Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0220 ATGTATAGAGCACGAGCTGAAGGCTTAACTTTCACGAAGGAACCATATATTGAGGATGTTGGACCGCGCAGAATCAAGAGCATGCAATTCACTGCATTATCAGAGTCAGAGATCAGTAAAATTGCTGAGGTTCAAGTTGCAAAAGGCTCATACTATGATGAAAAAAGAAAGCCTATTGAGAATGGCTTGTTGGATCCCCGCATGGGTCCTGCTAATAAGAGCTGCACATGTGCAACATGTGATGGGAATTTTACTGACTGTCCAGGGCACTACGGATACTTAAACCTTGCTCTTCCAGTTTTCAATGTTGGATATAAAGAAAAAATTTTGCAAATATTGAAGTGCATTTGTAAGGGCTGTGCTCGTATACTCCTCGATGAAAATTCTTGTAAAGAACGCTTGAAGAAGATGAGAAGCCCCAAAATAGAGCCTTTGAGGAAGATTGCGATAGCTAAAAGTCTTATTGATAAATGCAGTGCCATGACAAGTAGTAAAGCAGTGGTGTGTCGAAGATGTGGATTTATCAATGGTCCAGTGAAGAAGCTTGTGTCTAATCTAGGCATTATTCATGATACTTCCAAATGTATTGATGGCAATGTGAAAGACTTTAGAGCAGCAATTTCTCATACAAGAGAGTCTAATGCTCCCATCAACTTGACTACTCATGTTCTAAACCCTCACAGAGTTCTTTCCCTCTTCAAAAGGATGCTTGATGAGGACTGTGAATTACTTGATCTTGCAGACAGGCCTGAGAAATACATTATGACGAACATGGCTGTCCCACCCATAGCTATACGACCTTCAGTTATAATGGATGGCTCCCAAAGCAATGAAAATGATGCAACAGAAAGGCTAAAGCAAATAATTCAAGCAAATGGTAACCTACGCCATGAGCTACAGGAAGCTAGCGGGGCATTCAAATCTCTGGATGGCTGGGAAATACTTCAAGTTGAGGCTGCTCAGTTCATTAACAGTGATGTGCGTGGCATCCCATTTAATTTGCAACGTGCCAAGCCATTGGCTGGCTTTGTTCAACGTCTTAAAGGAAAGCAGGGGCGTTTCCGTGGCAACTTATCGGGGAAACGTGTTGAATTTACTGGCAGGACAGTCATTTCACCAGATCCTAATCTGAAAATTTCTGAGGTCGCAATACCAATCCATATGGCTCGCATATTGACTTTTCCTGAGTGTGTTTCCCCTCACAACATTGAAAAGTTGAGACAATGCGTGAGAAATGGCCCTGATAAGTATCCTGGTGCAAGGATGTTGAGACATGCTGGTGGTCTGACAAGGTCCTTAAAAATTTCTTTTCGGAAACGCCTGGCAGATGAATTGAGGTATGGTGATATTGTTGAGCGTCATTTAGAAGATGGAGACATTGTTCTTTTCAATAGACAACCAAGCTTGCATCGGATGTCTATCATGTGTCATAGGGCTAGAGTTATGCCTTGGAGAACTCTGAGATTCAACGAATCTGTCTGCAACCCGTATAATGCTGACTTTGATGGTGATGAGATGAATTTACATGTACCACAGACTGAGGAGGCACGGACAGAGGCTGTTTTATTGATGGGGGTGCAAAACAATTTATGCACGCCAAAGAATGGGGAAATTCTGGTTGCCTCTACTCAAGACTTTTTAACCTCCTCCTTTTTGATTACTAGAAAAGATACTTTTTATGATCGTTCTGCTTGTGCACTTATTTGCTCATACATGGGTGATGCCATGGATACTGTTGACCTGCCAACTCCAGCAATTATAAAGCCAGTAGAGCTTTGGAGTGGGAAACAAATATTTAGTGTTCTAATACGCTCTCATGCAAATGTGAGAACCTATGTGAGTCTTACTGTTAAGGAGAAGACCTACAGCACAAAGTTTGATGATAGGAAAAGAGAGTTGAAAACGATGTGTCCTAATGACGGCTTTGTTTATTTTCGCAACAGTGAGTTGATCTCTGGACAACTTGGGAAGGCTACTTTAGGAAATGGAAATAAGGATGGGCTTTTCTCGGTGCTACTAAGAGATTATAAAGCTCATGCTGCAGCCTCTTGCATGAACCGTCTAGCTAAGTTGAGTGCTCGATGGATAGGCAATCATGGGTTCTCCATAGGCATTGATGATGTCCAACCAAAAGTTGAATTGATCATAAAGAAAGATGAAACAATTTCAGATAACTACAAAAAATGTGATGATTTTATCGAATTATTCAATAAAGGAAAGCTAGATCTCAAAGCTGGTTGTGATGCTGCTCAAACATTAGAGGCTCTGATAACTGCTGTATTGAATGGCGTTCGAGATACTGCCGGGAAGGTTTGCATGCAAACACTTGATTGGAGAAATAGTCCCTTGATCATGTCACAGTGTGGTTCCAAAGGATCTCCTATAAATATCAGCCAAATGGTTGCGTGTGTTGGTCAACAGTCAGTTGGGGGTCTTCGAGCCCCCAATGGGTTCATGGATCGGAGTCTTCCTCATTTCCCAAGAAATGCAAAGACCCCTGTAGCTAGAGGTTTTGTAGCCAATTCCTTTTATAATGGATTGTCAGCTACTGAGTTTTTCTTCCATACAATGGGAGGGCGAGAGGGGCTTGTTGATACTGCGGTGAAAACTGCTGACACTGGTTATATGTCTCGTAGATTAATAAAAGCTTTGGAGGATTTGTTTGTCCATTACGACAACACTGTAAGAAACGCTAGTAGTTGTGTAGTCCAATTTTGCTATGGAGATGATGCCATGGATCCAGCTGGCATGGAAGGAAAAGATGGAAAACCTTTGAACTTTGATCGGTTGTTTTTGAAAAGCAAGGCTATATGTCCCAGTGATGGAGATGATGAAATCCTATCCTCCTCTGATGTGTGTGAAGTAGTGCAAGACAAACTGTCAAAAGTTGGTATGTTGAGAGAGAAAGGTGCTTCAGAGGATGATATAAATTCTGAGGTGGGTTGCTCTGCCGACTTCATCAATTGTCTACAATCCTTCATCAGAGATAACATCAGAGTTTTATTAGAAAGAGATGAATCTTCTGTCGATGATGACGCTAGAAATCAGAAAAAAATTATTCAGAGGATCTCTGGTATTACTAGGAGACAGCTTGAGGTTTTCCTGGATATATGTCTTTCTCGATATCGTTCAAAAAGAATTGAGGGTGGAACTCCCATTGGTGTCATTGGTGCTCAAAGTATCGGAGAGCCTGGGACACAGATGACTTTGAAAACTTTCCACTTTGCTGGAGTTGCAAGCATGAATGTTACTCTTGGAGTTCCTCGTATCAAAGAAATAATAAATGGCGCTAAAAGAATCAGCACACCTATTATTACTGCAATACTTGAGAGTGATGATAATGCTAATACTGCGAGGATGGTAAAAGGTCGCATTGAGAAAACAAACTTGGGCCAGATAGCAAAGGGCATAAAAATTGTGATGACGTCAAGATCAGCATCAATTGTTATTACACTTGACATGGAAAGAATCCAAGATGCACAATTGAATATAGATGCTAATATTGTGAGGGAATCAATTTTGCACACTCCAAAATTAAAATTGAAGCCAGAGCACATCAACGTTTTGGATATCAAAAAGCTTGAAGTTGTACCCCAGGATGCAGATAGAAGTAAAATCAATTTTCAACTTAACCATCTAAAAAATTTGCTTCCATCAGTTGTAGTAAAGGGAATCAAGACTGCTGAACGTGTTGTTATCAGTAAAGAAGAAGATAAAGTGACAAAGGTGGAGAAGTTCAAGCTGTTGGTCGAAGGCATGGGCCTTCAAGATGTTATGGGCATTGAGGGAGTTGATGGACGTAAAACTCTGAGTAATCATATCATTGAAGTAGAGCAGACTCTAGGAATTGAAGCAGCTAGAAAGTGTATTATTGAAGAGATAAAATTTACTATGGGAAGCCATGGAATGAGTATAGACATACGCCATATGATGCTTTTGGCTGATGTGATGACCTTCAGGGGGGAAGTCCTTGGAATAACACGATTTGGAATCCAAAAGATGGACAAGAGTGTATTAATGCTAGCATCATTCGAGAAGACTGCAGATCACCTTTTCAATGCTTCTGTGCATGGGAGGGATGACCCGATTGAAGGAGTGACTGAATGCATAATCATGGGCATACCAATTCAGATGGGCACTGGAATGATCAAAGTTAAACAAAGATTGGATCCTCCAGCGCTGCGTCAAGGTGCCGATCCTATTTTGTCTTGA 4212 0.4105 MYRARAEGLTFTKEPYIEDVGPRRIKSMQFTALSESEISKIAEVQVAKGSYYDEKRKPIENGLLDPRMGPANKSCTCATCDGNFTDCPGHYGYLNLALPVFNVGYKEKILQILKCICKGCARILLDENSCKERLKKMRSPKIEPLRKIAIAKSLIDKCSAMTSSKAVVCRRCGFINGPVKKLVSNLGIIHDTSKCIDGNVKDFRAAISHTRESNAPINLTTHVLNPHRVLSLFKRMLDEDCELLDLADRPEKYIMTNMAVPPIAIRPSVIMDGSQSNENDATERLKQIIQANGNLRHELQEASGAFKSLDGWEILQVEAAQFINSDVRGIPFNLQRAKPLAGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKISEVAIPIHMARILTFPECVSPHNIEKLRQCVRNGPDKYPGARMLRHAGGLTRSLKISFRKRLADELRYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAVLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSACALICSYMGDAMDTVDLPTPAIIKPVELWSGKQIFSVLIRSHANVRTYVSLTVKEKTYSTKFDDRKRELKTMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKVELIIKKDETISDNYKKCDDFIELFNKGKLDLKAGCDAAQTLEALITAVLNGVRDTAGKVCMQTLDWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGLRAPNGFMDRSLPHFPRNAKTPVARGFVANSFYNGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLFVHYDNTVRNASSCVVQFCYGDDAMDPAGMEGKDGKPLNFDRLFLKSKAICPSDGDDEILSSSDVCEVVQDKLSKVGMLREKGASEDDINSEVGCSADFINCLQSFIRDNIRVLLERDESSVDDDARNQKKIIQRISGITRRQLEVFLDICLSRYRSKRIEGGTPIGVIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAILESDDNANTARMVKGRIEKTNLGQIAKGIKIVMTSRSASIVITLDMERIQDAQLNIDANIVRESILHTPKLKLKPEHINVLDIKKLEVVPQDADRSKINFQLNHLKNLLPSVVVKGIKTAERVVISKEEDKVTKVEKFKLLVEGMGLQDVMGIEGVDGRKTLSNHIIEVEQTLGIEAARKCIIEEIKFTMGSHGMSIDIRHMMLLADVMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVHGRDDPIEGVTECIIMGIPIQMGTGMIKVKQRLDPPALRQGADPILS 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0220 1403 FunFam DNA-directed RNA polymerase subunit 534 707 - -
Mibi07g0220 1403 FunFam DNA-directed RNA polymerase subunit 16 138 - -
Mibi07g0220 1403 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 17 1388 - -
Mibi07g0220 1403 CDD RNAP_III_RPC1_N 33 896 IPR035697 -
Mibi07g0220 1403 Pfam RNA polymerase Rpb1, domain 4 736 839 IPR007083 GO:0003677|GO:0003899|GO:0006351
Mibi07g0220 1403 PANTHER DNA-DIRECTED RNA POLYMERASE 29 1387 IPR045867 GO:0003899|GO:0006351
Mibi07g0220 1403 Gene3D RNA polymerase II, clamp domain 15 138 IPR044893 -
Mibi07g0220 1403 CDD RNAP_III_Rpc1_C 1041 1383 IPR035698 -
Mibi07g0220 1403 Pfam RNA polymerase Rpb1, domain 2 360 526 IPR000722 GO:0003677|GO:0003899|GO:0006351
Mibi07g0220 1403 Gene3D - 351 533 - -
Mibi07g0220 1403 FunFam DNA-directed RNA polymerase II subunit RPB1 436 533 - -
Mibi07g0220 1403 Gene3D - 826 884 - -
Mibi07g0220 1403 Gene3D RNA polymerase Rpb1, domain 3 534 707 IPR042102 -
Mibi07g0220 1403 SMART rpolaneu7 251 554 IPR006592 GO:0003677|GO:0003899|GO:0006351
Mibi07g0220 1403 FunFam DNA-directed RNA polymerase subunit 1336 1392 - -
Mibi07g0220 1403 FunFam DNA-directed RNA polymerase subunit 711 825 - -
Mibi07g0220 1403 Gene3D - 708 825 IPR038120 -
Mibi07g0220 1403 Gene3D RNA polymerase ii 393 453 - -
Mibi07g0220 1403 Pfam RNA polymerase Rpb1, domain 1 23 358 IPR007080 GO:0003677|GO:0003899|GO:0006351
Mibi07g0220 1403 Pfam RNA polymerase Rpb1, domain 5 846 1338 IPR007081 GO:0003677|GO:0003899|GO:0006351
Mibi07g0220 1403 Pfam RNA polymerase Rpb1, domain 3 529 708 IPR007066 GO:0003677|GO:0003899|GO:0006351
Mibi07g0220 1403 Gene3D - 1338 1383 - -
Mibi07g0220 1403 Gene3D - 885 936 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0220 Mibi-ChrMibi07 2809372 2827333 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0220 07 2809372 2827333 Mibi07g0220 07 2809372 2827333 ECH