Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1189 ATGGACGAAGAAACTCGCCGGATCTTCAACAAGTTCGACATTAACGGCGACGGCAAGATCTCGAGCTCTGAGCTGAAGAAGATGCTGCTAACACTCGATTCCAAAACGACGTCGAAGGAGATCAAGCGAATCATGGAGGAGCTTGACAAGAACGGCGACGGCTACATTGATCTCAAGGAGTTCGCCGAATTCCATCAATCTGGCGGCGGAGAAAAGCTCGCAGACTCACGAGAGCTTCGCGACGCCTTCGATCTGTACGACTTGGACAAGAACGGACTCATCTCTGTCAACGAATTGCATGCGGTTCTTCGCAAGTTAGGCGAGAAGAGATCCTTGAGCGATTGCCGCAAAATCATCAGTTCTGTTGATACTGACGGTGACGGTAACGTCAATTTCGAGGAGTTCAAGAGGATGATGACTCGCGCCTAG 429 0.5058 MDEETRRIFNKFDINGDGKISSSELKKMLLTLDSKTTSKEIKRIMEELDKNGDGYIDLKEFAEFHQSGGGEKLADSRELRDAFDLYDLDKNGLISVNELHAVLRKLGEKRSLSDCRKIISSVDTDGDGNVNFEEFKRMMTRA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1189 142 ProSiteProfiles EF-hand calcium-binding domain profile. 74 109 IPR002048 GO:0005509
Mibi08g1189 142 Pfam EF-hand domain pair 3 64 IPR002048 GO:0005509
Mibi08g1189 142 Pfam EF-hand domain pair 78 139 IPR002048 GO:0005509
Mibi08g1189 142 Gene3D - 70 142 - -
Mibi08g1189 142 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Mibi08g1189 142 SMART efh_1 78 106 IPR002048 GO:0005509
Mibi08g1189 142 SMART efh_1 40 68 IPR002048 GO:0005509
Mibi08g1189 142 SMART efh_1 114 142 IPR002048 GO:0005509
Mibi08g1189 142 SMART efh_1 4 32 IPR002048 GO:0005509
Mibi08g1189 142 FunFam calmodulin-like protein 3 72 142 - -
Mibi08g1189 142 CDD EFh 78 140 IPR002048 GO:0005509
Mibi08g1189 142 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Mibi08g1189 142 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 78 140 - -
Mibi08g1189 142 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Mibi08g1189 142 ProSiteProfiles EF-hand calcium-binding domain profile. 110 142 IPR002048 GO:0005509
Mibi08g1189 142 SUPERFAMILY EF-hand 3 140 IPR011992 -
Mibi08g1189 142 ProSitePatterns EF-hand calcium-binding domain. 123 135 IPR018247 -
Mibi08g1189 142 CDD EFh 4 66 IPR002048 GO:0005509
Mibi08g1189 142 Gene3D - 1 68 - -
Mibi08g1189 142 ProSitePatterns EF-hand calcium-binding domain. 87 99 IPR018247 -
Mibi08g1189 142 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1189 Mibi-ChrMibi08 27157673 27158101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1189 3 140 EF-hand Containing Proteins AT1G18210 51.449 2.13e-46 146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1189 08 27157673 27158101 Mibi08g1189 08 27157673 27158101 CCT