Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1192 ATGGCTGAGCCGAACCCCGTGAATCTGCAGTTCACCTTCACAATGCCTCATTCAACTCATCATCCTTCTTTTGCTTTCCCACCTTCTTCTTCTTCTTCTTTAGCCCACCCTCTCCCTCCTCCTCCGCCTCCGCCTCCGCCTCCACCTACAGCTTCCAAACCACCTCGCCTCGCCTCCTCCGACCCTTCTACTTCTACCTCTCGCATTCCAGACCATTTGATGCACAAAAACCGGTTACAAGAATTTGCTCAAAGGTCAAACATGCCACTACCCGTTTACCACACTGTCAATGAAGGAGCCGCTCATGCCCCAAGGTTTAGGGCGACAGTGTGTGTTGACGGGAAGCAGTATACTTCCCAAAATGTTTTTACCATCCGAAAAGCTGCTGAACAAGATGTGGCCAAGCTTGCTTATGAGAAAATAGTGGCTGAGATAAAAGATGAAGGGCTTCCTGATATTTTTGAGAAAACTATGTTTTTCAAGTCCATCTTAAATGAATTTGCTGCCAAGATGAATCTGAAAAAAGTTGCATACCGTACTGTCAAGCCGGAAGGGCATCCATTTTTTGTATCATCTTTGGTTTTCAATGGTAAATCCTACACTGGTGATCCAGCTAGAAACAAAAAGGAGGCTGAGCAATTGGCTGCACGAACTGCCATTCTTTCAAATCTAAGTGATTCTAGGTTGGGAACACGGCTTTCTGAGGTAATAAAGTCAAAATTAAAATTTTGTGCTGCAATCAGCAACGTGAAGGAGGCACAACATATAAATACTGCTTCACATATAGCTAGCTCTGGACATGTATCTGTTAGTGCAGCTCCTGGGACAGTGAATATTAATGAAAATAGCGACAAATTTGAGGTCCCAAGAGGGCCTCAACAAGCATTCCAGATGTCAGAACAAGGAAAATGCCCCGAAGACTCCAAACCTTCAAATCTGTCTCAGCAAGCAGGTGAACTACAGCATACGGATGATGGTTCGAGTTTGAAGCGCAAAAAGAACAAGAAAAAGGCCAATAAGAAGCCACGGATGGATCCTCTGCCACCAATTGCTGCATCTCCGCTCAATCAAGCCCCTCCTCCTGTCTTGTCCTCATTTCCTTTGGGCCAACCTAGCTGTTCAGTGGCGCAGTAA 1134 0.4559 MAEPNPVNLQFTFTMPHSTHHPSFAFPPSSSSSLAHPLPPPPPPPPPPPTASKPPRLASSDPSTSTSRIPDHLMHKNRLQEFAQRSNMPLPVYHTVNEGAAHAPRFRATVCVDGKQYTSQNVFTIRKAAEQDVAKLAYEKIVAEIKDEGLPDIFEKTMFFKSILNEFAAKMNLKKVAYRTVKPEGHPFFVSSLVFNGKSYTGDPARNKKEAEQLAARTAILSNLSDSRLGTRLSEVIKSKLKFCAAISNVKEAQHINTASHIASSGHVSVSAAPGTVNINENSDKFEVPRGPQQAFQMSEQGKCPEDSKPSNLSQQAGELQHTDDGSSLKRKKNKKKANKKPRMDPLPPIAASPLNQAPPPVLSSFPLGQPSCSVAQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1192 377 MobiDBLite consensus disorder prediction 1 72 - -
Mibi08g1192 377 Gene3D - 55 145 - -
Mibi08g1192 377 Gene3D - 146 231 - -
Mibi08g1192 377 MobiDBLite consensus disorder prediction 56 70 - -
Mibi08g1192 377 PANTHER - 74 361 - -
Mibi08g1192 377 MobiDBLite consensus disorder prediction 33 55 - -
Mibi08g1192 377 MobiDBLite consensus disorder prediction 347 366 - -
Mibi08g1192 377 SUPERFAMILY dsRNA-binding domain-like 72 141 - -
Mibi08g1192 377 MobiDBLite consensus disorder prediction 7 32 - -
Mibi08g1192 377 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 74 143 IPR014720 -
Mibi08g1192 377 SUPERFAMILY dsRNA-binding domain-like 155 222 - -
Mibi08g1192 377 Pfam Double-stranded RNA binding motif 76 140 IPR014720 -
Mibi08g1192 377 Pfam Double-stranded RNA binding motif 161 220 IPR014720 -
Mibi08g1192 377 SMART DRBM_3 75 142 IPR014720 -
Mibi08g1192 377 SMART DRBM_3 160 224 IPR014720 -
Mibi08g1192 377 MobiDBLite consensus disorder prediction 274 377 - -
Mibi08g1192 377 MobiDBLite consensus disorder prediction 294 323 - -
Mibi08g1192 377 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 159 220 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1192 Mibi-ChrMibi08 27214640 27218333 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1192 08 27214640 27218333 Mibi08g1192 08 27214640 27218333 CCT
Mibi08g1192 08 27214640 27218333 Mibi08g1192 08 27214640 27218333 ECH