Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0775 ATGTTTGGGGTCATAAGGCGAAGAGTTGCTTGTGGCAGCTCATCCCCTTTGAAAATTCGCCCAGGCCTATTACTCCCAAGTCGATTTTCTTCCATTTCTGAGAAAGAGATTGTTTGTCTTTCTCGAGGATGTCAGAATGTTCGGAATATCTATCATTCAAGTTCAAGTGGATGCTGGAGCAATTTAAAGCCCATGAGGGAGTTTTATTGTCAAGAGATTACAAGGCAAACATGGAGGCGCTCCTTTTCTTCAGATAATGGAGATCTGGTTGATGTTGTGGTCCCTCCATTAGCTGAATCTATTGCTGATGGCACTCTAGCGACCTTTTTGAAAAAACCAGGTGATAGTGTTAAAGTTGATGAACCAATTGCACAAATTGAGACTGATAAGGTGACAATTGATGTTACCAGTCCAGAGTCGGGTGTGATTCAGAAGCTCCTAGCCAATGAAGGGGATACCGTTGAACCAGGTAACAAGATAGCAATTATTTCAAGGTCCGCTGAAGCCACAACTCATGTTGCCCCATCTGAAAGTGTATCTGAGAAGCCTGCTCCTCAGCCAACCCAAAAGATCAAACAGGAGATGAAAGGACCTAAGGTTGAAGCTGCCCCTATGACAGAGAAGCCTAAGGCACCCTCTCCTCCACGGCACTCTCCCACAGAGCCACAACTTCCCCCTAAGGAAAGAGAAAGACGAGTTCCTATGACAAGACTTCGAAAGCGGGTTGCTACTCGGTTGAAAGATTCCCAAAACACATTCGCATTGCTGACAACATTCAATGAAGTTGACATGACTAACTTGATGAAGCTCCGTGCTGATTATAAGGATGTTTTTGTTGAAAAGCATGGAGTCAAATTGGGACTAATGTCTGGGTTTGTTAAAGCTGCTGTGAATGCACTTCAGCATCAGCCAATAGTGAATGCTGTCATTGATGGTGATGATATAATATACAGAGATTATATAGATATCAGCGTAGCTGTTGGCACTTCAAAGGGCCTTGTTGTGCCGGTTATTCGTAATGCTGAAAAGTTGAACTTTGCTGAAATTGAAAAGGAGATAAATAATTTTGCAAAAAAGGCAAATAATGGAACTCTATCAATTGATGAGATGGCTGGAGGGACTCTAACAATATCAAATGGTGGTGTTTATGGGAGCCTTTTGAGTACCCCTATAATCAACCCCCCTCAGTCTGCAATCTTGGGTATGCATTCTATAGTGAGCCGTCCAATGGTGGTTGGAGGTCAAGTAGTCCCAAGGCCAATGATGTATGTTGCTCTAACATATGATCATAGATTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGCGTCGAATCAAAGATGTTATTGAGGATCCTCGCAGGCTTCTTCTTGACATATGA 1380 0.429 MFGVIRRRVACGSSSPLKIRPGLLLPSRFSSISEKEIVCLSRGCQNVRNIYHSSSSGCWSNLKPMREFYCQEITRQTWRRSFSSDNGDLVDVVVPPLAESIADGTLATFLKKPGDSVKVDEPIAQIETDKVTIDVTSPESGVIQKLLANEGDTVEPGNKIAIISRSAEATTHVAPSESVSEKPAPQPTQKIKQEMKGPKVEAAPMTEKPKAPSPPRHSPTEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRADYKDVFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDISVAVGTSKGLVVPVIRNAEKLNFAEIEKEINNFAKKANNGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGGQVVPRPMMYVALTYDHRLIDGREAVFFLRRIKDVIEDPRRLLLDI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0775 459 ProSiteProfiles Biotinyl/lipoyl domain profile. 89 164 IPR000089 -
Mibi08g0775 459 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 114 143 IPR003016 -
Mibi08g0775 459 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 229 457 IPR001078 GO:0016746
Mibi08g0775 459 SUPERFAMILY CoA-dependent acyltransferases 229 458 - -
Mibi08g0775 459 SUPERFAMILY Single hybrid motif 89 176 IPR011053 -
Mibi08g0775 459 MobiDBLite consensus disorder prediction 168 236 - -
Mibi08g0775 459 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 46 458 - -
Mibi08g0775 459 Pfam Biotin-requiring enzyme 91 163 IPR000089 -
Mibi08g0775 459 Gene3D - 89 166 - -
Mibi08g0775 459 Gene3D - 216 455 IPR023213 -
Mibi08g0775 459 TIGRFAM sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 203 458 IPR006255 GO:0004149|GO:0006099|GO:0045252
Mibi08g0775 459 FunFam Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 222 457 - -
Mibi08g0775 459 MobiDBLite consensus disorder prediction 169 187 - -
Mibi08g0775 459 CDD lipoyl_domain 90 163 - -
Mibi08g0775 459 MobiDBLite consensus disorder prediction 222 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0775 Mibi-ChrMibi08 17127459 17142488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0775 63 457 Acyl Lipid Metabolism Gene Families AT3G13930 28.571 1.63e-37 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g0775 08 17127459 17142488 Mibi08g0775 08 17127459 17142488 ECH