Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1228 ATGTTTGACTCTCTCCTCCCAGTTCTAGAATATTGGAGCTTTGAAGCAGAGCAGAGAGACGCACAGAATAAGACACTGTTTCAACGTAGCTTTTCGCTATCAGCTTTGAAGCAAAGCAGAGAGACACACAAAAGAAGACGGTGCTCCAAGCTCCTCAATATTCCAGGAGTTAGAATATTACATTGTTCCTTTCAGATGGCTCTTCTTAACAACATGGCTGCTGCTGGGGAAATTGGGGCTGCTGAATTCCTTCAGGGTTCATGTAGACAAAGTCTGTTTTTTGTGAAGAAATCTCATTGGCAGAAGAATAATTTGCTTTGGGGTACAGTTTGGAGGAGAAATCAAGTAAGGGGTTCCTCTAGAAGAGCCTTACCTTTGAGGTGCCATGCTCAAACAAATCCCCGTGTTGTGGTTTCTGGGGCTGTCAGTAGTTCAATAGATGATCAGTCTAGCTTAATTGAGAAGCCTGCCTTGGAAGTTATTCATTTTTACCGGGTTGCATTGATCCAAGAAAGTGCAACTACCGAACTTCTCAAGGAGATGAAAACTAAAATCTCTGATCGGATAGTGGCCTTGCAAACAGAGCAATGTTTCAATATTGGGATTGAAGCAAAACTTTCAAGTAATAAACTTTCAGTACTTAAATGGCTTCTTCAAGAAACATATGAACCTGAGGCATTGCAAACTGAGAGCTTTCTTGAGAAAAGAAGGAAGGAAGGTTTGAGTACTGTTATTATAGAGGTTGGCCCTAGGCTGTCATTTACCACAGCTTGGTCAGCTAATGCGATTGCAATTTGCCGTGCATGTGGATTGACAGAGGTGACACGTTTGGAGCGTTCGAGGAGGTACTTGTTATATACCCAGGGTGATTTAGAAGATTTTCAAATCAATGAATTTGCAGCAATGGTGCATGATAGGATGACCGAATGTATTTACATCCAGAAGCTAACATCTTTTGAGACTAGTGTAGTTCCAGAGGAAGTCTATTATATACCCATCATGGAGAAGGGGCAAAAGGCTTTAGAAGAAATTAATCAACAAATGGGTTTAGCTTTTGATGACCAAGATATTCAATACTATACTAAACTTTTTAGAGAGGATATTAAGCGTGATCCAACAAATGTTGAATTGTTTGATATTGCACAATCCAATAGTGAGCATAGCAGGCACTGGTTTTTTACAGGAAAGATGACCATTGATGGGCAACTGATGGATAAGACACTAATGCAGATTGTGAAAAGAACTTTACAAGCAAATCCAAATAACTCAGTTATTGGATTTAAGGATAACTCCAGTGCAATTAGGGGTTTCCCAGTGAAGCAGCTGCGACCAGTTTGGCCTGGGTCAACATGTCCATTAAACTTGGCATCATGTGATCTAGACATCTTGTTTACAGCTGAAACTCATAATTTTCCATGTGCAGTTGCTCCTTATCCTGGTGCAGAGACAGGTGCAGGAGGTCGCATTAGGGATACACATGCGACTGGAAGGGGTTCTTTTGTCCAGGCTGCTACAGCGGGTTATTGTGTTGGGAATCTCAACATGCCTGGGTCTTATGCTCAATGGGAAAATTCATCATTTACTTATCCTTCAAATCTAGCTTCACCTTTGCAGATCCTCCTGGATTCTAGTAATGGTGCATCTGACTATGGCAACAAATTTGGAGAGCCTTTGATTCAAGGCTTTTGCAGGACTTTTGGCATGAGACTTCCTAGTGGGGAAAGGCGAGAATGGTTGAAACCAATAATGTTTAGTGCAGGCATCGGGCAGATCGACCATATTCATATATCAAAGGGGGAGCCTGACATTGGAATGTTAGTTGTTAAGATTGGAGGCCCTGCTTATCGTATTGGTATGGGAGGTGGGGCAGCATCAAGCATGGTCAGTGGCCAGAATGATGCAGAGCTTGATTTCAATGCTGTACAACGTGGGGATGCTGAGATGGCTCAAAAATTGTATCGTGTAGTTCGTGCTTGCATAGAAATGGGAGAGAAAAATCCCATTATCAGCATTCATGATCAGGGGGCTGGTGGGAATTGCAACGTTGTGAAGGAAATTATATACCCAAAGGGTGCTGAGATAGATATCAGAGCAGTTGTGGTTGGTGATCACACAATGTCTGTTCTCGAAATTTGGGGTGCAGAATATCAAGAGCAAGATGCAATCTTGGTGAGGCCTGAAAGTCGTAACCTTTTACATTCAATCTGTAATAGAGAAAAGGTATCAATGGCTGTGATTGGTGCTATTAATGGTAGTGGACGTGTTGTTTTAGTTGACACCTTAGCAACTCAGAAATGTCTATCAAATGGACTTCCTTCTCCTTCTCCTGCCGTGGATCTTGAATTGGAGAAGGTACTTGGTGACATGCCTAAAAAATCTTTTAATTTTTCCCGAGTTGTTTATAAGCAAAATCCATTTGATCTAGCCCCATCTGTCACAATAATGGATTCTCTAAAGAGGGTATTGCATTTACCATCTGTTTGCTCAAAGCGCTTCTTGACAACAAAAGTTGATAGGTGTGTTACTGGTCTCGTTGCACAGCAGCAAACTGTTGGTCCGTTGCAAATTCCTCTTGCTGATGTTGCAGTTATTGCTCAGACTTTCACTGATGTGACTGGAGGTGCATGTGCCATTGGGGAGCAACCAATCAAAGGTTTGCTAGACCCTAAAGCAATGGCAAGATTAGCTGTTGGAGAAGCACTCACAAACCTTGTATGGGCAAAGGTCACTTCTCTATCTGATGTTAAGGCAAGTGGTAACTGGATGTATGCTGCCAAGCTTGATGGGGAAGGAGCTGCCATGTACGATGCTGCTCTATCTTTGTCAGAAGCAATGATTGAACTTGGTATTGCTATTGATGGTGGGAAAGACAGCCTTTCTATGGCAGCCCATGCTGGAGGTGAAGTTGTCAAGGCTCCAGGAAACCTTGTTATTAGTGTTTATGTTACTTGTCCTGATATTACAAAAACAGTTACACCTGATTTGAAACTTGAAGATGATGGTGTTTTGCTTCATATTGATCTAGCAAAAGGAAAGCGACGATTAGGTGGATCTGCTCTTGCCCAGGTGTTTGACCAAATTGGGGATCAGTGTCCTGATCTTGATGATGTTCCTTACTTTAAAAGGGTCTTTGAGACTGTCCAAGATCTTCTTACAGATGGATTGATCTCTGCTGGACATGACATAAGTGATGGTGGATTTCTAGTATGTGCTTTAGAGATGGCATTTGCTGGAAATTGTGGGTTCATTTTGGACTTGACATCAAAGGGAAATAGTCTTTTTGAAACCCTATATGCAGAAGAACTTGGGTTAATTGTTGAGGTGAGCAAGACAAATTTAGATACTGTGCTAAATAAGTTAAACAATGCTGGTGTTATTGGTGAGATTGTTGGACACTTAACCGCTACTTCATTGATAGAAGTTAAGGTTGATGGGGTCACTTATTTGAAAGAAAACACCTCTACCCTCAGGGATATGTGGGAAGAAACCAGTTTTCAGCTGGAAAAGTTCCAAAGGCTGGCATCTTGTGTTGATATGGAAAGAGAAGGATTAAAACATAGATATGCACCTTCATGGAAACTATCCTTTTCTCCTTCTTTCACTGACAAAAAGTACATGCTTGCAACTTCGAAACCAAAAGTTGCTGTGATTAGAGAAGAAGGCAGCAATGGAGATAGAGAAATGGCTGCAGCATTTTATGCTGCTGGTTTTGAACCATGGGATATTACAATGTCAGACCTTCTTAATGGAGTGATCTCTTTGCTGGAGTTCCGTGGGGTTGCTTTTGTTGGTGGATTTAGTTATGCGGATGTGCTTGATTCTGCAAAAGGATGGTCTGCTTGTATAAGATTTAATGAGCCTCTTATAAAGCAGTTTCAAGAGTTTTACAACCGTCCTGATACTTTCAGCCTTGGAGTTTGTAATGGGTGTCAACTAATGGCTTTGTTGGGATGGGTACCAGGCCCTCAGGTTGGAGGTGTCCTTGGTGCTGGTGGAGATCTTTCACAACCAAGATTCATTCACAATGAGTCTGGGCGATTTGAGTGCCGCTTTACAAGTGTGACCATAAAGGACTCACCAGCAATGATGTTTAAAGGTATGGAGGGTAGTACTCTTGGGGTATGGGCTGCACATGGTGAGGGAAAAGCATATTTCCCTGATGGAGGTGTGCTGGATCGTATTGTACATTCCGAGTTAGCTCCTCTGAGATATTGTGATGATGGTGGCAATCCAACAGAGAAATATCCTTTCAACGTAAATGGCTCTCCTTTAGGGGTTGCAGCTATTTGTTCTCCGGATGGACGGCATCTTGCCATGATGCCTCACCCAGAGCGTTGCTTCTTGATGTGGCAGTTCCCATGGTACCCAAAGCAATGGGATGTGGACAAAAAGGGGCCTAGTCCATGGCTACGCATGTTCCAAAATGCTAGAGAGTGGTGCTCTTGA 