Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0559 ATGGAGTACAGATACAAGATGCGAGTGGCGTTTGCGATCGCTGCTTTAGCGATTGTTTCAATTTACTTTACTTCTCGGTATAGGAGTCGGCGTAAGAAGAAGTATCCACCGAGTTTGTGTTACTTACATTCAGACTCAAAGCCACAATATGGATTTAAGCGAGTATTAGCCGATAATTCCTACACCGTGTTCAAGCACTTGAAGGTCGATAACTCTGATCATGAGAGGCCTTCAAATTCCCATCCTTTTGAAGCAGAGATTACACTACTATGTGAAGACCCTCAGCCTCAATTACAATTCAGCACTGAGATTGAGGAACTGAAGAAGAAAGATACATATGTTTGGATTGATACAGAGTTTCAATTGAAGGAGCTTGTCAATGTATTAAATAAAGAGAGGTTCTTTGCTGTGGACACAGAACAACATACTTTGCGATCTTTTCTTGGCTTTACAGCACTAGTTCAGATTTCTACTCAGCAGGAGGATTATTTGATTGACACAATTGCCCTGCATGATTTAATGGACATTCTTCGCCCGGTTTTTGTGAATCCTTTAATTTGTAAAGTGTTTCATGGAGCTGATAATGATGTTGTCTGGTTACAAAGGGATTTTCATATCTATGTTGTTAATCTATTTGATACGTCAAAGGCATGTGAGGTGCTGTCAAAGCCACAGAAATCACTCGCTTATCTACTTGAAACTTATTGTGGTGTTACAACAAATAAATTATACCAGCGTGAAGACTGGAGACAACGTCCCCTCTCAGCAGCAATGATACAGTATGCACAAACAGACGCTCACTATTTGTTATATATTGCAAATTGTTTGATCACTGAACTCAAACAGCTGGACGATGAAAACTCTGGTTCCGATGACAAATTCAATTTTCTTCGTGAGGCTAGTCGACGTTCCAACATGACTTGTTTGCAACTTTTCACAAAAGAGATTGAAGCTTCTCCTGGGGAATCTGCTGCATTATCTTTATTTTCACGATATGTGGGTGGTGAGAGTTCTTCAGTTTCCAGTGAAACCCAGTTTCAGAATTTTGTGAGGCGACTGTGTGCCTGGAGAGATCTGATGGCTCGCGTCCATGATGAGAGCTTGAAATATGTATTATCAGACCAATCAATTGTTGCTTTGGCAAATCAGCCTCCGACTAGTGACTCTGAAATATGCAATACCATAGCTCAGGCTGACATCAATATAGAAATGGGTGCCAATTCTTCCTTCTCTTCTCCATCTCCTATTGTTGGCAGTCACCTAAGTGATGTCTATGATTTGCTTACAGACAATTTAGATAACATTGAAGATATTTATTCAGTAATTCTTCAGAGGTGCCTTGGTCCAAGTGGGAGTTGTCCAGTTTCTCTATTTAATTATTCTTTGTTGGTTAACAGTAATCTGAGACCTATGATGGCCTATAAGCGCCATAATATAAAAAACTCAAAACAGGTTTCTCGGAAAGCTTCTCGAGATTTATTTGTTCAGAAATTCTCTTGTAAGTCTCCTGTTTATCATAATTGTCGGATTTATGCTAATGATGGGCGGCTTCTTTGTTACTGTGATAGGAGGAAGCTTGAATGGTACCTCAGTCGGGATCTGGCAAAACTAATTGATGAAGATCCACCTGCTATAATGCTTCTTTTTGAACCAAAAGGTCGCCCAGAGGACGAAGACAATGATTTCTATATCCAGAGCAAGAAAAACATATGTGTTGGCTGTGGCGAAGGAAATCACTACTTGCGGTACCGGATAATTCCATCATGCTATAGAATACATTTTCCCGAGCATTTGAAGAGCCATCGTTCTCATGATATTGTCCTGCTTTGTGTGGACTGTCATGAAGTTGCTCATGCTGCTGCAGAGAAATACAAGAGAAAGATAGCAGCTGAATTTGGGATTCCTCTCTTTGTTCATAGGGTAATTGATTCAGGACAAGCATCTGAAGTAACCTTTGAAGAGGGAGGTGTTTCTCCCTTACAGTTGCGAACAGCAGCCATGGCTCTTCTGCGCCATGGACCAAGAATGCCTCCCAATCGCCGTGATGAACTGACTGAGATTGTGAAGAGGTATTATGGAGGAAGGGAAATATCTGAGGAAGATTTGGAGAGAGCATTGCTAGTTGGCATGAGTCCGCATGAGAGAAGGCGATTTGAGAAGAAGAGAGGATATTCATTTAAACATTTATTAAGAGGTGCAGCTGTGGAGACAGTACGGGAAAATCATGGTGATTATGCACCCACAATGGGAGGTGCGGACACATCAAATCTTAATGCTCGAGATGGTTCATCTGCAAATAAAGCAACAAGCAATGGAGTAGGTAGAGAACTTGTTATGGTTGAGGATGATGTTGGAAACCCCACTGTATCTTCTGATATAGGAGTTAATGGAAATGTCTCAGTCATCTTAACTGAACATGTGGACACAGATAAAAATTCAGGTTCTAACGAGTTAAGTGCCTATGCTGTAAATCCTGATGATGGCTGTCTGAGCCGAGGAGCTGCAAATGGAATTGATGACTTATCCCCTGGAGATGATGAGTCTGCTCAAGCGAAACATAATTCGAAACAGTCACTCTTGGGACATGGGCCACATGGAAAGCAAGTTGTTGAACATTTACTGAAGGAATATGGTGAAGATGGCATTCGTCAGTTTTGTCAGAGATGGAGACAAGTTTTTGTTGAAGCTATCAAACCACAGTTTCTACCTGCTGGCTGGGACATTAATCACAGTGGTAGAAGGGATTTCGGCGAATTCAGTGTCTACAATCCGGTCCGACAGGCATCTGCAACTACTATTAGCATGTGA 