGTATCCGCCGTTTGACATGGACGCCGTAGATCCTTCTCGAGCTTTTGTCAAGGACGTTAAGCGCATTATCATCAAGGTTGGGACTGCTGTTGTGACCCGTAAAGATGGAAGATTAGCAGTTGGAAAATTGGGGACGCTTTGTGAGCAGATTAAGGATCTTAACACTCTAGGATATGAGGTTATTTTGGTGTCATCTGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGGTACAGGAAATTAGTTAACAGCAGCTTTGCTGATTTACAAAAGCCACAAGTTGAACTTGATGGCAAAGCATGCGCAGCAGTTGGACAAAACAGTCTAATGGCTATATATGATGCTTTGTTCACTCAGCTTGATGTGACATCGGCTCAGCTTCTTGTGACAGACAATGATTTTAGAGATAGAGATTTCAGAAAGCAACTTACTGAAACTGTAAAATCTTTGTTAGCACTAAAAGTCATACCCATATTCAATGAAAACGATGCAGTCAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGAATATTTTGGGACAATGACAGTTTATCAGCTTTATTGGCCTTGGAATTGAAAGCTGATCTTCTTGTTCTGTTGAGTGACGTGGATGGTCTTTATAGTGGCCCTCCGAGTGACCCACGCTCAAGGCTTATTCATACATACATAAAGGAAAAGCATCAGAATGAAATTACTTTTGGAGAAAAGTCTAGGGTGGGGAGAGGTGGGATGACTGCCAAGGTAAAGGCTGCTGTAAATGCAGCTGAAGCTGGCAGTCCTGTTATTATTACCAGTGGTTATGCACCGGAAAATATCCTTAAAATCCTTCAAGGACAATGTATTGGAACGCTCTTCCATAAAGATGCTCATAAGTGGGTCCCAGTAAAAGAGGTATCAGCGCGTGACATGGCAGTTGCAGCTAGGGACTGCTCCAGACGACTTCAGGCTTTATCTGAAGAAGAGAGGAAGCAAATTTTGCTAAATATAGCTGATGCACTGGAAGCAAATGAAAAAGAGATACGGATTGAAAATGAGGCTGATATTGCTGATGCACAACAAGCAAATCTTGATAAATCATTGGTTGCTAGGTTGCTTCTAAAGCCTGGAAAGATTGCAAGCCTTGCAAAGAACATGAGAACTCTGGCAAACATGGAAGATCCAATTGGTCGAGTATTAAAACGAACTGAGGTTGCAGATGGGCTAGTTCTAGAGAAAACATCATCTCCTTTAGGTGTTCTCTTGATTGTTTTTGAGTCCCGCCCTGATGCGCTAGTACAGATAGCTTCCTTGGCAATTCGAAGTGGGAATGGACTTCTCTTAAAAGGAGGCAAGGAGGCTAAGCGATCAAATGCAATTTTGCACAAGGTAATTACTGAAGCCATCCCAAAAACTGTTGGTGGAAAACTTATTGGACTTGTGACCTCAAGAGCGGAGATCCCTGAGCTGCTTAAGCTTGATGATGTAATTGATTTGGTTATTCCACGAGGCAGCAACAAACTTGTCTCTAGTATTAAAAGTTCAACTAAAATTCCTGTTCTGGGTCATGCTGATGGAATCTGCCACATCTATGTTGATAAGTCTGCTGATATGGAGATGGCTAGGCGGATTGTATTGGATGCGAAAATAGATTATCCAGCTGGTTGCAATGCCATGGAAACACTCCTTGTTCACAAGGGCATAGCAGAGAAAGGTTGGCTCAATGATGTTGTTGTTGACCTACGGGCTGAAGGTGTAACTTTATATGGAGGATCCAAGGCGAGCTCATTGTTGAATATACCAAAGGCACATTCATTTCATCATGAATACGGTTCATTGGCTTGCACTGTCGAAATTGTGGATGATGTGTATTCAGCTATTGATCATATTAATGTTCATGGAAGTGCACATACTGATTGTATAATTGCTGAAGACTGCAAAGTTGCTGAAGTGTTCCTACGCCAAGTGGACAGTGCTGCTGTTTTTCACAATGCTAGCACAAGATTTTGTGATGGGGCAAGATTTGGACTGGGTGCAGAGGTTGGAATAAGTACAAGCAGGATTCATGCTCGGGGTCCCGTCGGAGTTGAAGGATTGTTAACAACCAGATGGATACTTAGAGGAAGTGGACAAGTAGTTGATGGTGATAAAGGAGTTGTTTACACCCACAAAAACCTTACCACTTGA 2370 0.4266 MINLIALLIVQLTTDTSVSFSSLLVTAIDVCASMRSCHGCSLTRRGGFTLRSLVCLLLPLFRTRFRPLSYPPFDMDAVDPSRAFVKDVKRIIIKVGTAVVTRKDGRLAVGKLGTLCEQIKDLNTLGYEVILVSSGAVGLGRQRLRYRKLVNSSFADLQKPQVELDGKACAAVGQNSLMAIYDALFTQLDVTSAQLLVTDNDFRDRDFRKQLTETVKSLLALKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVDGLYSGPPSDPRSRLIHTYIKEKHQNEITFGEKSRVGRGGMTAKVKAAVNAAEAGSPVIITSGYAPENILKILQGQCIGTLFHKDAHKWVPVKEVSARDMAVAARDCSRRLQALSEEERKQILLNIADALEANEKEIRIENEADIADAQQANLDKSLVARLLLKPGKIASLAKNMRTLANMEDPIGRVLKRTEVADGLVLEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPKTVGGKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVSSIKSSTKIPVLGHADGICHIYVDKSADMEMARRIVLDAKIDYPAGCNAMETLLVHKGIAEKGWLNDVVVDLRAEGVTLYGGSKASSLLNIPKAHSFHHEYGSLACTVEIVDDVYSAIDHINVHGSAHTDCIIAEDCKVAEVFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGSGQVVDGDKGVVYTHKNLTT 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1246 789 SUPERFAMILY ALDH-like 370 773 IPR016161 GO:0016491
