Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0829 ATGGACTCTCCTCAATCTGTTGTGTCGCCGTTTAAAAGCTCTGTTTTGGGTGATAGTGAGAAACAAAAGTCTGGTCCCTTATCTAAGGACATAGAGGTCAATGGAAAGGAAGCCACCAAGAGGAATCTAGAAGATTCCATTGGTGTTCTTGATGTCTATATACATCAAGCTAGGGACATCCATAACATTTGCATATACCACAAACAAGATGTTTATGCTAAGGTTTGCTTAACTAGCAATCCTGACAACGCTGTGTCCACCAAGACCATTAATGGGGGTGGAAGAAACCCTGTGTTCAATGAGAATCTTTGCCTGAATGTTAAAACTGTTGATTCCTCTCTCAAATGTGAGATATGGATGCTGAGCAGGGTCAAGAATTATCTAGAAGATCAGCTTCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTGCTTGTTAATAGTGGAAGAACACTTGAGAAAGAATTCTCTCTTTCTTCAACTGATCTGTTCCATTCCCCTGCTGGCTTTGTCAAATTGTCCCTGGCATACAATGGAGCTTCCCCTGATGTCATGGTGATCCCTCATTTGGTCTCCACTGGGGCTGCTGCAGCCGGTGATGGCGTGGCTCTGGATCCTGAGACTACCGAGTCACTGGCAAAAGATTTGGACAAGATTGAGTTTCCGGACCCAAAGATTGCGAATGAAGACCACATTATGGTTTCAGAATATTTTGGGATATCTTGTGATGAGACCCAGTGTTCTGATTCTGATCATCAAAGCTCTGATGCAGGTGTTCAACTTGTAGAGAGCTTCTCAGCATGTAGTGTTGAGTCTGCCCAACAAACTTCCATTAACAAGGTTGATTCACCTCCAAGCATTGCTTCAACAAATGGAGTTTCTTCCCCATCACTGCAAGCTAGCTCAGACTCATCTGATGCTGTTGCTGCTGCTGCATCAAAATCTCCTGCCCAAGAACAAGTCTCCGGTACCAAAGAAGACAAGCGTGTGGTAGCTGAAGTTAAAGATGGAGGAGTGGCTGAGAGTGATTCCTCAAGCAAGGTGGTTCCAAACAAAGAAGATGGATCATTCACTAAGCCTCCTGCTATGTCTGTGAACATTGAGCCAGAACCAATGGTGGTGCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAGTTCACTGAATCGTTGGCGAAAATGAAGCTTCCGGATATTGATATCGGGTCACCGAGTTCAGGGAACTCAAGCTCAGACAAGAAATTGGAATCACCAGCATCATCAAAGAGTAACAATAACTCTCGTGTGTTTTATGGGAGCAGAGCTTTCTTCTGA 1317 0.4412 MDSPQSVVSPFKSSVLGDSEKQKSGPLSKDIEVNGKEATKRNLEDSIGVLDVYIHQARDIHNICIYHKQDVYAKVCLTSNPDNAVSTKTINGGGRNPVFNENLCLNVKTVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVNSGRTLEKEFSLSSTDLFHSPAGFVKLSLAYNGASPDVMVIPHLVSTGAAAAGDGVALDPETTESLAKDLDKIEFPDPKIANEDHIMVSEYFGISCDETQCSDSDHQSSDAGVQLVESFSACSVESAQQTSINKVDSPPSIASTNGVSSPSLQASSDSSDAVAAAASKSPAQEQVSGTKEDKRVVAEVKDGGVAESDSSSKVVPNKEDGSFTKPPAMSVNIEPEPMVVQQDIVDMYMKSMQQFTESLAKMKLPDIDIGSPSSGNSSSDKKLESPASSKSNNNSRVFYGSRAFF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0829 438 Pfam C2 domain 48 156 IPR000008 -
Mibi08g0829 438 MobiDBLite consensus disorder prediction 403 432 - -
Mibi08g0829 438 MobiDBLite consensus disorder prediction 1 33 - -
Mibi08g0829 438 MobiDBLite consensus disorder prediction 275 319 - -
Mibi08g0829 438 MobiDBLite consensus disorder prediction 320 335 - -
Mibi08g0829 438 MobiDBLite consensus disorder prediction 275 363 - -
Mibi08g0829 438 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 48 181 IPR035892 -
Mibi08g0829 438 CDD C2 50 157 - -
Mibi08g0829 438 MobiDBLite consensus disorder prediction 398 438 - -
Mibi08g0829 438 Gene3D C2 domain 43 183 IPR035892 -
Mibi08g0829 438 MobiDBLite consensus disorder prediction 1 21 - -
Mibi08g0829 438 ProSiteProfiles C2 domain profile. 23 155 IPR000008 -
Mibi08g0829 438 PANTHER EXPRESSED PROTEIN 1 438 - -
Mibi08g0829 438 SMART C2_3c 49 152 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0829 Mibi-ChrMibi08 19149158 19150474 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g0829 08 19149158 19150474 Mibi08g0829 08 19149158 19150474 ECH