4446 0.4238 MFDSLLPVLEYWSFEAEQRDAQNKTLFQRSFSLSALKQSRETHKRRRCSKLLNIPGVRILHCSFQMALLNNMAAAGEIGAAEFLQGSCRQSLFFVKKSHWQKNNLLWGTVWRRNQVRGSSRRALPLRCHAQTNPRVVVSGAVSSSIDDQSSLIEKPALEVIHFYRVALIQESATTELLKEMKTKISDRIVALQTEQCFNIGIEAKLSSNKLSVLKWLLQETYEPEALQTESFLEKRRKEGLSTVIIEVGPRLSFTTAWSANAIAICRACGLTEVTRLERSRRYLLYTQGDLEDFQINEFAAMVHDRMTECIYIQKLTSFETSVVPEEVYYIPIMEKGQKALEEINQQMGLAFDDQDIQYYTKLFREDIKRDPTNVELFDIAQSNSEHSRHWFFTGKMTIDGQLMDKTLMQIVKRTLQANPNNSVIGFKDNSSAIRGFPVKQLRPVWPGSTCPLNLASCDLDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNMPGSYAQWENSSFTYPSNLASPLQILLDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHIHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRVVRACIEMGEKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAVVVGDHTMSVLEIWGAEYQEQDAILVRPESRNLLHSICNREKVSMAVIGAINGSGRVVLVDTLATQKCLSNGLPSPSPAVDLELEKVLGDMPKKSFNFSRVVYKQNPFDLAPSVTIMDSLKRVLHLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVIAQTFTDVTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGAAMYDAALSLSEAMIELGIAIDGGKDSLSMAAHAGGEVVKAPGNLVISVYVTCPDITKTVTPDLKLEDDGVLLHIDLAKGKRRLGGSALAQVFDQIGDQCPDLDDVPYFKRVFETVQDLLTDGLISAGHDISDGGFLVCALEMAFAGNCGFILDLTSKGNSLFETLYAEELGLIVEVSKTNLDTVLNKLNNAGVIGEIVGHLTATSLIEVKVDGVTYLKENTSTLRDMWEETSFQLEKFQRLASCVDMEREGLKHRYAPSWKLSFSPSFTDKKYMLATSKPKVAVIREEGSNGDREMAAAFYAAGFEPWDITMSDLLNGVISLLEFRGVAFVGGFSYADVLDSAKGWSACIRFNEPLIKQFQEFYNRPDTFSLGVCNGCQLMALLGWVPGPQVGGVLGAGGDLSQPRFIHNESGRFECRFTSVTIKDSPAMMFKGMEGSTLGVWAAHGEGKAYFPDGGVLDRIVHSELAPLRYCDDGGNPTEKYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKQWDVDKKGPSPWLRMFQNAREWCS 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1228 1481 Gene3D - 1156 1481 IPR029062 -
Mibi08g1228 1481 SUPERFAMILY PurM C-terminal domain-like 999 1195 IPR036676 -
Mibi08g1228 1481 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 324 384 - -
Mibi08g1228 1481 SUPERFAMILY Class I glutamine amidotransferase-like 1209 1480 IPR029062 -
Mibi08g1228 1481 SUPERFAMILY PurS-like 161 319 IPR036604 -
Mibi08g1228 1481 CDD PurL_repeat2 860 1128 - -