Mibi08g1246 789 TIGRFAM proB: glutamate 5-kinase 89 360 IPR005715 GO:0005737|GO:0006561
Mibi08g1246 789 PRINTS Glutamate 5-kinase family signature 126 140 IPR001057 GO:0005524|GO:0016301
Mibi08g1246 789 PRINTS Glutamate 5-kinase family signature 170 198 IPR001057 GO:0005524|GO:0016301
Mibi08g1246 789 PRINTS Glutamate 5-kinase family signature 249 276 IPR001057 GO:0005524|GO:0016301
Mibi08g1246 789 PRINTS Glutamate 5-kinase family signature 210 231 IPR001057 GO:0005524|GO:0016301
Mibi08g1246 789 PRINTS Glutamate 5-kinase family signature 308 328 IPR001057 GO:0005524|GO:0016301
Mibi08g1246 789 PIRSF P5C_synthetase 56 789 IPR005766 GO:0003824|GO:0006561
Mibi08g1246 789 ProSitePatterns Glutamate 5-kinase signature. 306 323 IPR019797 GO:0004349|GO:0006561
Mibi08g1246 789 Hamap Gamma-glutamyl phosphate reductase [proA]. 368 774 IPR000965 GO:0004350|GO:0006561
Mibi08g1246 789 FunFam Delta-1-pyrroline-5-carboxylate synthase 78 361 - -
Mibi08g1246 789 Gene3D - 79 362 IPR036393 -
Mibi08g1246 789 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 681 703 IPR020593 GO:0004350|GO:0006561
Mibi08g1246 789 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 82 787 IPR005766 GO:0003824|GO:0006561
Mibi08g1246 789 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 586 732 IPR016163 GO:0016620
Mibi08g1246 789 Hamap Glutamate 5-kinase [proB]. 89 358 IPR005715 GO:0005737|GO:0006561
Mibi08g1246 789 Pfam Amino acid kinase family 89 334 IPR001048 -
Mibi08g1246 789 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 378 772 IPR016162 GO:0016491
Mibi08g1246 789 SUPERFAMILY Carbamate kinase-like 89 354 IPR036393 -
Mibi08g1246 789 FunFam Delta-1-pyrroline-5-carboxylate synthase 586 732 - -
Mibi08g1246 789 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 76 788 - -
Mibi08g1246 789 Pfam Aldehyde dehydrogenase family 369 632 IPR015590 GO:0016491
Mibi08g1246 789 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 376 763 IPR000965 GO:0004350|GO:0006561
Mibi08g1246 789 CDD ALDH_F18-19_ProA-GPR 370 770 IPR000965 GO:0004350|GO:0006561
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1246 Mibi-ChrMibi08 28107635 28118103 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1246 08 28107635 28118103 Mibi08g1246 08 28107635 28118103 CCT
Mibi08g1246 08 28107635 28118103 Mibi08g1246 08 28107635 28118103 ECH