Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0886 ATGTGTAAAAACCTCATTCTCAAACATTTTATTGCGGAATATTCATCTAATTCAGTATCTAAGAAGATTTCTTCTTTGTTGTGCAGTAACTAATTTGATGGAGCACAGAAGAAACTTTCAAGAGGTCAAACTCGCCACTCTTCAAAAATGGGATCCTCTCAAGCCTTGTCCATCTCTGAAGATGATTTTTCGGAACTTGACAGCGAGCATAGTCTTTCTAGCCGTGAAGCACTTGACTTTGTGCAACCCTCTGTTTCAGCATCGCCTCCAGATGAGAATCCCAGTTCAGTTTCAAGATTGGGTTACTATGAAATGATGCTATGGCTTAGAGTTGATAACAAAGAAAAGATTCAGGATCTTTGCAACTCTATTGCAGTCAATGATGGTATAGACTCTTCTGGTTTAGGAGAAAGTTATTTATTGGCATTTTCTGAAAGTGATTGGAAGGAGGGGCTTTTACAGCTGTTGGAAACTATAGACATAACAAAGCTTCCATCTACAGAATCTGTAGCAAGTATTTTTAAATCATTGGGAAGGCAATCCTTGGACTCCTTTGCAGAAAAGTTCCTCTCAGCTTTCAAAATATGTGATGATGAAGCAAATAATGTTACAAACTTCATTGCCAGTTATGCCATTAACCTACCACATTTAGCGGTTGAGGATGTCGTCTTGAAGTTCAAGGATTTGCACCAAAAACTGGAAGTTTCACCTTCATCCTCATCTTACGAGAAGCTCATTAAACATGCATGTGACTCACTTGAGGTGCATTTAGCTCTTAAGATTGTCTGTGAAATGTGTGAAGCAGGCTTTACCTTTTCTACTGAGGTGTTAAACTCCATATTGCGAAGTGTTGAAGAAACATGTGAATATAATTTGGTCCACTGGATCTATTCCATAGTATCTCACTACAGTTTGAAGGCAAACTGTGAAACATTCAGTCGTATGATATACTTGTGCACCAGGATGAAAGATTTTGAGAGTGCAGATAAGATGCTTGGTGATTTGGAAGGAATGAATTTGAAGCCTACGTCTAGCATGTACAATGCTATTATGGCTGGATATTTTAGAGAGAAAAACATTGATGACGCTTTGAGGGTGTTTGAGCGCATGAAAGATGCAAATATCAAGCCTGATTCAACTACTTACAACTATTTGATTGGCAACTCTAAAACTGAAGAGGATATAATTAAGTATTATGAAGAAATGAGGCAGTCTTACTGCCAACCTACAAAGCAGACTTTTGTGGCCCTTATAACTGCTTATGCAGCCTGTGGACAGTTGGAGAAGGCAAAACAGGTGGTCTCAGATCCAGACATTCCTGCAAAGAGCTTAAATGAAATCAAATCTGCTCTTCTCTCAACTCTGGCATCACATGGGCAATTGTCGGATTCTATTCATATTTACGATGAAATCAAGGAATCTGGAAACAATCTGGAGCAAAAAGCTGTTATAAGTCTTATTGAGGGCCACATCAAATCTGATGGGGAGTTGGATAGACTGTTTCTGCTACTAGAAGAATTGACTGATCCAGACTATTGGGTAGATGGTTGCTTTAGAATTATTATGTTCTGTGTTGAGAACGAGCATTTAAGTGCTGCTGTTGATTTGATCAAGCAACTCAATGGTAAAATTCAGGATAATGAGCTACTCATGGAAGTTCTTTTGGATCAGGTGTTTTCTACAATTGCATCATCAGAGTCCACGCATTTGAAGTTTGGCCTAGACCTTTATTGGCTGATCAGGAAAGTGCTTGGCATTGTGCCTTCACGGCAATGTCTGGACTTTCTTCTAACTGCTTGTGCCAATGCCAAAGATTTGCAAAACATTCGTAAAATTTGGAAAGAATACCAGATTGCTGGATACCCTTTTAATGTTTTAAGTTATGTGAGGATGTATCGAGCTCTTTTGGTTGCAGGAGATCATAATTCTGCCAAACTTGTGCTCAAGAAAATTCCAAGAAATGATCCCGATGTTAATCGTGTCGTCAAACAATGTCAAAAAACACATGATGATCTTGCCTTGGAGAAACTAACCAAGAAAATGGATAGAAGAGAAAAGGAGGAAGATTTATTTGACTCTCATTAA 2085 0.3856 MCKNLILKHFIAEYSSNSVSKKISSLLCSNXFDGAQKKLSRGQTRHSSKMGSSQALSISEDDFSELDSEHSLSSREALDFVQPSVSASPPDENPSSVSRLGYYEMMLWLRVDNKEKIQDLCNSIAVNDGIDSSGLGESYLLAFSESDWKEGLLQLLETIDITKLPSTESVASIFKSLGRQSLDSFAEKFLSAFKICDDEANNVTNFIASYAINLPHLAVEDVVLKFKDLHQKLEVSPSSSSYEKLIKHACDSLEVHLALKIVCEMCEAGFTFSTEVLNSILRSVEETCEYNLVHWIYSIVSHYSLKANCETFSRMIYLCTRMKDFESADKMLGDLEGMNLKPTSSMYNAIMAGYFREKNIDDALRVFERMKDANIKPDSTTYNYLIGNSKTEEDIIKYYEEMRQSYCQPTKQTFVALITAYAACGQLEKAKQVVSDPDIPAKSLNEIKSALLSTLASHGQLSDSIHIYDEIKESGNNLEQKAVISLIEGHIKSDGELDRLFLLLEELTDPDYWVDGCFRIIMFCVENEHLSAAVDLIKQLNGKIQDNELLMEVLLDQVFSTIASSESTHLKFGLDLYWLIRKVLGIVPSRQCLDFLLTACANAKDLQNIRKIWKEYQIAGYPFNVLSYVRMYRALLVAGDHNSAKLVLKKIPRNDPDVNRVVKQCQKTHDDLALEKLTKKMDRREKEEDLFDSH 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0886 694 TIGRFAM PPR: pentatricopeptide repeat domain 346 379 IPR002885 -
Mibi07g0886 694 Coils Coil 537 557 - -
Mibi07g0886 694 Gene3D Tetratricopeptide repeat domain 289 390 IPR011990 GO:0005515
Mibi07g0886 694 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 343 377 IPR002885 -
Mibi07g0886 694 PANTHER OS02G0132600 PROTEIN 91 681 - -
Mibi07g0886 694 Pfam PPR repeat family 342 386 IPR002885 -
Mibi07g0886 694 Pfam PPR repeat 413 434 IPR002885 -
Mibi07g0886 694 Gene3D Tetratricopeptide repeat domain 518 693 IPR011990 GO:0005515
Mibi07g0886 694 Gene3D Tetratricopeptide repeat domain 391 514 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0886 Mibi-ChrMibi07 11489667 11501188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0886 236 653 Glycosyltransferase AT1G05670 19.178 2.21e-14 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0886 07 11489667 11501188 Mibi07g0886 07 11489667 11501188 ECH