Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1214 ATGCCTTTCATCTCCCAGTTTCAACGTCAGTCTGATTACAATCTCTTCAGCCCCACCACTCCCATCGTCATCGACAATGGCGCCTCTTATTTTCGTATCGGATGGGCTGGAGAGAGTGAACCCCGTGTTGTTTTCCGCAACATTGTGCAAAGGCCTCGTCATAAAGTCACCGGTGAAACTGTCACAATTGTTGGTGATCATAACCCAGCATTGATGAAGTATTTTGACTGCACTCGCTCTGGACCACGATCAGCATTTGATAGCAATGTTGTCTACCAGTTTGAAATCATGGAATACATTCTTGACTTTGGCTTTGACCGGCTTGGTGCAAATGGATCAGAGATTGATCATCCCGTCTTGATCACAGAATGTGTGTGTAATCCAGTCCAATCTCGTAGTAAAATGGCAGAACTTCTTTTTGAGACTTATGGTGTTCCATCAGTAGCCTTTGGGGTTGATGCAGCTTTCAGCTACAAGTATAATCAACACCATGGAGTGTGCAACAAAGATGGTCTTGCTATGTGTCCTGGATTTACCACAACCCATGTGATTCCGTTTGTAGATGGGGAACCTGTTTATAAAGGATGCTGTCGTACAAATATTGGTGGTTTCCATGTAACTGATCATTTAAAGCAACTTCTTTCACTTAAATATCCCTACCATTTGGCTAGATTTACGTGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACAGGATTATGCTTCTGAAGCACGGCTGTTTCAGAGAGGAGGGAAAGAAGCTGAAGAGAAAACCAGATGTTGGCAGCTTCCTTGGGTTCCACCACCAACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATTAGAGAGAAACAAGGTCAAAGGTTGAGAGAAATGGCTGAGGCAAAGAGATCATCCAGAATAAATGAACTGGAAAATGAATTGCATGGCTTGGAGTTTCTCTTACAGCAGATTGCACAAGTTGAAGAGAGTGACATCCCATCTTTCCTATCGGACACTGGCTATGTCTCTAGGCAGGAGATAGAATCTGCCCGTGCCAAAGTTACACAATCTTTACGGAAAGCAAAAGGTGAACCAAAGAGTGAACTAGCTGAAACTGAAAAGGCTGACTCTGCTAATAGCGAGAAGTATTTTCTTATAAACATCCCTGATGAAAATCTAACTCCAGAACAGCTTATTGAAAAGAAGAAGCAGTTGTCACTTAAGTCCATGTCTGAAGGGCGGCAGCGATTAAAGCAGAAACGCTATGAGGAGGAAATGCAACGAGAGAGGAGATTACAGCTAGAGGAGGAGAAACGCCTAGAGAACCCAGAGCTGTTCCTGGAGCAATTGCATGCTAAATACAAAGATCTGTCAGAAAAAGTTGACCAACGAAAAAGACTCAAGACAAATGGCAACCACACAAATGGAAATAATTTGTCTGGTGGTGTTGGTCGTGGTGAGAGGCTAAATGCTGCTCAAAGGGAAAGGATGCGCCTGTTGACAACTGCAGCCTTTGATCGTGGTAAAGGCGAGGATACATTTGGTGCCAGAGATGAAGATTGGCAACTTTACAAATTGATGAGTAAGGATAATGATGATGACGATGAGGGGCCAGATGAAGATGAGGCAGAATTGGCCCGCATCTCTTCTAGGCTCCAGGATTTGGATCCTACATTTGTACCCAAGTTAGAAACTGGCAATGCACAAACTGCCGAGGTGGTGCCACGTCTTCGACCTCTCACCAAGGAGGATTTCCAGATTGTTCTTGGGGTTGAAAGATTCAGATGCCCTGAGATTTTGTTCAATCCAAACTGGATTGGGGTTGATCAGGTAGGCTTAGATGAGATGGCTGGGGTGTCAATAAGGCGGTTGCCGGATAAGGATGAAAGTTTGGAAGAGAGACTAACTGATTCAATACTTGTGACTGGTGGAAGTTCTCTGTTTCCTGGTATGATAGAACGCCTGGAAGCTGGTATTAGGATGATTAGACCCACTGGATCAGCCATAAATATAGTTAGAGCATTGGATCCAGTTTTGGATGCATGGAGGGGAGCTTCTGCTTATGCCTCAGCTCATCTGTTTCATACACAAACTTTTAGTAGGGCTGATTATTATGAAAAGGGTGAAGACTGGCTTCGCAGTTATCAACTCCGATATACATTATAG 2172 0.4401 