Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1317 ATGTCCATTTTTTGTACATATCACTGCAATTTTCTCTCCGCTGAATTTTCTAGGTTGTGGGTGCGATTGTTCGTTGTGGGGTTGTTACATTTTGAAAGGGTTGTGAAAAACAAGGGACAGATGAGTGATAATTTGATGGAAAAAGTCAGCGCTTTAGGGGAGCGCCTGAAAATTGGTGGGTCTGAGGTGGGTAGAAAGATGAGTGAAGGAATGAGTTCTATGAGCTTCAAGATGAGGGAATTTTTTCAGGGTCCAAGTGAGAATGATAAGCTTGTTGATGATGCTACATCTGAGGCACTTGATGAGCCTGATTGGGCTATGAATCTTGAGCTTTGTGATATGATCAATAATGAGCAGGTCAATAGTGTGGAATTGATCCGTTCGATCAAGAGACGGATCATGATTAAGAGTGCTAAGGTTCAGTACTTGGCTATGGTTTTGCTTGAAACATGTGTAAAAAATTGTGAAAGGGCCTTCTCAGAAGTGGCTGCAGAGAAAGTCCTTGATGAAATGGTTAGGCTTATTGATGACCCTCAGACTGTTGTGAATAACCGTAACAAGGCCTTAACACTCATTGAAGCATGGGGGGAGTCAACCGGTGAGCTTCGCTTTTTGCCTGTGTATGAAGAAACTTACAAGAGTTTGAAGTCAAGAGGTATTCGATTCCCTGGTCGTGACAATGAAAGTTTGGCACCTATTTTTACTCCTCCTCGTTCAGTGACTGCTTCGGAAGTTGATGTTGATCAGTCTGGACAGATTCAGCATGATATTACTGTGCAGACTTTCACACCTGAGCAAACAAAGGAGGCTTTTGATGTTTCCAGAAATAGCATTGAGCTTCTTTCTACTGTTCTATCTTCTTCACCTGAACAGGATGTTTTACAGGATGATTTGTCCACTACTCTTGTACAACAGTGTCGTCAAGCTCAACGTACTGTACAGAGAATCGTCGAGACTGCTGGAGATGATGAGGCGCTTCTTTTTGAGGCCTTGAATATCAATGATGAGATTCAGAAGGTTCTCACCAAGTATGAAGAGTTGAATAAGTCTTCTGCTGTTGCTCCTCCTCCTCTTAGGCAGGAACCTGCTATGATACCTGTTGCCATTGAGCCAGACGAATCGCCTCTTAGTTCTCAAGAAGATGCCTTGATTAGAAAGCCAGCTAGTTCAAGAGCTGGCAGTCAAGGAGGGAACAATGATGATATGATGGATGATCTGGATGAGATGATATTTGGCAAAAAGGGTGGGGATGCATCACCAAATGCAAACCAAGATCCAAAGAAGCAGCAGTCTTCTAAAGATTCATCACCAAAGGCAAGCCAAGATCCAAAGAAAAAGCAGTCTTCTAAAGATACGTCACCAAAGGCAAGCCAAGATCCAAAGAAGAAGCAGTCATCTAAAGATGATGATCTTATTTCATTCTAA 1425 0.4232 MSIFCTYHCNFLSAEFSRLWVRLFVVGLLHFERVVKNKGQMSDNLMEKVSALGERLKIGGSEVGRKMSEGMSSMSFKMREFFQGPSENDKLVDDATSEALDEPDWAMNLELCDMINNEQVNSVELIRSIKRRIMIKSAKVQYLAMVLLETCVKNCERAFSEVAAEKVLDEMVRLIDDPQTVVNNRNKALTLIEAWGESTGELRFLPVYEETYKSLKSRGIRFPGRDNESLAPIFTPPRSVTASEVDVDQSGQIQHDITVQTFTPEQTKEAFDVSRNSIELLSTVLSSSPEQDVLQDDLSTTLVQQCRQAQRTVQRIVETAGDDEALLFEALNINDEIQKVLTKYEELNKSSAVAPPPLRQEPAMIPVAIEPDESPLSSQEDALIRKPASSRAGSQGGNNDDMMDDLDEMIFGKKGGDASPNANQDPKKQQSSKDSSPKASQDPKKKQSSKDTSPKASQDPKKKQSSKDDDLISF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1317 474 Gene3D - 258 351 IPR038425 -
Mibi07g1317 474 PANTHER TOM1-LIKE PROTEIN 1 41 435 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mibi07g1317 474 Pfam GAT domain 275 349 IPR004152 GO:0035091|GO:0043130
Mibi07g1317 474 ProSiteProfiles GAT domain profile. 262 349 IPR004152 GO:0035091|GO:0043130
Mibi07g1317 474 MobiDBLite consensus disorder prediction 438 474 - -
Mibi07g1317 474 CDD GAT_GGA_like_plant 271 347 - -
Mibi07g1317 474 Pfam VHS domain 88 219 IPR002014 GO:0035091|GO:0043130
Mibi07g1317 474 SMART VHS_2 88 219 IPR002014 GO:0035091|GO:0043130
Mibi07g1317 474 SUPERFAMILY GAT-like domain 220 349 - -
Mibi07g1317 474 Gene3D - 83 240 IPR008942 -
Mibi07g1317 474 SUPERFAMILY ENTH/VHS domain 81 223 IPR008942 -
Mibi07g1317 474 Coils Coil 330 350 - -
Mibi07g1317 474 PIRSF TOM1 72 473 IPR014645 -
Mibi07g1317 474 MobiDBLite consensus disorder prediction 422 437 - -
Mibi07g1317 474 ProSiteProfiles VHS domain profile. 95 223 IPR002014 GO:0035091|GO:0043130
Mibi07g1317 474 FunFam TOM1-like protein 2 81 240 - -
Mibi07g1317 474 CDD VHS 89 217 - -
Mibi07g1317 474 MobiDBLite consensus disorder prediction 372 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1317 Mibi-ChrMibi07 21354574 21365470 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g1317 07 21354574 21365470 Mibi07g1317 07 21354574 21365470 ECH