Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0247 ATGGCGGCGGCCTCTATGGCAGCATCACGATTATCCCATTACCCCTATCATCATCCTATACTCCAATCTTCGCCGTCCGATTTCCCGCCGCTGACTACCTTCAAGCCGTACGATTCTCATCCCATACGTTACCGGAGCTTTTCCATTCGCGCTTCGCTTCAGGGTGACAGAGAACTCAACAAGAACCCTCAAACTCTAGATTTACCTGTCGCCGATGACTTTTCTAGCGAATTCCTTTCCAAAGACATGCCTGCCCATCCGCGGCCATTGTCTTCTGCTCATGCCTCAAGTTCAGTTTCTGATGGATCTCGCCTTCGTGTTGCATACCAGGGAGTTCATGGCGCTCACAGCGAGTCAGCCGCACAAAAGGCCTACCCAAATTGTGAAGCAGTGCCTTGTGACCAATTTGAGACGGCTTTTGAGGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTACCCATTGAGAACTCTTTAGGAGGGAGCATTCACAGAAATTATGACCTATTACTTCGACACAGGTTGCATATAGTAGGTGAAGTAAAATATGCAGTCCACCATTGTCTGTTGGCCAATCATGGTGTTAAACTTGAGGATTTGAAGCGGGTACTTAGTCATCCACAGGCTCTTGCTCAGTGTGAGGACAGATTGACAAATATGGGGTTGATCAGAGAAGCAGTAGATGACACAGCCGGTGCTGCCAAGCATGTTGCATTCCACAAACTTCGAGATGCAGGAGCAGTTGCTGGTTATGCTGCTGCTGAGATCTATGACTTGAATATACTTGCCCGAGATATTGAGGATGAAAGTGATAATATCACTCGATTTTTAATGTTAGCACGAGAACCTATTATTCCAGGCACAGATAGGCCATTTAAGACCAGCATAGTTTTTTCTTTAGAGGAGGGTCCTGGAGTACTTTTCAAGGCGCTTGCTGTTTTTGCACTGCGAGATATCAACCTCACGAAGATAGAAAGTCGGCCATTGAGGAACCAACCTTTACGTGCATCATCCGACGATAGAAATAGTGGTCCCAAGTACTTCGATTATCTTTTCTATGTGGATTTTGAAGCATCAATGGCTGATCAGAATGCACAAAATGCCCTGAGGCAGCTAAAGGAGTTTGCTACATTCCTGCGAGTGCTTGGGAGTTATCCTGTGGACACAAGTACGGCATAA 1179 0.4656 MAAASMAASRLSHYPYHHPILQSSPSDFPPLTTFKPYDSHPIRYRSFSIRASLQGDRELNKNPQTLDLPVADDFSSEFLSKDMPAHPRPLSSAHASSSVSDGSRLRVAYQGVHGAHSESAAQKAYPNCEAVPCDQFETAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVHHCLLANHGVKLEDLKRVLSHPQALAQCEDRLTNMGLIREAVDDTAGAAKHVAFHKLRDAGAVAGYAAAEIYDLNILARDIEDESDNITRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRDINLTKIESRPLRNQPLRASSDDRNSGPKYFDYLFYVDFEASMADQNAQNALRQLKEFATFLRVLGSYPVDTSTA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0247 392 CDD PBP2_Ct-PDT_like 106 283 - -
Mibi07g0247 392 FunFam Arogenate dehydratase 188 269 - -
Mibi07g0247 392 FunFam Arogenate dehydratase 288 389 - -
Mibi07g0247 392 Pfam Prephenate dehydratase 107 283 IPR001086 GO:0004664|GO:0009094
Mibi07g0247 392 SUPERFAMILY Periplasmic binding protein-like II 106 287 - -
Mibi07g0247 392 ProSitePatterns Prephenate dehydratase signature 1. 257 279 IPR018528 GO:0004664|GO:0009094
Mibi07g0247 392 Gene3D - 288 389 - -
Mibi07g0247 392 ProSiteProfiles Prephenate dehydratase domain profile. 106 281 IPR001086 GO:0004664|GO:0009094
Mibi07g0247 392 Gene3D - 190 269 - -
Mibi07g0247 392 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 63 391 - -
Mibi07g0247 392 CDD ACT_CM-PDT 293 386 - -
Mibi07g0247 392 FunFam Arogenate dehydratase 101 187 - -
Mibi07g0247 392 ProSitePatterns Prephenate dehydratase signature 2. 321 328 IPR018528 GO:0004664|GO:0009094
Mibi07g0247 392 Gene3D - 100 189 - -
Mibi07g0247 392 SUPERFAMILY ACT-like 276 387 IPR045865 -
Mibi07g0247 392 ProSiteProfiles ACT domain profile. 295 386 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0247 Mibi-ChrMibi07 3149171 3155408 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0247 07 3149171 3155408 Mibi07g0247 07 3149171 3155408 ECH