2808 0.4113 MEYRYKMRVAFAIAALAIVSIYFTSRYRSRRKKKYPPSLCYLHSDSKPQYGFKRVLADNSYTVFKHLKVDNSDHERPSNSHPFEAEITLLCEDPQPQLQFSTEIEELKKKDTYVWIDTEFQLKELVNVLNKERFFAVDTEQHTLRSFLGFTALVQISTQQEDYLIDTIALHDLMDILRPVFVNPLICKVFHGADNDVVWLQRDFHIYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVTTNKLYQREDWRQRPLSAAMIQYAQTDAHYLLYIANCLITELKQLDDENSGSDDKFNFLREASRRSNMTCLQLFTKEIEASPGESAALSLFSRYVGGESSSVSSETQFQNFVRRLCAWRDLMARVHDESLKYVLSDQSIVALANQPPTSDSEICNTIAQADINIEMGANSSFSSPSPIVGSHLSDVYDLLTDNLDNIEDIYSVILQRCLGPSGSCPVSLFNYSLLVNSNLRPMMAYKRHNIKNSKQVSRKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLSRDLAKLIDEDPPAIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRKIAAEFGIPLFVHRVIDSGQASEVTFEEGGVSPLQLRTAAMALLRHGPRMPPNRRDELTEIVKRYYGGREISEEDLERALLVGMSPHERRRFEKKRGYSFKHLLRGAAVETVRENHGDYAPTMGGADTSNLNARDGSSANKATSNGVGRELVMVEDDVGNPTVSSDIGVNGNVSVILTEHVDTDKNSGSNELSAYAVNPDDGCLSRGAANGIDDLSPGDDESAQAKHNSKQSLLGHGPHGKQVVEHLLKEYGEDGIRQFCQRWRQVFVEAIKPQFLPAGWDINHSGRRDFGEFSVYNPVRQASATTISM 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0559 935 Pfam 3'-5' exonuclease 113 280 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mibi07g0559 935 ProSiteProfiles HRDC domain profile. 343 423 IPR002121 GO:0003676
Mibi07g0559 935 Gene3D - 46 317 IPR036397 GO:0003676
Mibi07g0559 935 MobiDBLite consensus disorder prediction 833 864 - -
Mibi07g0559 935 MobiDBLite consensus disorder prediction 751 771 - -
Mibi07g0559 935 SUPERFAMILY HRDC-like 346 440 IPR010997 GO:0000166|GO:0044237
Mibi07g0559 935 MobiDBLite consensus disorder prediction 745 771 - -
Mibi07g0559 935 SUPERFAMILY Ribonuclease H-like 47 311 IPR012337 -
Mibi07g0559 935 Pfam HRDC domain 348 390 IPR002121 GO:0003676
Mibi07g0559 935 SMART 35exoneu6 113 281 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mibi07g0559 935 Gene3D HRDC domain 336 440 IPR044876 -
Mibi07g0559 935 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 38 924 IPR045092 GO:0000175|GO:0000467
Mibi07g0559 935 FunFam Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain 46 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0559 Mibi-ChrMibi07 6816661 6824517 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0559 07 6816661 6824517 Mibi07g0559 07 6816661 6824517 ECH