Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1075 ATGGTGAATCCGTCGTCGGTGATCCGATGTTTACGCTCAGCCGTGGGTGGTGGCCGCTCTCATCTCTCTCACCGCCGGTACTCCTCCGATGCAATCCCTCAACGGAAAGTGGCCATACTCGGAGCCGCCGGCGGCATTGGTCAGCCATTATCAATGTTGATGAAGCTCAATCCCCATGTCTCAACTCTCTCCCTTTACGACCTCGCCGCAACCCCAGGTGTCGCCGCCGATGTCAGCCACGTCAACACCAGACCTCAGGTTGCTGGATACCAAGGTGAAGATGAGCTTGGGAAGGCCTTGGAAGGATCAGATGTTGTTATTATTCCTGCAGGTGTGCCCAGAAAGCCTGGAATGACACGTGACGATCTTTTTAACATTAATGCTGGCATCGTCAAATCACTCTGCTCTGCTGTTGCCATGTACTGTCCTAACGCACTTGTTAACATAATAAGCAATCCTGTGAATTCCACTGTTCCAATTGCTGCTGAGGTTTTTAAGAAGGCAGGCACTTACGATGAAAAGAAGTTGTTTGGGGTTACTACCCTTGACGTTGTGAGGGCAAAAACTTTCTATGCTGGGAAGGCAAAAGTTCCGGTTGCTGAGGTTAATGTGCCTGTCGTAGGTGGTCATGCAGGCATTACTATTCTCCCACTATTTTCTCAAGCATCACCAAAAGCCAATCTAGGAGATCATGATATTAAGGCCCTGACAAAACGAACACAAGATGGAGGAACAGAGGTTGTGGAAGCAAAGGCAGGAAAGGGTTCTGCAACACTGTCAATGGCCTATGCTGGAGCACTTTTTGCTGATGCTTGCCTCAAAGGACTTAATGGGGTCCCAGATGTAGTGGAGTGCTCATTTGTGCAATCCAATGTCACTGAGCTGCCTTTCTTCTCTTCTAAGGTGAGGCTTGGGAAGAATGGCGTGGAGGAAGTTCTGGGCTTGGGTCCTCTTTCAGATTATGAACAACAAGGCTTGGACAGCCTTAAGTCTGAACTCAAAGCTTCTATTGAGAAAGGAATCAACTTTGCCAACAATAGTTAG 1044 0.4856 MVNPSSVIRCLRSAVGGGRSHLSHRRYSSDAIPQRKVAILGAAGGIGQPLSMLMKLNPHVSTLSLYDLAATPGVAADVSHVNTRPQVAGYQGEDELGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCSAVAMYCPNALVNIISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKAKVPVAEVNVPVVGGHAGITILPLFSQASPKANLGDHDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVVECSFVQSNVTELPFFSSKVRLGKNGVEEVLGLGPLSDYEQQGLDSLKSELKASIEKGINFANNS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1075 347 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 36 345 IPR010097 GO:0006099|GO:0030060
Mibi07g1075 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 178 IPR036291 -
Mibi07g1075 347 Pfam lactate/malate dehydrogenase, NAD binding domain 36 178 IPR001236 GO:0016491
Mibi07g1075 347 ProSitePatterns Malate dehydrogenase active site signature. 179 191 IPR001252 GO:0006108|GO:0016615
Mibi07g1075 347 PANTHER MALATE AND LACTATE DEHYDROGENASE 25 346 - -
Mibi07g1075 347 FunFam Malate dehydrogenase 33 179 - -
Mibi07g1075 347 FunFam Malate dehydrogenase 180 346 - -
Mibi07g1075 347 PIRSF Lac_mal_DH 32 346 IPR001557 GO:0016616|GO:0019752
Mibi07g1075 347 Gene3D - 180 346 IPR015955 GO:0003824|GO:0016616
Mibi07g1075 347 SUPERFAMILY LDH C-terminal domain-like 179 345 IPR015955 GO:0003824|GO:0016616
Mibi07g1075 347 Gene3D - 34 179 - -
Mibi07g1075 347 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 180 343 IPR022383 GO:0016616
Mibi07g1075 347 CDD MDH_glyoxysomal_mitochondrial 36 344 IPR010097 GO:0006099|GO:0030060
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1075 Mibi-ChrMibi07 14902447 14906122 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g1075 07 14902447 14906122 Mibi07g1075 07 14902447 14906122 ECH