Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0444 ATGGAGATCGGATGGCCGACTAACGTGCGCCATGTTGCGCACGTCACGTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGATGAATTCGAACCTGAAGTCCCCAGAAGGCCCCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACGGAATCCATGCAGCTATCTTTTGACTCCAGAGGGAACAGTGTGCCAACCATTCTGTTATTAATGCAAAGACGCCTATATAGTGAAGGAGGTTTGCAGTCAGAGGGCATATTCAGAATTAATGCAGATAATAGTCAAGAGGAATATGTTAGGGAGCAGTTAAACAAGGGAGTGGTACCTGAAGGCATTGATGTCCATTGCTTAGCAGGACTTATCAAGGCTTGGTTTAGGGAGCTGCCAATAGGCGTTCTGGATTCCTTATCACCAGAGCAGGTAATGAAAAGCCAAACAGAAGAGGAGTGTGCTGAACTAGCAAGGAATCTACCTCCCACTGAAGCTGCCCTCTTGGACTGGGCAATCAATCTGATGGCTGATGTTGTCCAATATGAACATCTCAATAAAATGAATGCACGCAACATTGCTATGGTTTTTGCCCCAAACATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTAAAAACACTGATACTAAGGACACTGAGGGAAAGAAAGGATTCTATAGTTGAATCTTCACCTGGTTTTTATTTAGAGCCCTCTGATGATAATACTAATAGTCACCAGAGCCCTATAATACATTTCTGCCAGCCAGATTCTGCTAAAGATCATTATGAAGAGGCTCAGGCCCTTACAACAGAAAAAACTGTCTCAGAAAGTGATCCTGCCCCTGATTCCTTCCAAGAAACCGACTTAACTGGAGGAGAATCTGGCAGTTTGGGAACAACTTCTGAAAAACCAGTTTGTAATGAGGATTTATATTGTGAGTATCCACCTAAAGGAAATGTTGGAAAGAACAAGACAGGCCAATCAAACAGTTCAAATTCAAGAAAGGGATCCAAGAAAACAAGAGACCAGCAACCTTCAAACCAAGGAATAATGAATGTTGAGAAAACTAAGGGAACTGGTAAAGTGAATCGTATAAATTCAAAATCTGAGAAGGTTGAACCATGGCGGTGA 1149 0.4273 MEIGWPTNVRHVAHVTFDRFNGFLGLPDEFEPEVPRRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQRRLYSEGGLQSEGIFRINADNSQEEYVREQLNKGVVPEGIDVHCLAGLIKAWFRELPIGVLDSLSPEQVMKSQTEEECAELARNLPPTEAALLDWAINLMADVVQYEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLRERKDSIVESSPGFYLEPSDDNTNSHQSPIIHFCQPDSAKDHYEEAQALTTEKTVSESDPAPDSFQETDLTGGESGSLGTTSEKPVCNEDLYCEYPPKGNVGKNKTGQSNSSNSRKGSKKTRDQQPSNQGIMNVEKTKGTGKVNRINSKSEKVEPWR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0444 382 Pfam P21-Rho-binding domain 2 29 IPR000095 -
Mibi07g0444 382 MobiDBLite consensus disorder prediction 323 382 - -
Mibi07g0444 382 SUPERFAMILY GTPase activation domain, GAP 43 222 IPR008936 -
Mibi07g0444 382 CDD RhoGAP 65 221 - -
Mibi07g0444 382 ProSiteProfiles CRIB domain profile. 3 16 IPR000095 -
Mibi07g0444 382 MobiDBLite consensus disorder prediction 236 257 - -
Mibi07g0444 382 FunFam Rho GTPase-activating protein 5 33 226 - -
Mibi07g0444 382 SMART PBD_5 3 37 IPR000095 -
Mibi07g0444 382 Pfam RhoGAP domain 65 199 IPR000198 GO:0007165
Mibi07g0444 382 MobiDBLite consensus disorder prediction 348 369 - -
Mibi07g0444 382 PANTHER MKIAA1688 PROTEIN 1 349 IPR044785 GO:0005096
Mibi07g0444 382 CDD CRIB 1 41 - -
Mibi07g0444 382 Gene3D CRIB domain 1 33 IPR036936 -
Mibi07g0444 382 Gene3D Rho GTPase activation protein 36 232 IPR008936 -
Mibi07g0444 382 MobiDBLite consensus disorder prediction 274 308 - -
Mibi07g0444 382 MobiDBLite consensus disorder prediction 241 257 - -
Mibi07g0444 382 ProSiteProfiles Rho GTPase-activating proteins domain profile. 48 233 IPR000198 GO:0007165
Mibi07g0444 382 SMART RhoGAP_3 62 225 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0444 Mibi-ChrMibi07 5484907 5488274 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0295 01 2883976 2886276 Mibi07g0444 07 5484907 5488274 CCT
Mibi07g0444 07 5484907 5488274 Mibi07g0444 07 5484907 5488274 ECH