Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0716 ATGATCTTGTCAGAGAGATCTAAGTGCCCAAATCAGAGCAAAAAGGGTATCTTGGAATCTCTCCAATCTCCTAAATCTCGCTGCTCTTCGCCGTCGTTTATATTCAGAAGAATGGTGGCAGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGTTTCGTGTGTGGTTTTCATATACATGTCTTTTGGAGACTTGAGGCCGAGTTTAAGGGAAGAAGTGAGGATGTCTTTTGTGAAGAGAAATGGGACTCAGTTAATGTTAGATGGCAGACCTTTCTACATCAATGGGTGGAACTCTTACTGGTTTATGGTTAAGTCTGTGGACGAATCTTCCAGAAGCAGGGTTCGTGCGATGCTTCAAACTGGTGCGAAGATGGGTCTTACTGTTTGTAGAACTTGGGCTTTTAATGATGGAGACTACAATGCCCTTCAGATTTCCCCAGGTCGGTTTGATGAGCGAGTTTTCCAGGCCTTGGATTATGTCATAGCAGAAGCAAGGCAACAAGGAATTCGGCTGCTCCTTGCCTTGGTGAACAACTTGCACGCCTATGGTGGGAAGACTCAGTATGTCAAATGGGCATGGGAAGAAGGGATAGGGTTAAGCTCATCCAATGACTCTTTCTTTTATGATCCATCGATACGCAGTTATTTCAAGAATTATGTCAAGACTGTTCTGACAAGGAAGAATACTATCACTGGAGTTGAATATAGAAATGATCCCACCATATTAGGCTGGGAATTAATTAATGAACCTCGTTGCATGACTGATCCTTCGGGTGACACTCTCCAAGACTGGCTTGAAGAAATGTCTGCTTTTGTCAAATTGATAGACAAGAACCATTTGGTGACTATTGGCCTTGAAGGATTTTATGGTCCCAATGACCCAAAAGGCCCTATTGTCAACCCAGAGGAGTGGGCATCCAGACTTGGATCTGATTTTATTCGCAATTCTGGGATTGCAAATATCGATTTCACCTCTGTTCATATCTATCCTGACCACTGGTTAAAAACGTATGACTTTGAAGTGAACCTGCGTTTTGTCTCCAAGTGGATGCAATCACACATCGAAGACGGCGACAAAGAATTGAAGAAGCCTGTTTTGTTCTCTGAATATGGGTGGTCAGACTTGATCAAGAACTTTTCTGTATCTGACCGTGAAAGGATGTACAGAACAATTTTGGACATAATGTACAAATCTGCTAAGAAAAACAGGTCCGGAGCAGGTGCCTTGGTGTGGCAATTCTTATTGGAAGGAATGAACGACTTGGAGGATGATTTCTGGATGATCCCAACGAAAGGATCATCCACTTATTCTCTATTTCTTGGACAATCATGCAGATTGTCCAAAGTCATAGGATGGACTGCACAACAGGACAGAAGTTTCAAAGAGGCATGTAAGAAAATCTGA 1407 0.425 MILSERSKCPNQSKKGILESLQSPKSRCSSPSFIFRRMVAGNGLFYPILGFVSCVVFIYMSFGDLRPSLREEVRMSFVKRNGTQLMLDGRPFYINGWNSYWFMVKSVDESSRSRVRAMLQTGAKMGLTVCRTWAFNDGDYNALQISPGRFDERVFQALDYVIAEARQQGIRLLLALVNNLHAYGGKTQYVKWAWEEGIGLSSSNDSFFYDPSIRSYFKNYVKTVLTRKNTITGVEYRNDPTILGWELINEPRCMTDPSGDTLQDWLEEMSAFVKLIDKNHLVTIGLEGFYGPNDPKGPIVNPEEWASRLGSDFIRNSGIANIDFTSVHIYPDHWLKTYDFEVNLRFVSKWMQSHIEDGDKELKKPVLFSEYGWSDLIKNFSVSDRERMYRTILDIMYKSAKKNRSGAGALVWQFLLEGMNDLEDDFWMIPTKGSSTYSLFLGQSCRLSKVIGWTAQQDRSFKEACKKI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0716 468 SUPERFAMILY (Trans)glycosidases 76 440 IPR017853 -
Mibi07g0716 468 ProSitePatterns Glycosyl hydrolases family 5 signature. 243 252 IPR018087 GO:0004553|GO:0005975
Mibi07g0716 468 Pfam Cellulase (glycosyl hydrolase family 5) 89 413 IPR001547 GO:0004553|GO:0071704
Mibi07g0716 468 Gene3D Glycosidases 73 451 - -
Mibi07g0716 468 FunFam Mannan endo-1,4-beta-mannosidase 6 74 451 - -
Mibi07g0716 468 PANTHER - 46 461 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0716 Mibi-ChrMibi07 8816980 8821258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0716 40 452 Glycoside Hydrolase AT2G20680 68.765 0.0 616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0716 07 8816980 8821258 Mibi07g0716 07 8816980 8821258 ECH