Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi07g1884 | ATGGCATTTCACGTTGCTTGCCCAATTACATGTCGCCGAATCTGCTTCTGTTCGCTAGGGTTTCCTCGCGCACTTCATAAATCGAAGTCTAAGCATGAGTTCTTGGACGATGTGGCGAGAATTGACGAATTTTTCAATGACCCTTTTGGAATTAGGGCTTCTGAGAGGGAACCCACCGTGCAAATCGCTGTTCCTAAGGTCGTTCCGCCGCCGCCGCCGCCTCCTCCTCCGGCGGCCGCCGATGGGGTTTCCGCCGTCGTCGATGACGTGGACGAGGCCGTGTCGACGAAGGCTAAGAGGGTTGCTTTGCAGCGAAAAGGGGCTGCTGCTATGATTGCTGCTGAGGAGTATGCTCGTCAATTTGAGTCTGCTGATGCGGTGGATGCATCAGGAAATCTTGCTGGAGAAGAGCAGGGTAATTCGAATGTCAAAGTCTTTTGCCGAATGTGCAATCGTGTTGAAAATGAAGGAAGTGAAAGAGCTAAGAAAATGCTTTCATGCAAAAGTTGTGGCAAGAAGTACCATAGGAACTGCTTAAGAGGTTGGGCTCAACATAGAGATTTATTTCATTGGAGTTCATGGACATGTCGTGCTTGCCGAATTTGTGAGGCCTGTAGAAGGACAGGAGATCCAAGTAAGTTCATGTTTTGTAGAAGGTGTGATGGTGCTTATCATTGTTATTGTCTACATCCTCCTCACAAGAATGTTAGTTCTGGGCCTTATTTGTGCTCAAAACATACAAGGTGCCACAGCTGTGGATCCAATGTTCCTGGAAATGGTCTAAGTGTGAGGTGGTTTCTGGGATACACCTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAACTACTGTCCGGTTTGTCTGAAGGTGTATAGAGATTCAGAATCGACACCAATGGTTTGCTGTGATGTTTGCCAGCGTTGGGTGCACTGCCAGTGTGATAATATAAGTGATGAAAAATATCTTCAATTTCAAGTGGATGGGAATCTTCAGTATAAATGTCCAACATGTCGCGGGGAATGTTATCAGGTCAAGAATCTTGAGGATGCTGTTAAAGAACTTTGGAAGAGAAGAGATATTGCTGATAGGGATTTGATTGCCAGCTTGAGGGCTGCAGCTGGTTTACCAACTCAAGAAGAAATATTTTCTATTTCGCCTTATTCAGATGATGAGGATAGCGAGCCTGTAAAAGCGAAGAGTGAATCTGTGCGATCTTTTAAGTTCTCTCTGAAGAATTACTCTGATCACTCACCAAAGAAAGCAAAAGATTATGCAAAGAAATGTTCAAGTAAAAAGTCTGCCAAGAAAAAGGACTATCAGACTGGTAAAAATGATCTAAGTTTGGAAGGACATAGCGATGTGAAATCTGTGCATAGCTTGGATGATGATATCCAATCCCACAGACATGAAGTTCCCGATGTTTATTCTTCACCTGCTGGTGGGAGCTTGAGTCAAACTGAAGGTTATGCTAATCAGCCAGGAATATTGAAACAGAAGTTTGTAGACGAGGTGATGATCAGTGATGAAGAGAGAAGACCTAGAGTTGTTCGAATTAAGAGCAGTAAGGCTCAAACTCTTGATAGTGAAGAAGAGGCTGGAAAAAGTGGTGATAAGAATCAGAATGTGAAGGGAAAGAAGTTGGTTATAAATTTTGGGCCTCGGAAAATTAACATGACTAATTCTCCGCGGTCTGATACTTCAAGTTGCCAAAAAGATCAAGATCTTGTTAGCACTAATGGTAATGAAGATATTAGCCAATCAGGGAAAGGAGACAAGTTTATGTTAGACAGACATGATGGCACAATTAGAAATGCTGATGGTAAAGGAAACAAAGTTTATTCTCATCGATCAAAAGATTTAAAGGTTTCAGGAAGAGAAGGTAATTTGATAAAGCCTGCAAAAATTAAGCCAGAAGTTTCTGAATTGAACTCAGCCTCTGTTAGGAGCAATATTGTTGATGGAAGCGAATCTGGTCCCACAGAGCGACCTCGTATCTTATTTGGAAGGCGTCGCTCTGAAGGAATGACTGGTCAAGACGGAACAGTACAAACTGTGTCTCAAGGTGAGAGGATGGTTTTGGGGAAGCAGTCAGAAGGCAGGTCTGATGCATATGATGATACAGATGACAACACTAATCATACACCATCACATTCTTTGCCAAAAGACTCTAAACCTTTATTGAGATTGAAATTTAAGAAACCTAGCATTGAAAGTCAAAATTCTATTAATCGTGAGGATGAGAAGATTACAATCAAGGGGCAGAGGTCAAAAAGGAAGAGGCCTTCACCTTTTGTGGAGAAAGTGTCGAAAAATGGGGATGAGGATGCAGCACAATCTCATCAAGATGGTCCAATGGATGAAATCATGGAGGCTAATTGGATATTGATGAAATTGGGTAAAGATGCCATTGGAAAGAGAGTTGAAGTTCATCAGACATCTGACAATTCTTGGCACAAGGGGTCAGTCACTAATGTAATTGAAGGATCTTCAAAGATATCTGTTACCTTAGAGGATGGCAAGGTGAAGACATTGGAGCTTCGTAAGCAAGGAGTCCGTTTCATTCCTCAAAAGCAAAAGAGATCAAAAGCTTGA | 2595 | 0.4254 | MAFHVACPITCRRICFCSLGFPRALHKSKSKHEFLDDVARIDEFFNDPFGIRASEREPTVQIAVPKVVPPPPPPPPPAAADGVSAVVDDVDEAVSTKAKRVALQRKGAAAMIAAEEYARQFESADAVDASGNLAGEEQGNSNVKVFCRMCNRVENEGSERAKKMLSCKSCGKKYHRNCLRGWAQHRDLFHWSSWTCRACRICEACRRTGDPSKFMFCRRCDGAYHCYCLHPPHKNVSSGPYLCSKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDNISDEKYLQFQVDGNLQYKCPTCRGECYQVKNLEDAVKELWKRRDIADRDLIASLRAAAGLPTQEEIFSISPYSDDEDSEPVKAKSESVRSFKFSLKNYSDHSPKKAKDYAKKCSSKKSAKKKDYQTGKNDLSLEGHSDVKSVHSLDDDIQSHRHEVPDVYSSPAGGSLSQTEGYANQPGILKQKFVDEVMISDEERRPRVVRIKSSKAQTLDSEEEAGKSGDKNQNVKGKKLVINFGPRKINMTNSPRSDTSSCQKDQDLVSTNGNEDISQSGKGDKFMLDRHDGTIRNADGKGNKVYSHRSKDLKVSGREGNLIKPAKIKPEVSELNSASVRSNIVDGSESGPTERPRILFGRRRSEGMTGQDGTVQTVSQGERMVLGKQSEGRSDAYDDTDDNTNHTPSHSLPKDSKPLLRLKFKKPSIESQNSINREDEKITIKGQRSKRKRPSPFVEKVSKNGDEDAAQSHQDGPMDEIMEANWILMKLGKDAIGKRVEVHQTSDNSWHKGSVTNVIEGSSKISVTLEDGKVKTLELRKQGVRFIPQKQKRSKA | 864 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi07g1884 | 864 | FunFam | PHD finger family protein | 279 | 341 | - | - | |
| Mibi07g1884 | 864 | SUPERFAMILY | FYVE/PHD zinc finger | 137 | 202 | IPR011011 | - | |
| Mibi07g1884 | 864 | CDD | PHD_SF | 146 | 199 | - | - | |
| Mibi07g1884 | 864 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 139 | 256 | IPR013083 | - | |
| Mibi07g1884 | 864 | SUPERFAMILY | FYVE/PHD zinc finger | 191 | 252 | IPR011011 | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 590 | 626 | - | - | |
| Mibi07g1884 | 864 | ProSiteProfiles | Zinc finger PHD-type profile. | 144 | 202 | IPR019787 | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 555 | 587 | - | - | |
| Mibi07g1884 | 864 | ProSitePatterns | Zinc finger PHD-type signature. | 147 | 199 | IPR019786 | - | |
| Mibi07g1884 | 864 | SUPERFAMILY | FYVE/PHD zinc finger | 282 | 340 | IPR011011 | - | |
| Mibi07g1884 | 864 | ProSiteProfiles | Zinc finger PHD-type profile. | 282 | 341 | IPR019787 | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 740 | 782 | - | - | |
| Mibi07g1884 | 864 | FunFam | PHD finger family protein | 141 | 256 | - | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 516 | 626 | - | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 472 | 491 | - | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 696 | 713 | - | - | |
| Mibi07g1884 | 864 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 279 | 341 | IPR013083 | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 643 | 657 | - | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 677 | 692 | - | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 516 | 542 | - | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 415 | 455 | - | - | |
| Mibi07g1884 | 864 | MobiDBLite | consensus disorder prediction | 642 | 788 | - | - | |
| Mibi07g1884 | 864 | SMART | PHD_3 | 146 | 200 | IPR001965 | - | |
| Mibi07g1884 | 864 | SMART | PHD_3 | 201 | 247 | IPR001965 | - | |
| Mibi07g1884 | 864 | SMART | PHD_3 | 284 | 339 | IPR001965 | - | |
| Mibi07g1884 | 864 | PANTHER | HL01030P-RELATED | 95 | 527 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mibi07g1884 | 07 | 39540036 | 39548338 | Mibi07g1884 | 07 | 39540036 | 39548338 | ECH |