MPFISQFQRQSDYNLFSPTTPIVIDNGASYFRIGWAGESEPRVVFRNIVQRPRHKVTGETVTIVGDHNPALMKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFGFDRLGANGSEIDHPVLITECVCNPVQSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQHHGVCNKDGLAMCPGFTTTHVIPFVDGEPVYKGCCRTNIGGFHVTDHLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIAQDYASEARLFQRGGKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSRINELENELHGLEFLLQQIAQVEESDIPSFLSDTGYVSRQEIESARAKVTQSLRKAKGEPKSELAETEKADSANSEKYFLINIPDENLTPEQLIEKKKQLSLKSMSEGRQRLKQKRYEEEMQRERRLQLEEEKRLENPELFLEQLHAKYKDLSEKVDQRKRLKTNGNHTNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWQLYKLMSKDNDDDDEGPDEDEAELARISSRLQDLDPTFVPKLETGNAQTAEVVPRLRPLTKEDFQIVLGVERFRCPEILFNPNWIGVDQVGLDEMAGVSIRRLPDKDESLEERLTDSILVTGGSSLFPGMIERLEAGIRMIRPTGSAINIVRALDPVLDAWRGASAYASAHLFHTQTFSRADYYEKGEDWLRSYQLRYTL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1214 723 FunFam Actin-related protein 5 583 612 - -
Mibi08g1214 723 PANTHER ACTIN 21 711 IPR004000 -
Mibi08g1214 723 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Mibi08g1214 723 SUPERFAMILY Actin-like ATPase domain 170 716 IPR043129 -
Mibi08g1214 723 FunFam Putative actin-related protein 5 683 711 - -
Mibi08g1214 723 SUPERFAMILY Actin-like ATPase domain 19 159 IPR043129 -
Mibi08g1214 723 Coils Coil 309 329 - -
Mibi08g1214 723 Coils Coil 449 469 - -
Mibi08g1214 723 Coils Coil 421 441 - -
Mibi08g1214 723 SMART actin_3 19 719 IPR004000 -
Mibi08g1214 723 FunFam Actin-related protein 5 18 170 - -
Mibi08g1214 723 FunFam Actin-related protein 5 171 202 - -
Mibi08g1214 723 Gene3D Actin; Chain A, domain 4 201 288 - -
Mibi08g1214 723 MobiDBLite consensus disorder prediction 358 378 - -
Mibi08g1214 723 FunFam Actin-related protein 5 203 257 - -
Mibi08g1214 723 Gene3D - 18 169 - -
Mibi08g1214 723 FunFam ARP5 actin-related protein 5 homolog 613 682 - -
Mibi08g1214 723 Pfam Actin 588 715 IPR004000 -
Mibi08g1214 723 Pfam Actin 19 268 IPR004000 -
Mibi08g1214 723 Gene3D - 589 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1214 Mibi-ChrMibi08 27530259 27535656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1214 589 710 Miscellaneous Gene Families AT2G42100 32.787 2.49e-15 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1214 08 27530259 27535656 Mibi08g1214 08 27530259 27535656 CCT
Mibi08g1214 08 27530259 27535656 Mibi08g1214 08 27530259 27535656 ECH