Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0885 ATGGCGCCTGTGAGAACCACAGGCGCTATTGTCGGCGTGGCTGCCATCTTCGTCTCTGTCGCTTTCTCCTATCTCATCTGCTACCGCCGTTCTAAATCTTCCTCCATGAAAACTCACTCAAATTCGTCAAAGAAGAAATCTAGGAAGGGGCTTGTTGATGCCATTGGGAATACGCCTTTAATTCGAATTAACTGCCTCTCTGATGCCACGGGTTGTGAGATTCTTGGGAAGTGCGAGTTTTTGAACCCTGGAGGGAGTGTGAAAGATCGAGTTGCAGTGAAAATTATTGAAGAGGCTTTATCCTCTGGCCAGCTACTCCCAGGTGGAATAGTTACTGAAGGGAGTGTTGGAAGCACTGCTGTTAGCCTTGCCACTGTTGCGCCTGCCTATGGATGCAAATGCCATTTAGTTATCCCAGATGATGTTGCAATTGAAAAGGCTCAGACAATTGAAGCCCTAGGAGCTACCGTTGAAAGAGTTAGACCAGTGTCAATCACTCACAAGGACCATTTTGTAAATGTTGCGAGAAGACGGGCATCAGAAGCAAATGAGTTGATGTTAGAACAAAGAAAAAAATTACAATTAAATGGTGGAAGTATTAAACCGATTAATGGTTACAGATCTGATGGAGATAATTACAGTTCAGTTTTTTCTACGGATTGTCAAGGTGGCTTCTTTGCCGATCAATTTGAGAATTTGGCAAACTTCAGGGCCCACTTTGAGGGTACAGGACCTGAGATTTGGGAACAGACGAACGGAAAGTTGGATGCTTTTGTTGCAGGAGCTGGTACTGGTGGCACTTTGGCTGGTGTTTCTAGGTTTTTTCAGGAAAAGAATCCAAACATTAAGTGTTTCCTCATAGATCCTCCTGGTTCTGGTTTGTTCAATAAGGTAACAAGGGGGGTGATGTACACCAAACAGGAAGCAGAAGGAAAAAGGCTCAAGAATCCTTTTGATACAATAACAGAAGGCATTGGATGTAACAGGATAACAAAAAATTTTATGATGGCCAAAGTTGATGGGGCATTTCAAGCAACAGATATGGAGGCTGTTGAAATGTCTAGGTTTCTTTTGAAAAATGATGGACTATTTCTTGGGAGTTCTTCATCAATGAATTGTGTTGGAGCAGTTAGAGTAGCACAGTCGCTTGGCCCTGGTCATACAATTGTAACCATTCTCTGTGACAGTGGAATGAGACATCTGAGTAGATTCCACAATCCTCAATACCTGTCTCAGCTTGGCCTGAATCCTAAAGCAACTGGATTAGAGTTTCTGGGAAGGAACAGAAGTAGGATTCATTTCTCTCATGTTTTCTCTCTTTCTCTCATCACTTCAGTTAAATTATTGTTTGAGAAGATTTAG 1362 0.4258 MAPVRTTGAIVGVAAIFVSVAFSYLICYRRSKSSSMKTHSNSSKKKSRKGLVDAIGNTPLIRINCLSDATGCEILGKCEFLNPGGSVKDRVAVKIIEEALSSGQLLPGGIVTEGSVGSTAVSLATVAPAYGCKCHLVIPDDVAIEKAQTIEALGATVERVRPVSITHKDHFVNVARRRASEANELMLEQRKKLQLNGGSIKPINGYRSDGDNYSSVFSTDCQGGFFADQFENLANFRAHFEGTGPEIWEQTNGKLDAFVAGAGTGGTLAGVSRFFQEKNPNIKCFLIDPPGSGLFNKVTRGVMYTKQEAEGKRLKNPFDTITEGIGCNRITKNFMMAKVDGAFQATDMEAVEMSRFLLKNDGLFLGSSSSMNCVGAVRVAQSLGPGHTIVTILCDSGMRHLSRFHNPQYLSQLGLNPKATGLEFLGRNRSRIHFSHVFSLSLITSVKLLFEKI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0885 453 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 77 95 IPR001216 GO:0006535
Mibi08g0885 453 FunFam Cysteine synthase 237 401 - -
Mibi08g0885 453 Gene3D - 237 401 IPR036052 -
Mibi08g0885 453 Gene3D - 55 84 IPR036052 -
Mibi08g0885 453 Pfam Pyridoxal-phosphate dependent enzyme 53 395 IPR001926 -
Mibi08g0885 453 Gene3D - 221 236 IPR036052 -
Mibi08g0885 453 Gene3D - 85 190 IPR036052 -
Mibi08g0885 453 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 44 407 IPR036052 -
Mibi08g0885 453 FunFam Cysteine synthase, putative 55 84 - -
Mibi08g0885 453 CDD CBS_like 56 402 - -
Mibi08g0885 453 Coils Coil 176 196 - -
Mibi08g0885 453 PANTHER CYSTATHIONINE BETA-SYNTHASE 49 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0885 Mibi-ChrMibi08 20575837 20579663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0885 55 402 Miscellaneous Gene Families AT3G04940 29.714 2.71e-34 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g0885 08 20575837 20579663 Mibi08g0885 08 20575837 20579663 ECH