Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0378 ATGGCGGCGACTGTTCCCGCCGGCAGGGTTCTCACGGCGGCGACCTTTATGATTGCATTATTTTTATGTGGGACGACGACTGTGACGTGTGAATTTCCGACGATTCTTTCTCTAGAAAGAGGAATTCCTCCATTGAATAATGTTACAAAATTGAGTGAACTCATAGCTTTGGACCATGCTAGACATCGACGCTTGCTTCAATATTCTTCCAATGATTCTGGTTTCTCTCTCCAAGGCACCTATGATCCTTACAAAGTCGGGATTTACTACACAAAGGTACAATTGGGCTCTCCTACAAGAGATTTTCATTTGCAAGTAGACACAGGCAGTAGCCCTCTCTGGGTCACATGTAGCTCTTGTTCTTCCTGCCCCAGCACCACCCAACTTCCAATCGAGCTAAGTTATTTTGATCCTGGAAAATCATCTACATCCTCACCGGCAACATGTTCAGGCTCCATTTGTAACAGTCACTATCAATCCCCCGAAGCCGTTTGTTCCAAAGATAATCGCTGCGCTTACACTTTCGCCTACGCCGATGGGAGTACCACTTCTGGTTACTACATCACTGACCTCTTTCATTTCTCCACCCCAACTTCCAATGCTGCTTCTTCACCTCTCATCTTCGGGTGTAGCACAGAGGTGAGTGGAAGCTTTGTGACGAATGAAAGAGGAGTGGATGGCATATTAGGCCTTGGGCAAGGGGATATTTCAGTCATATCACAACTCTCATCAAAAGGATTAGCCCCAAAAGTGTTCTCTCACTGCCTCCGAGGAGATGAACATGGCGGTGGCACTTTGGTTCTTGGTCAAATTGTGAACCCAAATCTTGTTTTCACTCCTCTCCTTCCTTATTATTCTGGGTTTAATTACAAGTTAGGTCTGATGGGCATGGAAGTGAAGGGCAAAAAGTTAAGGGTTGATCCATCGGATTTTGAAACAACAGTTGTTGATTCTGGAACAACTATGGCGTATCTTCCTGAAGGGGTTTACGAAGCTTTTCTCGATGCGATTACGGCTGCTATTTCAGAAGGATCGCATGATACGGGCATTTACGTTTCATATGGAGCCCGATGTTTCTTACTCATGAAAAGCATTTCTAAGGTTTTCCCTAACGTGAGTTTGAACTTTGCTGGTGGTGCTTCTATGGTTCTTCAGCCCAAGGACTACCTTGTACATCACATGACTTTCAATAACGGTGAAAATGGGTGGTGTATGGGCATTCAGAACATGCCGGGTTCCCAAGGTTTTTCTATTTTAGGAGATATCGTATTAAAAGATAAAATTATAGTTTATGATCTGACTGGCCAACGCATTGGATGGGTTGACTATGACTGCTCGAAGCCCTTCAATGTGTCTACAAAATCAAAGAGCAGTGCATCATCATCAAGTGTGGCCACGTCATGGGATTGGCCCCATAAGACAAGGACCTTAGCCTCCGTATCGTGGATCTGCTTCTTCTTGATTCTTTATCATGTAGAGTTGGATATTTAA 1491 0.444 MAATVPAGRVLTAATFMIALFLCGTTTVTCEFPTILSLERGIPPLNNVTKLSELIALDHARHRRLLQYSSNDSGFSLQGTYDPYKVGIYYTKVQLGSPTRDFHLQVDTGSSPLWVTCSSCSSCPSTTQLPIELSYFDPGKSSTSSPATCSGSICNSHYQSPEAVCSKDNRCAYTFAYADGSTTSGYYITDLFHFSTPTSNAASSPLIFGCSTEVSGSFVTNERGVDGILGLGQGDISVISQLSSKGLAPKVFSHCLRGDEHGGGTLVLGQIVNPNLVFTPLLPYYSGFNYKLGLMGMEVKGKKLRVDPSDFETTVVDSGTTMAYLPEGVYEAFLDAITAAISEGSHDTGIYVSYGARCFLLMKSISKVFPNVSLNFAGGASMVLQPKDYLVHHMTFNNGENGWCMGIQNMPGSQGFSILGDIVLKDKIIVYDLTGQRIGWVDYDCSKPFNVSTKSKSSASSSSVATSWDWPHKTRTLASVSWICFFLILYHVELDI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0378 496 CDD pepsin_A_like_plant 89 445 IPR034161 -
Mibi07g0378 496 SUPERFAMILY Acid proteases 84 448 IPR021109 -
Mibi07g0378 496 Pfam Xylanase inhibitor C-terminal 289 440 IPR032799 -
Mibi07g0378 496 Gene3D Acid Proteases 65 270 IPR021109 -
Mibi07g0378 496 Pfam Xylanase inhibitor N-terminal 89 270 IPR032861 -
Mibi07g0378 496 Gene3D Acid Proteases 271 453 IPR021109 -
Mibi07g0378 496 PANTHER ASPARTYL PROTEASES 48 439 IPR001461 GO:0004190|GO:0006508
Mibi07g0378 496 ProSiteProfiles Peptidase family A1 domain profile. 89 441 IPR033121 -
Mibi07g0378 496 PRINTS Pepsin (A1) aspartic protease family signature 95 115 IPR001461 GO:0004190|GO:0006508
Mibi07g0378 496 PRINTS Pepsin (A1) aspartic protease family signature 417 432 IPR001461 GO:0004190|GO:0006508
Mibi07g0378 496 PRINTS Pepsin (A1) aspartic protease family signature 314 325 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0378 Mibi-ChrMibi07 4604041 4608638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0378 63 447 Miscellaneous Gene Families AT1G44130 28.109 1.81e-38 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0235 01 2267885 2272263 Mibi07g0378 07 4604041 4608638 CCT