Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1089 ATGGCGAGCAAACCCTTAGAGAGGGCAATATCTATTGATGAACAGCTTCGTCAATTGGTTCCAGCCAAAGTGAGTGAGGATGATAAACTCGTTGAGTACGATGCTTTACTCTTTGATAAATTCCTCCACATCCTCAATGATTTACATGGCCAACGTCTCACCCAAACGGTGCAAGAAGCATACGAGCTATCAGCAGAGTACGAAAGAAATCAAGAGGCCAAAAAACTAGAGGAACTGGGAAAATTGATAACAAGTTTGGACGCGGGAGATTCCATTGTGGTGGCCAAATCATTTTCAAACATGCTTAATTTGGCTAACTTGGCAGAGGAAGTTCAGATTGCTCACCGAAGAAGGAATAAACTGAAGAAGGGAAATTTTTGTGACGAAAATAGTGCCACCACCGAATCTAACATCGAGGAGACTTTCCGGAAACTCGTCATCGAGATGAAGAAGTCACCGGAAGAGATTTTTGAAGAGCTGAAGAATCAGACTGTGGATCTTGTCCTCACTGCTCATCCCACCCAATCTGTTCGTAGATCTTTGCTACAGAAATATTCAAGGATAAGGGATTATTTAACTCAGTATTACGCCACAGATTCTCCTGATGATAAGCAGGAGCTTGGTGATGCCTTACAGAGGGAGATCCATGCAGCGTTTCGTACAGATGAAATAAGGAGAACGCCTCCAACTCCACAGGATGAGATGAGAGCAGGAATGAGCTACTTTTATGAGACAATATGGACGGGTGTTCCCAGTTTTCTACGCAGAGTTGATACTGCTTTGAACAACATTGGCATTAAACAACGTGTTCCTTATGATGCCCCTCTTATTCAATTCTCTTCTTGGATGGGTGGTGACCGTGATGGTAATCCAAGGGTGACCCCTGAAGTGACTAGGGATGTTTGCTTATTGGCTAGAATGATGGCTGCAAATTTGTATTATTCCCAAATTGAGGATCTTATGTTTGAGCTATCAATGTGGCGCTGCAACGAGGAGTTGCGTGTTCGTGCAGATGAAATTCACAGATCAGCCAAGAAGGATGATGTTGCAAAACACTATAAAGAGTTCTGGAAAAGAGTTCCATTACATGAACCATATCGTGTAATTCTGGGAAACGTAAGGGACAGAATTTACCATACTCGTGAACGTGCTCGCCATTTGCTATCTCGAGGTCACTCTGACATTCCTGAAGAATTAACTTACAACACTGTTCAAGAGTTCATGCAACCTCTAGAACTATGTTACCGATCACTATGTGACTGTGGAGACAGAGCCATAGCAGAAGGAAGCCTCCTTGATTTCCTAAGACAAATCACAACATTTGGACTATCAATAGTAAAACTAGACATCCGACAAGAATCAGATCGCCATAGTGACGTTATGGACACCATTACAAAACACTTAGGAATAGGATCATACCATGATTGGTCAGAACACAAAAGACAACAATGGCTCCTCTCCGAATTAACCGCGAAACGTCCTTTATTCGGACCGGACCTCCCTCAAACCGAGGAAATCAAAGACGTCCTCAACACTTTCCATGTCATTGCCGACCTCCCTCCGGGGTCCTTCGGCGCCTACATCATCTCCATGGCAACATCACCGTCCGACGTCCTAGCCGTCGAGCTACTAATGAAACAATTTCAAGTCAAGCTTCTCTTGCGAGTTGTCCCATTATTCGAACGACTCGATGACCTTGTCGCCTCCCCGGCGGCATTATCAAGGTTGTTCTCGTTGGATTGGTACCGAAATCGGATCGCCGGGAAACAAGAGGTCATGATTGGGTACTCGGACTCCGGTAAGGATGCCGGGAGGTTCACGGCAGCGTGGCAGTTGTATAAGGCACAAGAGGAGTTGATAAAGGTGGCGAAAGAGTATGGGATTAAGTTGACTATGTTTCATGGTCGGGGTGGGACAGTTGGCCGGGGAGGCGGGCCGACACATTTGGCGATATTGTCGCAGCCACCGGAGACTATACATGGGTCGTTAAGGGTGACGGTGCAAGGGGAAGTGATAGAGCAATCGTTTGGGGAGAAGAATTTGTGTTTTAGGACACTTCAACGTTACACGGCGGCTACTTTAGAACATGGTATGCATCCTCTTATTTCGCCTAAACATGAATGGAGATGTCTTATGGATGAAATGGCTGCCATTGCTACTGAGGAATATAGGTCGATTGTGTTTAAGGAACCTCGTTTTGTTGAGTATTTTCGCTTGGCAACACCAGAGTTGGAGTATGGAAGAATGAACATAGGAAGCAGACCAGCAAAGAGAAAACCAAGTGGAGGGATAGAATCACTAAGGGCAATCCCATGGATATTTGCATGGACACAGACAAGATTTCATCTACCAGTGTGGTTGGGATTTGGGGAGGCATTCAAGCAAGTGATAGCCAAGGACGAAAACAATCTGAAGATGCTGCAAGAAATGTACAATCAATGGCCATTCTTCAGAGTGACCATAGATTTGGTTGAAATGGTGTTCGCCAAAGGAGACCCAGGCATTGCAGCTCTGTATGATAAGCTTCTTGTGTCTCCTGAGTTGTTGCCATTTGGTGAGCAGTTGAGGGCCAAGTATGAAGAAACCAAGAAATTCCTCCTTCTGGTGGCTGGGCACAAGGAAGTTCTAGAGGGGAATCCGTACTTGAGGCAGAGACTGAGATTGAGAGACTCATACATAACAACAATAAATGTGTTTCAAGCATACACATTGAAGAGTGTGAGAGATCCAAATTATGCAAAGAAGGAGCGTCCTCAGATATGTTCATCATCAAAAGACTCTGTGAGTAAAGCTGCTGATGAGCTTGTTGCACTCAACCCCACAAGTGAATATGCTCCTGGTTTGGAAGATACACTCATTCTCACCATGAAGGGTATTGCTGCTGGCATGCAAAACACTGGTTAA 2904 0.449 MASKPLERAISIDEQLRQLVPAKVSEDDKLVEYDALLFDKFLHILNDLHGQRLTQTVQEAYELSAEYERNQEAKKLEELGKLITSLDAGDSIVVAKSFSNMLNLANLAEEVQIAHRRRNKLKKGNFCDENSATTESNIEETFRKLVIEMKKSPEEIFEELKNQTVDLVLTAHPTQSVRRSLLQKYSRIRDYLTQYYATDSPDDKQELGDALQREIHAAFRTDEIRRTPPTPQDEMRAGMSYFYETIWTGVPSFLRRVDTALNNIGIKQRVPYDAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNEELRVRADEIHRSAKKDDVAKHYKEFWKRVPLHEPYRVILGNVRDRIYHTRERARHLLSRGHSDIPEELTYNTVQEFMQPLELCYRSLCDCGDRAIAEGSLLDFLRQITTFGLSIVKLDIRQESDRHSDVMDTITKHLGIGSYHDWSEHKRQQWLLSELTAKRPLFGPDLPQTEEIKDVLNTFHVIADLPPGSFGAYIISMATSPSDVLAVELLMKQFQVKLLLRVVPLFERLDDLVASPAALSRLFSLDWYRNRIAGKQEVMIGYSDSGKDAGRFTAAWQLYKAQEELIKVAKEYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEKNLCFRTLQRYTAATLEHGMHPLISPKHEWRCLMDEMAAIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGEAFKQVIAKDENNLKMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSPELLPFGEQLRAKYEETKKFLLLVAGHKEVLEGNPYLRQRLRLRDSYITTINVFQAYTLKSVRDPNYAKKERPQICSSSKDSVSKAADELVALNPTSEYAPGLEDTLILTMKGIAAGMQNTG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1089 967 Gene3D Phosphoenolpyruvate/pyruvate domain 307 444 - -
Mibi07g1089 967 Pfam Phosphoenolpyruvate carboxylase 38 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 Coils Coil 104 124 - -
Mibi07g1089 967 FunFam Phosphoenolpyruvate carboxylase 1 307 444 - -
Mibi07g1089 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 24 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Mibi07g1089 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Mibi07g1089 967 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 PRINTS Phosphoenolpyruvate carboxylase signature 279 294 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 PRINTS Phosphoenolpyruvate carboxylase signature 219 235 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 967 IPR022805 GO:0006099|GO:0008964|GO:0015977
Mibi07g1089 967 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 34 967 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1089 Mibi-ChrMibi07 15098288 15107258 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0718 01 6872247 6877481 Mibi07g1089 07 15098288 15107258 CCT
Mibi07g1089 07 15098288 15107258 Mibi01g0521 01 4870740 4875219 CCT