Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1092 ATGGCTTCTTCTTCTTCTTCTTCCTCCTCTGCTTCAGCCCCTGTTTTGAAGCGAACAAACTCGATTGCAGAAAACATGCCTGATGCATTGCGTCAGAGTAGGTACCATATGAAGAGGTGCTTTGCCAAGTACCTTGAGAAGGGAAGAAGGATCATGAAGCTTCACCATTTGATGGAGGAACTGGAGCAAGTCATTGATGATATTACTGAGAGGAACCAAGTCTTGGAGGGCAATCTTGGCTACATATTGGGTTCTACTCAGGAAGCTGTGGTTAGTCCACCATATGTTGCCTTTGCCATAAGGAGGAATCCTGGGGTTTGGGAATTTGCTCAAGTCAGCTCTGAGAATCTCTCTGTTGTGGAAATCTCCTCCACTGATTACCTGAAATTGAAAGAATCAATATATGATGAAAACTGGGTAAATGATGAGCATGCATTTGAAGCAGATTTTGGAGCATATGACTTCCCTATTCCTCATTTAACCCTGCCTTCTTCAATCGGAAAAGGAATGAATTTTGCTTCAAAGTTCTTGTCTTCAAAGCTAAGTGGGAAAGTGGAAAATACACAAGCTCTAGTGGACTACTTGTCAGCACTAAGTCATGGGGGACAAAAGTTGATGATCAATGACACCCTGAACTCAGCTGCAAAGCTTCAGCTGGCATTAATAGTCGCAGACGTGTTCCTTGCAGGACTACCTAAGGACACTTCATATCAGAATTTTGAGCTAAGGCTCAAAGAGTGGGGTTTTGAGAGAGGCTGGGGTGATACTGCAGAAAGAGTGAAGGAGACAATGAACATTCTGTCTGAAGTACTCCAAGCACCGGACCCCAAGAATCTCGAGAAATTTTTTAGCAGAATTCCCACAATTTTCAATGTGGTGATCTTCTCTGTTCATGGTTATTTTGGACAAGCTGATGTCCTTGGCTTGCCAGACACCGGTGGTCAGGTAGTTTACATCTTGGATCAAGTAAGAGCTCTGGAAGCAGAGTTGCTTCTCAGAATTAAGCAGCAAGGCCTAACTGTGAAACCTCAAATTCTTGTTGTTACAAGGCTCATACCTGATGCTCGTGGAACCACATGTGATCAAGAGTTAGAACCAATCATTGATACCAAGCACTCCCACATTCTACGTGTGCCCTTCGTCACAGAAAAAGGAAATCTTCGTCAATGGATTTCTCGCTTTGACATTTATCCATATCTTGAGAGGTTTACTCAGGATGCCACAACAAAGATTCAGGAGCACCTTGAAGGGAAGCCGGATCTTGTTATTGGAAATTACACAGATGGGAATTTGGTAGCATCTCTTATGGCTAACAAACTTGGGATAACTCTGGGAACTATAGCTCACGCTTTAGAGAAGACAAAGTATGAAGATTCAGATGTGAAGTGGAAGGAGCTTGATCCCAAGTATCATTTCTCATGCCAATTCATGGCTGATACAATTGCAATGAATGCAGCAGATTTCATCATCACCAGCACATACCAGGAAATTGCTGGAAACAAAGATAGACCTGGACAGTATGAAAGTCATGCTGCGTTTACACTTCCAGGGCTCTGTAGGGTTGTATCAGGAATAAACGTATTTGATCCCAAATTCAACATAGCCGCACCTGGAGCTGACCAGTCTGTCTATTTCCCATATACAGACAAAGACAAAAGACTATCTCAATTTCACCCTGCCATTGAAGAGCTCCTTTATGGAAAAGTGGATAACAGTGAGCATATTGGATCATTATCAGACAGGAGAAAACCTATCATCTTCTCAATGGCAAGGCTTGATGTTGTAAAGAACTTATCTGGGTTAGTTGAGTGGTATGGGAAGAACAAGAGATTGAGAAACTTGGTAAACCTTGTCATAGTTGGAGGCTTCTTTGACCCTTCAAAATCCAAAGACAGGGAGGAAATGGCAGAAATAAAAAAGATGCATGCTTTAATTGATAAGTACCAGCTAAAGGGTCAATTCAGATGGATTGCTGCACAGACTAACAGACATCGCAATGGAGAACTCTACCGATGCATTGCTGACACCAAGGGAGCTTTTGTGCAGCCTGCTTTATATGAAGCTTTTGGGCTTACTGTCATTGAAGCAATGAACTGTGGCTTGCCCACTTTTGCCACAAATCAAGGAGGTCCAGCTGAAATTATTGTTGATGGAATCTCCGGATTCCATATTGATCCCTTGCATGGTGACGAATCAAGCAACAAAATTGCTGATTTCTTTGAGGCTTGCAAGGTGGATTCAACACAGTGGAACAAGATTTCATCTGGCGGGTTGAAACGCATAAATGAATGTTACACCTGGGAGATTTATGCAAATAGGCTACTGAACATGGGAAGCATGTACACTTTCTGGAGGACAGTGAATAAGGAGCAAAAAGAAGCAAAACAAAGATACATCCATATGTTTTATAACCTTTTGTTCAAGAATTTGGTGAAGACATTACCTCTTCCAAGTGATGAATCTAAAAAACCAGTTACCAAGCAGCAGTCTGTTAAACAGCAGGGCACAAGACGTGTACAATCCACATTGTCAAGGTTACTGGGAACTTGA 