Mibi08g1228 1481 FunFam Phosphoribosylformylglycinamidine synthase, putative 800 984 - -
Mibi08g1228 1481 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1213 1457 - -
Mibi08g1228 1481 CDD PurL_repeat1 376 759 - -
Mibi08g1228 1481 FunFam Putative phosphoribosylformylglycinamidine synthase 324 384 - -
Mibi08g1228 1481 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 159 1481 - -
Mibi08g1228 1481 FunFam Phosphoribosylformylglycinamidine synthase, putative 1156 1481 - -
Mibi08g1228 1481 Gene3D - 986 1155 IPR036676 -
Mibi08g1228 1481 Gene3D - 591 765 IPR036676 -
Mibi08g1228 1481 SUPERFAMILY PurM N-terminal domain-like 392 599 IPR036921 -
Mibi08g1228 1481 SMART GATase_5_2 1211 1480 - -
Mibi08g1228 1481 SUPERFAMILY FGAM synthase PurL, linker domain 324 391 - -
Mibi08g1228 1481 Gene3D - 799 984 IPR036921 -
Mibi08g1228 1481 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 197 313 IPR040707 -
Mibi08g1228 1481 Pfam CobB/CobQ-like glutamine amidotransferase domain 1211 1480 - -
Mibi08g1228 1481 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 341 390 IPR041609 -
Mibi08g1228 1481 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 163 1479 IPR010073 GO:0004642|GO:0006189
Mibi08g1228 1481 SUPERFAMILY PurM N-terminal domain-like 811 992 IPR036921 -
Mibi08g1228 1481 FunFam Probable phosphoribosylformylglycinamidine synthase 385 590 - -
Mibi08g1228 1481 Gene3D - 385 590 IPR036921 -
Mibi08g1228 1481 FunFam Phosphoribosylformylglycinamidine synthase, putative 591 769 - -
Mibi08g1228 1481 SUPERFAMILY PurM C-terminal domain-like 601 835 IPR036676 -
Mibi08g1228 1481 FunFam Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 990 1156 - -
Mibi08g1228 1481 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 160 1481 IPR010073 GO:0004642|GO:0006189
Mibi08g1228 1481 Pfam AIR synthase related protein, C-terminal domain 604 757 IPR010918 -
Mibi08g1228 1481 Pfam AIR synthase related protein, C-terminal domain 1014 1142 IPR010918 -
Mibi08g1228 1481 CDD GATase1_FGAR_AT 1214 1477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1228 Mibi-ChrMibi08 27838659 27843847 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1228 08 27838659 27843847 Mibi08g1228 08 27838659 27843847 ECH