LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi08g0774	ATGGAGACGCTATCTTTTGTTTCCAAAGCGAGAACTGCGCTTCATTCTGCGGCAGCGAAAGCCGAACGTGTTATATCGGACTTGAAATCTGATCGAGATCCTGATAAACAATCGCCCAACAACTTGACTAGCGAAGAAAAAGACGAATCTCCTCGGAATGAGGGCGAGTCAAAGCTGCACAGCGATTTCAAAAAGTGGAGACCTCCACACATCAGTATAAAGCAGGATTGGCAAGACAAAATAAAAAACATTCGGAAAGGGAGAAAGGAGGTTGAAGATACGGATAAAGATGGAGATACAGCAATGACTTTTCCATTGTATGATGAAAATCTATATGTCCTGAATATGAAAAATGATATTGAGGCTAAGGCGTCTGAAGCAACACCTACTGTTGAAGGCTTGATTGCTGCAACAAAAGATCTCATTCCTCCATCATCTGTGCTGAGGCAGTTGGCAGTAGCTGTGGAGGATGGGAAGAGAGCAAAGTCAGTTAAAGATTTTATTGCTTCATCAGTAAATTCTTCTCCTGCTGGAGACAAAGGGGGCTTAAGTCTCCAAGCAGTGAAGGCTCTAGTGCTGGGTGAAAAGGAGGAGAAACTTCTCATTGACTTTCGTAAAGATGAAAAACTTGGTTTTTTGGTTAATTCTCTGTTTGATCCAGAGAGAGAATTCCTCAAAAGGAAGATCGACTTGAATTCAGAGGAGAATTCTGCAGCATCTTTGGCAAGAGATATTCATGGTGCCCCTCCTGAAAGCATTGTTGTTAAGCTAGCTGAAATCATTGGAAACTTCAGAAGCCTTAAAAAAATGGCTTTGTTTTGGTGCAGGGTTGTTCTTGAACTGAATAAACTTTGGTCTGAGGAGCAACATATACCTGGAGTGCCCTTGGATGGGATTCCTGATCTGAAGTCATGTCTTCTATATCAACAGTTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCGCCGTTATATTGCCACTGAATCTCTTGACTTTTTGGTGGAAGGCAGTTCAAATACTAAAGAATTAATGGACCATAGCGGTAGCATTCCTAAGGCCCCTGTTTTATATGCTAGATTAAATACAGGGGAGCTTGCTCTTCGACTTGGTGCTGATCACCCGTCAGGGGATCTGACATTGCTAGAAACTGGCGAGCCTGTGTACTCCCCGGTTATGCAGGAAGGACCTTTGCTTACAGAAGATCTAATCAAGGAAAATGAGGAGTTTGTGCTGCGGACTGGGAGTGTTGGTGCTGGGTGCTCCCAACTTCTTTCAGATATGCAGGCTTTCAAGGCCGCCAACCCTGGTTGTATTTTGGAAGATTTTGTGAGATGGCACTCTCCTCCTGATTGGTCAGAATATGAACAAAATACTGATGCTAAAAATTCTTCTGATGGTGATGACTCTGGCGAGTCATTGTCCACCAGAGGTCAGCTAAGTCAGCGAATGCAAAAAGAAGGTAATTTGTGGCGCGAACTCTGGGCTACATCTAAACCTGTACCAGCTGTTAAACAGACACCACTTTTTGATGAGGATTTGGCAGTGGAGGGCATCCTACATGCTTTTGAGGACATTCAGCCTTCTGAACTTTTTAAACAATTGTTTGTTTCTTTGCTTGGTTTAGGAATTACAATAGCTGAGCCTTTGCTGTCTGGTAGCAGTGATTTCTCAAAGCTGTTCTCCGACTGCAAGGAGTATGTAGTTGTCAGCTTTCAAAGCAGTAATTGGAGTGAGAGACTTGATGAACTTTGCCAGGTATATCAAACCGTGGAAACTATGTTAACAAAACCTGAGGAAGCACTAATGATAATCAAGCAGGAAGAAGAATCACCTAAATCTAGCAGCGAAATGAAGCGTCGGCTGAAGAGGCTAAGCTTAATCTTTGGTGGCAAAGAGAAACCTTCGAGAAAACCTGGATCTGAAGACTCGATAGACTCCGAAGACAACCCGATTCGACAGTCCTTTTCAAGTTTCTTTGACAGCAAGTCATCTGTATTTTCAAAGAAATCTTCTAAAACTAAAGACATTCCCCTGGCAGGGAAATCTCACAGTCCTGAAAATAATCAGACAGTCGTTTCGGCGAAGTTCTAA	2094	0.4274	METLSFVSKARTALHSAAAKAERVISDLKSDRDPDKQSPNNLTSEEKDESPRNEGESKLHSDFKKWRPPHISIKQDWQDKIKNIRKGRKEVEDTDKDGDTAMTFPLYDENLYVLNMKNDIEAKASEATPTVEGLIAATKDLIPPSSVLRQLAVAVEDGKRAKSVKDFIASSVNSSPAGDKGGLSLQAVKALVLGEKEEKLLIDFRKDEKLGFLVNSLFDPEREFLKRKIDLNSEENSAASLARDIHGAPPESIVVKLAEIIGNFRSLKKMALFWCRVVLELNKLWSEEQHIPGVPLDGIPDLKSCLLYQQFQVINCCISRKRRRYIATESLDFLVEGSSNTKELMDHSGSIPKAPVLYARLNTGELALRLGADHPSGDLTLLETGEPVYSPVMQEGPLLTEDLIKENEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWSEYEQNTDAKNSSDGDDSGESLSTRGQLSQRMQKEGNLWRELWATSKPVPAVKQTPLFDEDLAVEGILHAFEDIQPSELFKQLFVSLLGLGITIAEPLLSGSSDFSKLFSDCKEYVVVSFQSSNWSERLDELCQVYQTVETMLTKPEEALMIIKQEEESPKSSSEMKRRLKRLSLIFGGKEKPSRKPGSEDSIDSEDNPIRQSFSSFFDSKSSVFSKKSSKTKDIPLAGKSHSPENNQTVVSAKF	697

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi08g0774	697	Pfam	Rab3 GTPase-activating protein catalytic subunit	368	524	IPR026147	-
	Mibi08g0774	697	Coils	Coil	74	94	-	-
	Mibi08g0774	697	PANTHER	RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT	17	675	IPR045700	GO:0005096\|GO:0043547
	Mibi08g0774	697	MobiDBLite	consensus disorder prediction	631	697	-	-
	Mibi08g0774	697	MobiDBLite	consensus disorder prediction	631	649	-	-
	Mibi08g0774	697	MobiDBLite	consensus disorder prediction	10	65	-	-
	Mibi08g0774	697	MobiDBLite	consensus disorder prediction	451	482	-	-
	Mibi08g0774	697	MobiDBLite	consensus disorder prediction	468	482	-	-
	Mibi08g0774	697	MobiDBLite	consensus disorder prediction	650	667	-	-
	Mibi08g0774	697	MobiDBLite	consensus disorder prediction	683	697	-	-
	Mibi08g0774	697	MobiDBLite	consensus disorder prediction	22	65	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi08g0774	Mibi-ChrMibi08	16983344	16990874	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi05g1704	05	20551647	20558348	Mibi08g0774	08	16983344	16990874	CCT
	Mibi08g0774	08	16983344	16990874	Mibi08g0774	08	16983344	16990874	ECH