2550 0.4224 MASSSSSSSSASAPVLKRTNSIAENMPDALRQSRYHMKRCFAKYLEKGRRIMKLHHLMEELEQVIDDITERNQVLEGNLGYILGSTQEAVVSPPYVAFAIRRNPGVWEFAQVSSENLSVVEISSTDYLKLKESIYDENWVNDEHAFEADFGAYDFPIPHLTLPSSIGKGMNFASKFLSSKLSGKVENTQALVDYLSALSHGGQKLMINDTLNSAAKLQLALIVADVFLAGLPKDTSYQNFELRLKEWGFERGWGDTAERVKETMNILSEVLQAPDPKNLEKFFSRIPTIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVRALEAELLLRIKQQGLTVKPQILVVTRLIPDARGTTCDQELEPIIDTKHSHILRVPFVTEKGNLRQWISRFDIYPYLERFTQDATTKIQEHLEGKPDLVIGNYTDGNLVASLMANKLGITLGTIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTIAMNAADFIITSTYQEIAGNKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTDKDKRLSQFHPAIEELLYGKVDNSEHIGSLSDRRKPIIFSMARLDVVKNLSGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKKMHALIDKYQLKGQFRWIAAQTNRHRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGISGFHIDPLHGDESSNKIADFFEACKVDSTQWNKISSGGLKRINECYTWEIYANRLLNMGSMYTFWRTVNKEQKEAKQRYIHMFYNLLFKNLVKTLPLPSDESKKPVTKQQSVKQQGTRRVQSTLSRLLGT 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1092 849 Gene3D Glycogen Phosphorylase B; 293 810 - -
Mibi08g1092 849 FunFam Sucrose synthase 540 767 - -
Mibi08g1092 849 Pfam Sucrose synthase 18 566 IPR000368 GO:0005985|GO:0016157
Mibi08g1092 849 Gene3D - 159 288 - -
Mibi08g1092 849 FunFam Sucrose synthase 159 288 - -
Mibi08g1092 849 MobiDBLite consensus disorder prediction 822 849 - -
Mibi08g1092 849 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 308 776 - -
Mibi08g1092 849 Pfam Glycosyl transferases group 1 578 741 IPR001296 GO:0016757
Mibi08g1092 849 MobiDBLite consensus disorder prediction 818 849 - -
Mibi08g1092 849 FunFam Sucrose synthase 21 158 - -
Mibi08g1092 849 Gene3D - 20 158 - -
Mibi08g1092 849 PANTHER - 16 819 IPR012820 GO:0005985|GO:0016157
Mibi08g1092 849 Coils Coil 51 78 - -
Mibi08g1092 849 TIGRFAM sucr_synth: sucrose synthase 35 815 IPR012820 GO:0005985|GO:0016157
Mibi08g1092 849 Gene3D Glycogen Phosphorylase B; 540 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1092 Mibi-ChrMibi08 25624213 25630372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1092 14 820 Glycosyltransferase AT4G02280 56.877 0.0 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1092 08 25624213 25630372 Mibi08g1092 08 25624213 25630372 ECH